FFCP PHASE2:Mm9::chr8:12395874..12395885,+
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Short description: | p2@Sox1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sox1_5end |
Coexpression cluster: | MCL_coexpression_mm9:443 |
Association with transcript: | 355bp_to_NM_009233, uc009kwa.2_5end |
EntrezGene: | 20664 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@Sox1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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CNS neuron (sensu Vertebrata) | 9.35e-33 | 23 |
neuroblast (sensu Vertebrata) | 9.35e-33 | 23 |
neural cell | 2.35e-23 | 43 |
ectodermal cell | 1.22e-22 | 44 |
neurectodermal cell | 1.22e-22 | 44 |
neuron | 9.44e-21 | 33 |
neuronal stem cell | 9.44e-21 | 33 |
neuroblast | 9.44e-21 | 33 |
electrically signaling cell | 9.44e-21 | 33 |
electrically responsive cell | 1.56e-16 | 39 |
Showing 1 to 10 of 13 entries
Ontology term | p-value | n |
---|---|---|
central nervous system | 6.66e-59 | 73 |
regional part of nervous system | 1.17e-58 | 54 |
nervous system | 5.53e-57 | 75 |
neural tube | 7.74e-55 | 52 |
neural rod | 7.74e-55 | 52 |
future spinal cord | 7.74e-55 | 52 |
neural keel | 7.74e-55 | 52 |
brain | 1.49e-48 | 47 |
future brain | 1.49e-48 | 47 |
regional part of brain | 7.11e-47 | 46 |
Showing 1 to 10 of 64 entries