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UBERON:0001016

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Name:nervous system
Definition:"a network of specialized cells that communicate information about an organism's surroundings and itself[Wikipedia]." [ISBN:0-14-051288-8, ISBN:3110148986, NLM:nervous+system, WB:rynl, Wikipedia:Nervous_system, ZFIN:curator]
Xrefs:
links:

AAO:0000324
BILA:0000079
BTO:0001484
EFO:0000802
EHDAA:826
EHDAA2:0001246
EMAPA:16469
EV:0100162
FBbt:00005093
FMA:7157
GAID:466
[ 200px-Nervous_system_diagram.png 200px-Nervous_system_diagram.png]
MA:0000016
MAT:0000026
MESH:A.08
MIAA:0000026
ncithesaurus:Nervous_System
NIF_GrossAnatomy:birnlex_844
OpenCyc:Mx4rvViT_pwpEbGdrcN5Y29ycA
SCTID:278196006
TAO:0000396
VHOG:0000402
WBbt:0005735
XAO:0000177

ZFA:0000396
Synonyms: "nerve net" NARROW [Wikipedia:Nerve_net]
"Nervensystem" RELATED [BTO:0001484]
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FBbt_00005093-FMA_7157-MA_0000016-MIAA_0000026-WBbt_0005735-XAO_0000177-ZFA_0000396
Subset: uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000467(anatomical system),UBERON:0004121(ectoderm-derived structure)
disjoint_from:UBERON:0001033(gustatory system),UBERON:0001434(skeletal system),UBERON:0002204(musculoskeletal system),UBERON:0002294(biliary system),UBERON:0002330(exocrine system),UBERON:0002390(hematopoietic system),UBERON:0002405(immune system),UBERON:0002416(integumental system),UBERON:0002423(hepatobiliary system),UBERON:0004456(entire sense organ system)
develops_from:UBERON:0000924(ectoderm)



Children

disjoint from:UBERON:0000949 (endocrine system),UBERON:0000990 (reproductive system),UBERON:0001004 (respiratory system),UBERON:0001007 (digestive system),UBERON:0001008 (renal system),UBERON:0001009 (circulatory system)
part of:UBERON:0000010 (peripheral nervous system),UBERON:0000045 (ganglion),UBERON:0000073 (regional part of nervous system),UBERON:0000121 (perineurium),UBERON:0000122 (neuron projection bundle),UBERON:0001017 (central nervous system),UBERON:0001049 (neural tube),UBERON:0001810 (nerve plexus),CL:0002319 (neural cell),UBERON:0002464 (nerve trunk),UBERON:0003210 (blood-cerebrospinal fluid barrier),UBERON:0003714 (neural tissue),UBERON:0004732 (segmental subdivision of nervous system),UBERON:0005358 (ventricle of nervous system),UBERON:0010133 (neuroendocrine gland)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001016 (nervous system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.42e-121FFCP PHASE1:Hg19::chr2:210526233..210526258,+#_7733a6929c09531e052cff68045b2882p9@MAP2
1.42e-121FFCP PHASE2:Hg19::chr2:210526233..210526258,+#_7733a6929c09531e052cff68045b2882p9@MAP2
1.35e-120FFCP PHASE1:Hg19::chr12:106976678..106976708,+#_3f90e3d9aac382b99831c02b07873bf4p2@RFX4
1.35e-120FFCP PHASE2:Hg19::chr12:106976678..106976708,+#_3f90e3d9aac382b99831c02b07873bf4p2@RFX4
