FFCP PHASE2:Hg19::chr5:1883090..1883121,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:50805 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:6129 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=50805 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=6129 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P78413 | ||
|association_with_transcript=-210bp_to_ENST00000231357,NM_016358,uc003jcz.2,uc011cmf.1_5end | |association_with_transcript=-210bp_to_ENST00000231357,NM_016358,uc003jcz.2,uc011cmf.1_5end | ||
|cluster_id=chr5:1883090..1883121,- | |cluster_id=chr5:1883090..1883121,- |
Latest revision as of 12:21, 17 September 2015
Short description: | p6@IRX4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_IRX4_5end |
Coexpression cluster: | NA |
Association with transcript: | -210bp_to_ENST00000231357, NM_016358, uc003jcz.2, uc011cmf.1_5end |
EntrezGene: | IRX4 |
HGNC: | 6129 |
UniProt: | P78413 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p6@IRX4 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelial cell of cervix | 7.49e-09 | 2 |
Showing 1 to 1 of 1 entries
Ontology term | p-value | n |
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umbilical cord | 5.65e-25 | 10 |
blastocyst | 5.65e-25 | 10 |
blastula | 5.65e-25 | 10 |
bilaminar disc | 5.65e-25 | 10 |
inner cell mass | 5.65e-25 | 10 |
cleaving embryo | 5.65e-25 | 10 |
connecting stalk | 5.65e-25 | 10 |
inner cell mass derived epiblast | 5.65e-25 | 10 |
extraembryonic mesoderm | 5.65e-25 | 10 |
extraembryonic structure | 1.31e-10 | 24 |
Showing 1 to 10 of 16 entries
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.53e-17 | 14 |
islet cell tumor | 8.86e-17 | 1 |
endocrine pancreas cancer | 8.86e-17 | 1 |
pancreatic endocrine carcinoma | 8.86e-17 | 1 |
thoracic cancer | 4.51e-16 | 4 |
breast cancer | 4.51e-16 | 4 |
Showing 1 to 6 of 6 entries