FFCP PHASE1:Mm9::chr8:36665968..36665974,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2836|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:36665968..36665974,+|id=chr8:36665968..36665974,+|ontology_enrichment_celltype=CL:0000393!2.74e-23!39;CL:0000211!2.74e-23!39;CL:0000055!2.35e-19!50;CL:0000540!2.36e-18!33;CL:0000047!2.36e-18!33;CL:0000031!2.36e-18!33;CL:0000404!2.36e-18!33;CL:0000221!1.03e-15!44;CL:0000133!1.03e-15!44;CL:0002319!1.78e-15!43;CL:0002321!4.70e-14!70;CL:0000220!4.70e-14!70;CL:0000723!1.90e-12!91;CL:0000048!1.90e-12!91;CL:0000548!2.64e-12!115;CL:0000004!2.64e-12!115;CL:0000255!2.64e-12!115;CL:0000034!9.24e-12!97;CL:0002371!1.78e-11!118;CL:0000144!3.45e-11!121;CL:0000012!3.45e-11!121;CL:0000117!8.52e-11!23;CL:0000337!8.52e-11!23;CL:0000107!3.24e-08!9|ontology_enrichment_celltype_v019_2=CL:0000393,1.32e-17,39;CL:0000211,1.32e-17,39;CL:0000723,6.08e-14,91;CL:0000048,6.08e-14,91;CL:0000034,9.01e-13,97;CL:0000540,9.19e-12,33;CL:0000047,9.19e-12,33;CL:0000031,9.19e-12,33;CL:0000404,9.19e-12,33;CL:0000107,5.10e-11,9;CL:0002321,8.34e-11,70;CL:0000192,7.58e-10,3;CL:0000359,7.58e-10,3;CL:0002539,7.58e-10,3;CL:0000514,7.58e-10,3;CL:0002319,1.95e-08,43;CL:0000680,2.86e-08,6;CL:0000187,2.86e-08,6;CL:0000056,2.86e-08,6;CL:0000221,3.46e-08,44;CL:0000133,3.46e-08,44;CL:0002476,1.41e-07,2;CL:0000222,4.35e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!2.28e-09!11;UBERON:0002410!3.24e-08!9;UBERON:0000073!4.25e-07!75;UBERON:0001016!4.25e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0002410,5.10e-11,9;UBERON:0001135,7.58e-10,3;UBERON:0004237,7.58e-10,3;UBERON:0004695,7.58e-10,3;UBERON:0002111,7.58e-10,3;UBERON:0004178,7.58e-10,3;UBERON:0000010,6.63e-09,11;UBERON:0000947,1.77e-07,4;UBERON:0001637,1.77e-07,4;UBERON:0004573,1.77e-07,4;UBERON:0003509,1.77e-07,4;UBERON:0004571,1.77e-07,4;UBERON:0010191,1.77e-07,4;UBERON:0004572,1.77e-07,4|phase1_expression=1.60148847104794,0,0,0.30246421130683,0,0,0,3.61545305636414,0.140788722151667,5.14941957908386,0,3.19088635981346,0,4.10875891369288,0.666219523631325,0,0,0,0.274228867211478,0,2.72138528483423,0.0992909512008853,0,1.43993180514066,0.45881856213434,0,0.430761996159075,0.430942465371778,1.71021077510736,0,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,3.02152363141385,2.53442328048786,2.20256102594018,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0.514518872071894,1.71920063963254,0.515672092277442,0,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0,0.285650984403804,0.441737081903227,0.367472397644862,0.287536413054709,0.919218786610021,0,0.766124028511126,1.0752457327937,0.263772575460388,0.365950574409639,0.52091337055676,0.837548997004143,4.50210088025344,1.22238598221448,1.17851434189467,1.28134512719193,0.745597783301202,0.681535739998656,0.377857800533928,0,0,0.679971333707751,1.61910957491345,0,0,1.40444420131752,0.681721290312231,0.259786004602869,0.35333957451034,0.14084341977668,0,2.54805239706646,0,0,0,0,1.1418387971906,0,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0.0680364991513279,0.2562274405697,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0,0,0,0.493679549740441,0.164167464079095,0,0,0,0,0,0,0,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