5.29e-119FFCP PHASE1:Hg19::chr5:11588907..11588967,-#_71763cea5ce6c5e10e64dc4283454b92p3@CTNND2
5.29e-119FFCP PHASE2:Hg19::chr5:11588907..11588967,-#_71763cea5ce6c5e10e64dc4283454b92p3@CTNND2
4.14e-117FFCP PHASE1:Hg19::chr12:106976774..106976788,+#_7b94eae42395a8ae74714c47ad111164p1@RFX4
4.14e-117FFCP PHASE2:Hg19::chr12:106976774..106976788,+#_7b94eae42395a8ae74714c47ad111164p1@RFX4
4.41e-117FFCP PHASE2:Hg19::chr2:210526166..210526232,+#_f64dec3f6abdc3bebd6711d3e97d5e23p5@MAP2
4.41e-117FFCP PHASE1:Hg19::chr2:210526166..210526232,+#_f64dec3f6abdc3bebd6711d3e97d5e23p5@MAP2
1.88e-115FFCP PHASE2:Hg19::chrX:13835398..13835429,-#_f9ed0e02989af0cf7351e02e8f549fc3p6@GPM6B
1.88e-115FFCP PHASE1:Hg19::chrX:13835398..13835429,-#_f9ed0e02989af0cf7351e02e8f549fc3p6@GPM6B
4.82e-115FFCP PHASE1:Hg19::chr17:42984601..42984636,-#_152476be02968aeb0df57001aaeec5f4p2@GFAP
4.82e-115FFCP PHASE2:Hg19::chr17:42984601..42984636,-#_152476be02968aeb0df57001aaeec5f4p2@GFAP
3.39e-114FFCP PHASE2:Hg19::chr3:181417353..181417371,+#_b6bcbfd0c57fd1be55b337b87867ac73p1@SOX2-OT
3.39e-114FFCP PHASE1:Hg19::chr3:181417353..181417371,+#_b6bcbfd0c57fd1be55b337b87867ac73p1@SOX2-OT
3.34e-113FFCP PHASE1:Hg19::chr3:47933982..47934047,-#_4f62ca27c7cfbb3ed5e6b67b45926b76p3@MAP4
3.34e-113FFCP PHASE2:Hg19::chr3:47933982..47934047,-#_4f62ca27c7cfbb3ed5e6b67b45926b76p3@MAP4
4.45e-113FFCP PHASE1:Hg19::chr4:176733632..176733692,-#_0147e6c12a211c1284158e3a724a1948p9@GPM6A
4.45e-113FFCP PHASE2:Hg19::chr4:176733632..176733692,-#_0147e6c12a211c1284158e3a724a1948p9@GPM6A
6.14e-113FFCP PHASE2:Hg19::chr6:56716896..56716928,-#_ea6beaabc29dc4be9e732ca825b78021p8@DST
6.14e-113FFCP PHASE1:Hg19::chr6:56716896..56716928,-#_ea6beaabc29dc4be9e732ca825b78021p8@DST
1.61e-112FFCP PHASE2:Hg19::chr17:42988700..42988738,-#_5f8a8d52087c7e1254ef03aac6fc7a78p3@GFAP
1.61e-112FFCP PHASE1:Hg19::chr17:42988700..42988738,-#_5f8a8d52087c7e1254ef03aac6fc7a78p3@GFAP
1.92e-112FFCP PHASE1:Hg19::chr1:84630574..84630602,+#_1c095a1e12b62bcd67b2fc1fbb1af547p9@PRKACB
1.92e-112FFCP PHASE2:Hg19::chr1:84630574..84630602,+#_1c095a1e12b62bcd67b2fc1fbb1af547p9@PRKACB
1.95e-112FFCP PHASE2:Hg19::chr4:176733558..176733609,-#_df7c5d79c5f66862c30a36ce13fe9ab8p7@GPM6A
1.95e-112FFCP PHASE1:Hg19::chr4:176733558..176733609,-#_df7c5d79c5f66862c30a36ce13fe9ab8p7@GPM6A
4.15e-112FFCP PHASE1:Hg19::chr5:87980761..87980821,-#_21db595175900f9ae3b6ed167ec94e27p4@LINC00461
4.15e-112FFCP PHASE2:Hg19::chr5:87980761..87980821,-#_21db595175900f9ae3b6ed167ec94e27p4@LINC00461
1.92e-111FFCP PHASE1:Hg19::chr17:54230819..54230848,+#_554c668bf3e9f0c04e4c50ea334ae3a8p1@ANKFN1
1.92e-111FFCP PHASE2:Hg19::chr11:35440898..35440916,-#_554c668bf3e9f0c04e4c50ea334ae3a8p2@SLC1A2
1.92e-111FFCP PHASE2:Hg19::chr17:54230819..54230848,+#_554c668bf3e9f0c04e4c50ea334ae3a8p1@ANKFN1
1.92e-111FFCP PHASE1:Hg19::chr11:35440898..35440916,-#_554c668bf3e9f0c04e4c50ea334ae3a8p2@SLC1A2
2.68e-111FFCP PHASE1:Hg19::chr2:210444267..210444287,+#_4da689edf826884cebfac223d072c2a6p7@MAP2
