FFCP PHASE1:Mm9::chr15:89330500..89330539,+
From FANTOM5_SSTAR
Short description: | p3@Shank3 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Shank3_5end |
Coexpression cluster: | MCL_coexpression_mm9:189 |
Association with transcript: | -14bp_to_ENSMUST00000135214_5end |
EntrezGene: | Shank3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@Shank3 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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CNS neuron (sensu Vertebrata) | 2.23e-17 | 23 |
neuroblast (sensu Vertebrata) | 2.23e-17 | 23 |
neural cell | 2.42e-12 | 43 |
ectodermal cell | 7.09e-12 | 44 |
neurectodermal cell | 7.09e-12 | 44 |
neuron | 3.98e-10 | 33 |
neuronal stem cell | 3.98e-10 | 33 |
neuroblast | 3.98e-10 | 33 |
electrically signaling cell | 3.98e-10 | 33 |
electrically responsive cell | 1.21e-07 | 39 |
Ontology term | p-value | n |
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central nervous system | 6.21e-28 | 73 |
regional part of nervous system | 6.60e-28 | 54 |
nervous system | 9.22e-27 | 75 |
gray matter | 2.03e-26 | 34 |
neural tube | 1.52e-23 | 52 |
neural rod | 1.52e-23 | 52 |
future spinal cord | 1.52e-23 | 52 |
neural keel | 1.52e-23 | 52 |
ectoderm-derived structure | 2.27e-21 | 95 |
ectoderm | 2.27e-21 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.