FFCP PHASE1:Mm9::chrX:21292160..21292179,+: Difference between revisions
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{{FFCP|EntrezGene=56774|HGNC=|MCL_coexpression_id=1724|UniProt=A1L359,Q9JMA9|association_with_transcript=134bp_to_NM_020049,uc009sur.2_5end|description=CAGE_peak_1_at_Slc6a14_5end|id=chrX:21292160..21292179,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!2.33e-10!17;UBERON:0005181!2.33e-10!17;UBERON:0002224!2.33e-10!17;UBERON:0000915!2.33e-10!17;UBERON:0008947!2.33e-10!17;UBERON:0003258!2.33e-10!17;UBERON:0002048!1.33e-08!14;UBERON:0000117!1.33e-08!14;UBERON:0000171!1.33e-08!14;UBERON:0000170!1.33e-08!14;UBERON:0005597!1.33e-08!14;UBERON:0000118!1.33e-08!14;UBERON:0005153!3.38e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0005178,2.32e-12,17;UBERON:0005181,2.32e-12,17;UBERON:0002224,2.32e-12,17;UBERON:0000915,2.32e-12,17;UBERON:0008947,2.32e-12,17;UBERON:0003258,2.32e-12,17;UBERON:0002048,4.97e-10,14;UBERON:0000117,4.97e-10,14;UBERON:0000171,4.97e-10,14;UBERON:0000170,4.97e-10,14;UBERON:0005597,4.97e-10,14;UBERON:0000118,4.97e-10,14;UBERON:0005153,8.01e-09,17;UBERON:0004119,7.80e-08,118;UBERON:0000925,7.80e-08,118;UBERON:0006595,7.80e-08,118;UBERON:0001007,1.15e-07,116;UBERON:0001555,1.15e-07,116;UBERON:0007026,1.15e-07,116;UBERON:0005157,6.95e-07,20;UBERON:0004921,8.06e-07,114;UBERON:0000160,8.69e-07,31|phase1_expression=1.12104192973356,8.02643437570531,5.0049916332849,0,0.500895729946347,0.16787927191189,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,4.93251082876205,0,0,4.15980299262857,11.0116454912242,12.6331032105304,16.3689558540448,19.8233534071018,7.03086651988583,1.00812051903972,113.969482476827,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93244376368905,0,0,0,3.52108549441701,0,0,0,4.76280290224671,6.08063677140237,7.07734223020697,5.1382745873577,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,68.9649516507052,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,12.416069497302,0,0.459804208866946,0.360124259610698,0.60281927134286,0.816437989815934,0.384341160854549,0.468508622798644,5.17406741478031,0,0.567318240503458,0.175951124163949,0.876782929710299,0,4.87553033131033,3.08673204611915,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,0,0,0.264450566663544,0,0,0.257734922644187,0.605050573870028,2.44615848229357,10.8428606884159,4.2707615539006,8.89374355509659,24.1281800448259,28.8486884459669,31.5841821132975,2.69645822596266,69.5964520596515,67.1106090867218,0,0,0,0,0,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0,0,0.25462585178142,0.575392274901621,0,0,0,1.11642284300551,1.87222603868736,0,0,0,28.2672380954905,0,0.977789858652155,1.01847051465113,5.63256595892405,15.5780819420889,15.4728366575909,46.2466745422983,11.6650006638581,12.8449519996289,13.3942005672289,31.7894830548532,27.1115421529456,37.1748080554485,0,0,0,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,13.5275500837479,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0.643011105094777,1.06404140185364,0.178368817602071,0.329098041204242,0,0.704015124191131,1.90648863777438,2.20528398054962,10.5527201882547,7.10443477461984,3.67908842061751,2.74556391207214,5.41664969158702,1.7488850197791,0,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.648032044930808,1.04544148007234,1.52853794622324,4.72025212346872,6.28166263512553,2.09404753587224