2.68e-111FFCP PHASE2:Hg19::chr2:210444267..210444287,+#_4da689edf826884cebfac223d072c2a6p7@MAP2
4.09e-111FFCP PHASE2:Hg19::chr19:10563567..10563617,+#_c4ac8974493b9e0082c320ca45363637p1@PDE4A
4.09e-111FFCP PHASE1:Hg19::chr19:10563567..10563617,+#_c4ac8974493b9e0082c320ca45363637p1@PDE4A
6.51e-111FFCP PHASE2:Hg19::chr12:99548496..99548518,-#_ebc973f5a3c3cda039dd387b40717be7p3@ANKS1B
6.51e-111FFCP PHASE1:Hg19::chr12:99548496..99548518,-#_ebc973f5a3c3cda039dd387b40717be7p3@ANKS1B
1.23e-110FFCP PHASE2:Hg19::chr11:35441089..35441112,-#_2ea0b6ccbb454cd72203d38db472c0fep1@SLC1A2
1.23e-110FFCP PHASE1:Hg19::chr11:35441089..35441112,-#_2ea0b6ccbb454cd72203d38db472c0fep1@SLC1A2
2.13e-110FFCP PHASE2:Hg19::chr14:58797974..58798011,+#_f8b11a23f60ae1e10f116cb52474e292p3@ARID4A
2.13e-110FFCP PHASE1:Hg19::chr14:58797974..58798011,+#_f8b11a23f60ae1e10f116cb52474e292p3@ARID4A
2.22e-110FFCP PHASE2:Hg19::chr11:62475005..62475041,-#_55bf9179afab99aa0d049cc25372cd76p6@BSCL2
2.22e-110FFCP PHASE1:Hg19::chr11:62475005..62475041,-#_55bf9179afab99aa0d049cc25372cd76p6@BSCL2
2.33e-110FFCP PHASE1:Hg19::chr17:42990725..42990781,-#_3d32680c71c6db59821b0206a2f52436p@chr17:42990725..42990781, -
2.33e-110FFCP PHASE2:Hg19::chr17:42990725..42990781,-#_3d32680c71c6db59821b0206a2f52436p@chr17:42990725..42990781, -
2.49e-110FFCP PHASE2:Hg19::chr16:72459838..72459857,+#_7913cc3abc8af0e27e5713f397b4eccbp1@uc002fch.1
2.49e-110FFCP PHASE1:Hg19::chr16:72459838..72459857,+#_7913cc3abc8af0e27e5713f397b4eccbp1@uc002fch.1
2.95e-110FFCP PHASE2:Hg19::chr4:176733425..176733439,-#_3143a9d8694d57e99c35f6e9ce519f60p8@GPM6A
2.95e-110FFCP PHASE1:Hg19::chr4:176733425..176733439,-#_3143a9d8694d57e99c35f6e9ce519f60p8@GPM6A
3.7e-110FFCP PHASE1:Hg19::chr17:42991115..42991202,-#_8594d42fce2d03aff5675595b098e0a8p@chr17:42991115..42991202, -
3.7e-110FFCP PHASE2:Hg19::chr17:42991115..42991202,-#_8594d42fce2d03aff5675595b098e0a8p@chr17:42991115..42991202, -
3.79e-110FFCP PHASE2:Hg19::chr8:30496078..30496130,+#_f3dc39e6e410746728b81d0f03c996a5p1@LOC100507341
3.79e-110FFCP PHASE1:Hg19::chr8:30496078..30496130,+#_f3dc39e6e410746728b81d0f03c996a5p1@LOC100507341
6.23e-110FFCP PHASE1:Hg19::chr22:50523760..50523787,-#_b44d88a29377d9cdbebada9d75490d2dp4@MLC1
6.23e-110FFCP PHASE2:Hg19::chr22:50523760..50523787,-#_b44d88a29377d9cdbebada9d75490d2dp4@MLC1
6.75e-110FFCP PHASE1:Hg19::chr22:18043185..18043204,+#_c6835e74f9179b49e2b34a00679f58d5p1@SLC25A18
6.75e-110FFCP PHASE2:Hg19::chr22:18043185..18043204,+#_c6835e74f9179b49e2b34a00679f58d5p1@SLC25A18
6.99e-110FFCP PHASE1:Hg19::chr3:181417374..181417407,+#_e3aa26227147764e1110cbdec3fbe372p2@SOX2-OT
6.99e-110FFCP PHASE2:Hg19::chr3:181417374..181417407,+#_e3aa26227147764e1110cbdec3fbe372p2@SOX2-OT
7.56e-110FFCP PHASE1:Hg19::chr16:72459772..72459794,+#_df9b61cbd50b10eaf08aec358dd37de0p2@uc002fch.1
