FFCP PHASE1:Hg19::chr1:154941364..154941368,-
From FANTOM5_SSTAR
Short description: | p29@SHC1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_29_at_SHC1_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | 0bp_to_ENST00000414115_5end |
EntrezGene: | SHC1 |
HGNC: | 10840 |
UniProt: | Q5T188 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p29@SHC1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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Merkel cell | 2.34e-79 | 2 |
keratinocyte | 1.44e-32 | 5 |
stratified squamous epithelial cell | 2.38e-27 | 6 |
keratin accumulating cell | 2.38e-27 | 6 |
stratified epithelial cell | 2.38e-27 | 6 |
keratinizing barrier epithelial cell | 2.38e-27 | 6 |
epithelial fate stem cell | 2.38e-27 | 6 |
stratified epithelial stem cell | 2.38e-27 | 6 |
surface ectodermal cell | 2.38e-27 | 6 |
epidermal cell | 1.24e-18 | 9 |
Ontology term | p-value | n |
---|---|---|
pineal body | 6.96e-21 | 2 |
regional part of epithalamus | 6.96e-21 | 2 |
secretory circumventricular organ | 6.96e-21 | 2 |
circumventricular organ | 6.96e-21 | 2 |
epithalamus | 6.96e-21 | 2 |
cartilage tissue | 1.40e-14 | 3 |
skeletal tissue | 1.40e-14 | 3 |
skin epidermis | 1.27e-11 | 15 |
outer epithelium | 1.27e-11 | 15 |
enveloping layer of ectoderm | 1.27e-11 | 15 |
Ontology term | p-value | n |
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chondrosarcoma | 9.91e-41 | 1 |
extraosseous chondrosarcoma | 9.91e-41 | 1 |
myxoid chondrosarcoma | 9.91e-41 | 1 |
extraskeletal myxoid chondrosarcoma | 9.91e-41 | 1 |
connective tissue cancer | 5.92e-08 | 6 |
musculoskeletal system cancer | 5.92e-08 | 6 |
neuroendocrine tumor | 6.34e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.