FFCP PHASE2:Hg19::chr5:169724873..169724889,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:3937 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:6529 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=3937 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=6529 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q13094 | ||
|association_with_transcript=-51bp_to_NM_005565,uc003man.1,uc011det.1_5end | |association_with_transcript=-51bp_to_NM_005565,uc003man.1,uc011det.1_5end | ||
|cluster_id=chr5:169724873..169724889,- | |cluster_id=chr5:169724873..169724889,- |
Latest revision as of 21:30, 16 September 2015
Short description: | p4@LCP2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LCP2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -51bp_to_NM_005565, uc003man.1, uc011det.1_5end |
EntrezGene: | LCP2 |
HGNC: | 6529 |
UniProt: | Q13094 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@LCP2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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myeloid leukocyte | 6.00e-92 | 72 |
leukocyte | 4.53e-89 | 136 |
hematopoietic stem cell | 8.34e-87 | 168 |
hematopoietic cell | 8.04e-85 | 177 |
hematopoietic oligopotent progenitor cell | 7.07e-81 | 161 |
hematopoietic multipotent progenitor cell | 7.07e-81 | 161 |
defensive cell | 1.04e-78 | 48 |
phagocyte | 1.04e-78 | 48 |
myeloid cell | 1.53e-78 | 108 |
common myeloid progenitor | 1.53e-78 | 108 |
Showing 1 to 10 of 38 entries
Ontology term | p-value | n |
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hematopoietic system | 2.29e-71 | 98 |
blood island | 2.29e-71 | 98 |
bone marrow | 2.16e-64 | 76 |
hemolymphoid system | 6.05e-63 | 108 |
bone element | 1.88e-58 | 82 |
immune system | 1.33e-53 | 93 |
skeletal element | 9.17e-52 | 90 |
skeletal system | 6.59e-45 | 100 |
connective tissue | 1.73e-26 | 371 |
lateral plate mesoderm | 2.19e-25 | 203 |
Showing 1 to 10 of 17 entries