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FFCP PHASE2:Hg19::chr9:139922671..139922697,-: Difference between revisions

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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:20 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:32 |TSSclassifie...")
 
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|DHSsupport=supported   
|DHSsupport=supported   
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=entrezgene:20
|EntrezGene=20
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=HGNC:32
|HGNC=32
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=uniprot:Q9BZC7
|UniProt=Q9BZC7
|association_with_transcript=-29bp_to_ENST00000341511_5end
|association_with_transcript=-29bp_to_ENST00000341511_5end
|cluster_id=chr9:139922671..139922697,-
|cluster_id=chr9:139922671..139922697,-

Latest revision as of 15:17, 16 September 2015

Short description:p1@ABCA2
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_ABCA2_5end
Coexpression cluster:C4_optic_corpus_substantia_medulla_spinal_thalamus_globus
Association with transcript: -29bp_to_ENST00000341511_5end
EntrezGene:ABCA2
HGNC: 32
UniProt: Q9BZC7
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data