,205.958192560659,3.72803587852155,0,0.448549638131936,0.165458490457098,0,0,0.168956125490778,0.234714477291508,0,1.04859344425711,1.44950472495604,1.15212002503146,0,0,0,0,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,1.31256384932592,0.228620419965,0.100826185136841,0,0,0.233753804363138,4.76133805591944,0,0,0.167884616364078,0,5.2551093126331,5.67770035228522,44.8029912275248,7.52358156053045,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.729320151204882,0,0.183843508450014,0.888986911206461,1.03017528619447,1.28367683836726,1.26348605881899,1.52087579934144,2.26351609663291,2.1537546718073,1.34452820050225,1.37845125493472,0,1.15884325944855,2.70072908649187,0.412085900803307,2.20798380201596,0.685738504770831,1.06485483695602,1.1921809497366,1.0174249164263,0.846984423737976,1.26921911837515,1.46342378298218,1.31534855718921,2.44447404922551,1.12228454331548,1.77952527186261,0.985044823755635,1.22769312950907,1.08455788830176,2.12197272079256,1.49886346762768,2.33931608445408,4.29742108096597,1.3390183244819,1.76473135295612,0.927471342481686|short_description=p1@Slc6a14}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:56774 | |||
|HGNC= | |||
|MCL_coexpression_id=1724 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A1L359,uniprot:Q9JMA9 | |||
|association_with_transcript=134bp_to_NM_020049,uc009sur.2_5end | |||
|cluster_id=chrX:21292160..21292179,+ | |||
|description=CAGE_peak_1_at_Slc6a14_5end | |||
|id=chrX:21292160..21292179,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!2.33e-10!17;UBERON:0005181!2.33e-10!17;UBERON:0002224!2.33e-10!17;UBERON:0000915!2.33e-10!17;UBERON:0008947!2.33e-10!17;UBERON:0003258!2.33e-10!17;UBERON:0002048!1.33e-08!14;UBERON:0000117!1.33e-08!14;UBERON:0000171!1.33e-08!14;UBERON:0000170!1.33e-08!14;UBERON:0005597!1.33e-08!14;UBERON:0000118!1.33e-08!14;UBERON:0005153!3.38e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,2.32e-12,17;UBERON:0005181,2.32e-12,17;UBERON:0002224,2.32e-12,17;UBERON:0000915,2.32e-12,17;UBERON:0008947,2.32e-12,17;UBERON:0003258,2.32e-12,17;UBERON:0002048,4.97e-10,14;UBERON:0000117,4.97e-10,14;UBERON:0000171,4.97e-10,14;UBERON:0000170,4.97e-10,14;UBERON:0005597,4.97e-10,14;UBERON:0000118,4.97e-10,14;UBERON:0005153,8.01e-09,17;UBERON:0004119,7.80e-08,118;UBERON:0000925,7.80e-08,118;UBERON:0006595,7.80e-08,118;UBERON:0001007,1.15e-07,116;UBERON:0001555,1.15e-07,116;UBERON:0007026,1.15e-07,116;UBERON:0005157,6.95e-07,20;UBERON:0004921,8.06e-07,114;UBERON:0000160,8.69e-07,31 | |||
|phase1_expression=1.12104192973356,8.02643437570531,5.0049916332849,0,0.500895729946347,0.16787927191189,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,4.93251082876205,0,0,4.15980299262857,11.0116454912242,12.6331032105304,16.3689558540448,19.8233534071018,7.03086651988583,1.00812051903972,113.969482476827,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93244376368905,0,0,0,3.52108549441701,0,0,0,4.76280290224671,6.08063677140237,7.07734223020697,5.1382745873577,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,68.9649516507052,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,12.416069497302,0,0.459804208866946,0.360124259610698,0.60281927134286,0.816437989815934,0.384341160854549,0.468508622798644,5.17406741478031,0,0.567318240503458,0.175951124163949,0.876782929710299,0,4.87553033131033,3.08673204611915,