,2.87536413054709,0,0,0,0,0,0,0.189491411770485,0,0,0,0.670025029767263,0,0,0,0,0,0.163863314715738,0.172684981865896,0.144649058581512,6.03165135757089,3.26343410291226,0,0,0,0,0,0,2.2085575359138,0.780877488593277,2.15423397732799,1.43381278771531,1.78238939265915,0.283076530788832,1.21443210502468,2.04579100537918,0.790575555893047,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,0,0.170870880797853,0,0,0,0.27338845544205,0.228778173206523,0,0.139951452323658,0,0,0,0,0.324016022465404,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0.360586348559907,0.147689527174577,0.100966449948148,0.304827226619999,0.100826185136841,0,0,0,0.226730383615211,0.221985953374065,0,0,0,0,0,0,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr8:36665968..36665974,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2836 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:36665968..36665974,+ | |||
|description=CAGE_peak_at_chr8:36665968..36665974,+ | |||
|id=chr8:36665968..36665974,+ | |||
|ontology_enrichment_celltype=CL:0000393!2.74e-23!39;CL:0000211!2.74e-23!39;CL:0000055!2.35e-19!50;CL:0000540!2.36e-18!33;CL:0000047!2.36e-18!33;CL:0000031!2.36e-18!33;CL:0000404!2.36e-18!33;CL:0000221!1.03e-15!44;CL:0000133!1.03e-15!44;CL:0002319!1.78e-15!43;CL:0002321!4.70e-14!70;CL:0000220!4.70e-14!70;CL:0000723!1.90e-12!91;CL:0000048!1.90e-12!91;CL:0000548!2.64e-12!115;CL:0000004!2.64e-12!115;CL:0000255!2.64e-12!115;CL:0000034!9.24e-12!97;CL:0002371!1.78e-11!118;CL:0000144!3.45e-11!121;CL:0000012!3.45e-11!121;CL:0000117!8.52e-11!23;CL:0000337!8.52e-11!23;CL:0000107!3.24e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.32e-17,39;CL:0000211,1.32e-17,39;CL:0000723,6.08e-14,91;CL:0000048,6.08e-14,91;CL:0000034,9.01e-13,97;CL:0000540,9.19e-12,33;CL:0000047,9.19e-12,33;CL:0000031,9.19e-12,33;CL:0000404,9.19e-12,33;CL:0000107,5.10e-11,9;CL:0002321,8.34e-11,70;CL:0000192,7.58e-10,3;CL:0000359,7.58e-10,3;CL:0002539,7.58e-10,3;CL:0000514,7.58e-10,3;CL:0002319,1.95e-08,43;CL:0000680,2.86e-08,6;CL:0000187,2.86e-08,6;CL:0000056,2.86e-08,6;CL:0000221,3.46e-08,44;CL:0000133,3.46e-08,44;CL:0002476,1.41e-07,2;CL:0000222,4.35e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!2.28e-09!11;UBERON:0002410!3.24e-08!9;UBERON:0000073!4.25e-07!75;UBERON:0001016!4.25e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,5.10e-11,9;UBERON:0001135,7.58e-10,3;UBERON:0004237,7.58e-10,3;UBERON:0004695,7.58e-10,3;UBERON:0002111,7.58e-10,3;UBERON:0004178,7.58e-10,3;UBERON:0000010,6.63e-09,11;UBERON:0000947,1.77e-07,4;UBERON:0001637,1.77e-07,4;UBERON:0004573,1.77e-07,4;UBERON:0003509,1.77e-07,4;UBERON:0004571,1.77e-07,4;UBERON:0010191,1.77e-07,4;UBERON:0004572,1.77e-07,4 | |||
|phase1_expression=1.60148847104794,0,0,0.30246421130683,0,0,0,3.61545305636414,0.140788722151667,5.14941957908386,0,3.19088635981346,0,4.10875891369288,0.666219523631325,0,0,0,0.274228867211478,0,2.72138528483423,0.0992909512008853,0,1.43993180514066,0.45881856213434,0,0.430761996159075,0.430942465371778,1.71021077510736,0,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,3.02152363141385,2.53442328048786,2.20256102594018,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0.514518872071894,1.71920063963254,0.515672