FFCP PHASE1:Hg19::chr7:116166407..116166423,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=857 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=1527 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=A9XTE5,Q2TNI1,Q59E85,Q03135 | ||
|association_with_transcript=0bp_to_NM_001172897,uc003vih.2,uc010lkf.1_5end | |association_with_transcript=0bp_to_NM_001172897,uc003vih.2,uc010lkf.1_5end | ||
|cluster_id=chr7:116166407..116166423,+ | |cluster_id=chr7:116166407..116166423,+ | ||
Latest revision as of 07:29, 25 September 2015
| Short description: | p1@CAV1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_CAV1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_NM_001172897, uc003vih.2, uc010lkf.1_5end |
| EntrezGene: | CAV1 |
| HGNC: | 1527 |
| UniProt: | A9XTE5Q2TNI1Q59E85Q03135 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p1@CAV1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fibroblast | 5.67e-20 | 76 |
| skin fibroblast | 5.66e-12 | 23 |
| mesodermal cell | 2.14e-11 | 121 |
| embryonic cell | 3.23e-11 | 250 |
| muscle precursor cell | 3.53e-10 | 58 |
| myoblast | 3.53e-10 | 58 |
| multi-potent skeletal muscle stem cell | 3.53e-10 | 58 |
| muscle cell | 9.48e-09 | 55 |
| fat cell | 2.91e-08 | 15 |
| electrically responsive cell | 3.02e-07 | 61 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| surface structure | 9.23e-19 | 99 |
| multilaminar epithelium | 6.45e-14 | 83 |
| somite | 2.30e-13 | 71 |
| presomitic mesoderm | 2.30e-13 | 71 |
| presumptive segmental plate | 2.30e-13 | 71 |
| dermomyotome | 2.30e-13 | 71 |
| trunk paraxial mesoderm | 2.30e-13 | 71 |
| integument | 3.10e-13 | 46 |
| integumental system | 3.10e-13 | 46 |
| dense mesenchyme tissue | 3.87e-13 | 73 |
Showing 1 to 10 of 26 entries