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,0,0,0.264450566663544,0,0,0.257734922644187,0.605050573870028,2.44615848229357,10.8428606884159,4.2707615539006,8.89374355509659,24.1281800448259,28.8486884459669,31.5841821132975,2.69645822596266,69.5964520596515,67.1106090867218,0,0,0,0,0,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0,0,0.25462585178142,0.575392274901621,0,0,0,1.11642284300551,1.87222603868736,0,0,0,28.2672380954905,0,0.977789858652155,1.01847051465113,5.63256595892405,15.5780819420889,15.4728366575909,46.2466745422983,11.6650006638581,12.8449519996289,13.3942005672289,31.7894830548532,27.1115421529456,37.1748080554485,0,0,0,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,13.5275500837479,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0.643011105094777,1.06404140185364,0.178368817602071,0.329098041204242,0,0.704015124191131,1.90648863777438,2.20528398054962,10.5527201882547,7.10443477461984,3.67908842061751,2.74556391207214,5.41664969158702,1.7488850197791,0,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.648032044930808,1.04544148007234,1.52853794622324,4.72025212346872,6.28166263512553,2.09404753587224,205.958192560659,3.72803587852155,0,0.448549638131936,0.165458490457098,0,0,0.168956125490778,0.234714477291508,0,1.04859344425711,1.44950472495604,1.15212002503146,0,0,0,0,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,1.31256384932592,0.228620419965,0.100826185136841,0,0,0.233753804363138,4.76133805591944,0,0,0.167884616364078,0,5.2551093126331,5.67770035228522,44.8029912275248,7.52358156053045,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.729320151204882,0,0.183843508450014,0.888986911206461,1.03017528619447,1.28367683836726,1.26348605881899,1.52087579934144,2.26351609663291,2.1537546718073,1.34452820050225,1.37845125493472,0,1.15884325944855,2.70072908649187,0.412085900803307,2.20798380201596,0.685738504770831,1.06485483695602,1.1921809497366,1.0174249164263,0.846984423737976,1.26921911837515,1.46342378298218,1.31534855718921,2.44447404922551,1.12228454331548,1.77952527186261,0.985044823755635,1.22769312950907,1.08455788830176,2.12197272079256,1.49886346762768,2.33931608445408,4.29742108096597,1.3390183244819,1.76473135295612,0.927471342481686 | |||
|short_description=p1@Slc6a14 | |||
}} |
Revision as of 05:53, 6 August 2015
Short description: | p1@Slc6a14 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc6a14_5end |
Coexpression cluster: | MCL_coexpression_mm9:1724 |
Association with transcript: | 134bp_to_NM_020049, uc009sur.2_5end |
EntrezGene: | 56774 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 2.32e-12 | 17 |
thoracic segment organ | 2.32e-12 | 17 |
thoracic cavity | 2.32e-12 | 17 |
thoracic segment of trunk | 2.32e-12 | 17 |
respiratory primordium | 2.32e-12 | 17 |
endoderm of foregut | 2.32e-12 | 17 |
lung | 4.97e-10 | 14 |
respiratory tube | 4.97e-10 | 14 |
respiration organ | 4.97e-10 | 14 |
pair of lungs | 4.97e-10 | 14 |
lung primordium | 4.97e-10 | 14 |
lung bud | 4.97e-10 | 14 |
epithelial bud | 8.01e-09 | 17 |
endoderm-derived structure | 7.80e-08 | 118 |
endoderm | 7.80e-08 | 118 |
presumptive endoderm | 7.80e-08 | 118 |
digestive system | 1.15e-07 | 116 |
digestive tract | 1.15e-07 | 116 |
primitive gut | 1.15e-07 | 116 |
epithelial fold | 6.95e-07 | 20 |
subdivision of digestive tract | 8.06e-07 | 114 |
intestine | 8.69e-07 | 31 |