092277442,0,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0,0.285650984403804,0.441737081903227,0.367472397644862,0.287536413054709,0.919218786610021,0,0.766124028511126,1.0752457327937,0.263772575460388,0.365950574409639,0.52091337055676,0.837548997004143,4.50210088025344,1.22238598221448,1.17851434189467,1.28134512719193,0.745597783301202,0.681535739998656,0.377857800533928,0,0,0.679971333707751,1.61910957491345,0,0,1.40444420131752,0.681721290312231,0.259786004602869,0.35333957451034,0.14084341977668,0,2.54805239706646,0,0,0,0,1.1418387971906,0,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0.0680364991513279,0.2562274405697,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0,0,0,0.493679549740441,0.164167464079095,0,0,0,0,0,0,0,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,2.87536413054709,0,0,0,0,0,0,0.189491411770485,0,0,0,0.670025029767263,0,0,0,0,0,0.163863314715738,0.172684981865896,0.144649058581512,6.03165135757089,3.26343410291226,0,0,0,0,0,0,2.2085575359138,0.780877488593277,2.15423397732799,1.43381278771531,1.78238939265915,0.283076530788832,1.21443210502468,2.04579100537918,0.790575555893047,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,0,0.170870880797853,0,0,0,0.27338845544205,0.228778173206523,0,0.139951452323658,0,0,0,0,0.324016022465404,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0.360586348559907,0.147689527174577,0.100966449948148,0.304827226619999,0.100826185136841,0,0,0,0.226730383615211,0.221985953374065,0,0,0,0,0,0,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr8:36665968..36665974,+ | |||
}} |
Latest revision as of 09:21, 6 August 2015
Short description: | p@chr8:36665968..36665974, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:36665968..36665974, + |
Coexpression cluster: | MCL_coexpression_mm9:2836 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.32e-17 | 39 |
electrically active cell | 1.32e-17 | 39 |
somatic stem cell | 6.08e-14 | 91 |
multi fate stem cell | 6.08e-14 | 91 |
stem cell | 9.01e-13 | 97 |
neuron | 9.19e-12 | 33 |
neuronal stem cell | 9.19e-12 | 33 |
neuroblast | 9.19e-12 | 33 |
electrically signaling cell | 9.19e-12 | 33 |
autonomic neuron | 5.10e-11 | 9 |
embryonic cell | 8.34e-11 | 70 |
smooth muscle cell | 7.58e-10 | 3 |
vascular associated smooth muscle cell | 7.58e-10 | 3 |
aortic smooth muscle cell | 7.58e-10 | 3 |
smooth muscle myoblast | 7.58e-10 | 3 |
neural cell | 1.95e-08 | 43 |
muscle precursor cell | 2.86e-08 | 6 |
muscle cell | 2.86e-08 | 6 |
myoblast | 2.86e-08 | 6 |
ectodermal cell | 3.46e-08 | 44 |
neurectodermal cell | 3.46e-08 | 44 |
bone marrow macrophage | 1.41e-07 | 2 |
mesodermal cell | 4.35e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 5.10e-11 | 9 |
smooth muscle tissue | 7.58e-10 | 3 |
blood vessel smooth muscle | 7.58e-10 | 3 |
arterial system smooth muscle | 7.58e-10 | 3 |
artery smooth muscle tissue | 7.58e-10 | 3 |
aorta smooth muscle tissue | 7.58e-10 | 3 |
peripheral nervous system | 6.63e-09 | 11 |
aorta | 1.77e-07 | 4 |
artery | 1.77e-07 | 4 |
systemic artery | 1.77e-07 | 4 |
arterial blood vessel | 1.77e-07 | 4 |
systemic arterial system | 1.77e-07 | 4 |
aortic system | 1.77e-07 | 4 |
arterial system | 1.77e-07 | 4 |