FFCP PHASE1:Mm9::chr7:99890142..99890225,+
From FANTOM5_SSTAR
Short description: | p1@Rab30 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rab30_5end |
Coexpression cluster: | MCL_coexpression_mm9:361 |
Association with transcript: | 0bp_to_NM_029494, uc009iif.1_5end |
EntrezGene: | Rab30 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@Rab30 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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CNS neuron (sensu Vertebrata) | 2.30e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.30e-08 | 23 |
electrically responsive cell | 1.69e-07 | 39 |
electrically active cell | 1.69e-07 | 39 |
neuron | 8.65e-07 | 33 |
neuronal stem cell | 8.65e-07 | 33 |
neuroblast | 8.65e-07 | 33 |
electrically signaling cell | 8.65e-07 | 33 |
Ontology term | p-value | n |
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neurectoderm | 5.59e-20 | 64 |
neural plate | 5.59e-20 | 64 |
presumptive neural plate | 5.59e-20 | 64 |
regional part of nervous system | 2.89e-18 | 54 |
ecto-epithelium | 1.45e-17 | 73 |
neural tube | 4.10e-17 | 52 |
neural rod | 4.10e-17 | 52 |
future spinal cord | 4.10e-17 | 52 |
neural keel | 4.10e-17 | 52 |
ectoderm-derived structure | 3.42e-16 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.