FFCP PHASE2:Hg19::chr9:139922671..139922697,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:20 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:32 |TSSclassifie...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=20 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=32 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9BZC7 | ||
|association_with_transcript=-29bp_to_ENST00000341511_5end | |association_with_transcript=-29bp_to_ENST00000341511_5end | ||
|cluster_id=chr9:139922671..139922697,- | |cluster_id=chr9:139922671..139922697,- |
Latest revision as of 15:17, 16 September 2015
Short description: | p1@ABCA2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ABCA2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -29bp_to_ENST00000341511_5end |
EntrezGene: | ABCA2 |
HGNC: | 32 |
UniProt: | Q9BZC7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@ABCA2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neural tube | 4.93e-25 | 56 |
neural rod | 4.93e-25 | 56 |
future spinal cord | 4.93e-25 | 56 |
neural keel | 4.93e-25 | 56 |
adult organism | 7.80e-24 | 114 |
regional part of nervous system | 4.39e-23 | 53 |
regional part of brain | 4.39e-23 | 53 |
brain | 1.21e-21 | 68 |
future brain | 1.21e-21 | 68 |
central nervous system | 5.70e-21 | 81 |
Showing 1 to 10 of 42 entries