7.56e-110FFCP PHASE2:Hg19::chr16:72459772..72459794,+#_df9b61cbd50b10eaf08aec358dd37de0p2@uc002fch.1
9.95e-110FFCP PHASE1:Hg19::chr1:84630556..84630571,+#_9d8320fdec3aa144e47c6487dc90c1dcp12@PRKACB
9.95e-110FFCP PHASE2:Hg19::chr1:84630556..84630571,+#_9d8320fdec3aa144e47c6487dc90c1dcp12@PRKACB
1.13e-109FFCP PHASE2:Hg19::chr3:42190714..42190787,+#_348debc26ef89f8f8a79f26a5f386f93p3@TRAK1
1.13e-109FFCP PHASE1:Hg19::chr3:42190714..42190787,+#_348debc26ef89f8f8a79f26a5f386f93p3@TRAK1
1.38e-109FFCP PHASE1:Hg19::chr1:160051319..160051366,+#_9c4374caa2719c54eb7c4eea8375f307p1@KCNJ9
1.38e-109FFCP PHASE2:Hg19::chr1:160051319..160051366,+#_9c4374caa2719c54eb7c4eea8375f307p1@KCNJ9
1.97e-109FFCP PHASE1:Hg19::chr4:158141806..158141824,+#_8dee75830d49bef26cb35a7d13765c4ep4@GRIA2
1.97e-109FFCP PHASE2:Hg19::chr4:158141806..158141824,+#_8dee75830d49bef26cb35a7d13765c4ep4@GRIA2
6.44e-109FFCP PHASE2:Hg19::chr12:99548524..99548550,-#_89479cb7fff985f6c3b912aa667dc8f6p2@ANKS1B
6.44e-109FFCP PHASE1:Hg19::chr12:99548524..99548550,-#_89479cb7fff985f6c3b912aa667dc8f6p2@ANKS1B
1.34e-108FFCP PHASE1:Hg19::chr4:176733377..176733424,-#_67017cceb181cb574068e65d7d1701e9p1@GPM6A
1.34e-108FFCP PHASE2:Hg19::chr4:176733377..176733424,-#_67017cceb181cb574068e65d7d1701e9p1@GPM6A
2.1e-108FFCP PHASE1:Hg19::chr12:106976656..106976672,+#_d58fc7fba4623d0cc174bb59107a485dp4@RFX4
2.1e-108FFCP PHASE1:Hg19::chr6:97753454..97753523,+#_d58fc7fba4623d0cc174bb59107a485dp1@uc003ppd.1
2.1e-108FFCP PHASE2:Hg19::chr12:106976656..106976672,+#_d58fc7fba4623d0cc174bb59107a485dp4@RFX4
2.1e-108FFCP PHASE2:Hg19::chr6:97753454..97753523,+#_d58fc7fba4623d0cc174bb59107a485dp1@uc003ppd.1
2.5e-108FFCP PHASE2:Hg19::chr17:76719615..76719624,-#_08e78f29d7963b0d0ee39babba31e9cap9@CYTH1
2.5e-108FFCP PHASE1:Hg19::chr17:76719615..76719624,-#_08e78f29d7963b0d0ee39babba31e9cap9@CYTH1
2.7e-108FFCP PHASE1:Hg19::chr8:27115931..27115942,-#_df47f7493696441b5010e2afe7924fdcp2@STMN4
2.7e-108FFCP PHASE2:Hg19::chr8:27115931..27115942,-#_df47f7493696441b5010e2afe7924fdcp2@STMN4
3.78e-108FFCP PHASE1:Hg19::chr5:87980633..87980649,-#_e137184d598780fc2c91351ed78eebafp5@LINC00461
3.78e-108FFCP PHASE2:Hg19::chr5:87980633..87980649,-#_e137184d598780fc2c91351ed78eebafp5@LINC00461
4.96e-108FFCP PHASE1:Hg19::chr19:19322758..19322773,+#_cf4a35e2ce63653cb98eed61891e7acep1@NCAN
4.96e-108FFCP PHASE2:Hg19::chr19:19322758..19322773,+#_cf4a35e2ce63653cb98eed61891e7acep1@NCAN
6.96e-108FFCP PHASE2:Hg19::chr2:210444345..210444394,+#_375886967f8d9e5ee2ca77639f78779fp3@MAP2
6.96e-108FFCP PHASE1:Hg19::chr2:210444345..210444394,+#_375886967f8d9e5ee2ca77639f78779fp3@MAP2
9.52e-108FFCP PHASE1:Hg19::chr16:72459805..72459824,+#_b770881ba65cd7ad11a5498a8c95848fp4@uc002fch.1
9.52e-108FFCP PHASE2:Hg19::chr16:72459805..72459824,+#_b770881ba65cd7ad11a5498a8c95848fp4@uc002fch.1
3.21e-107FFCP PHASE2:Hg19::chr3:47932759..47932803,-#_4a354701a7a1bf0ac26a5dfc29cbfe49p12@MAP4
3.21e-107FFCP PHASE1:Hg19::chr3:47932759..47932803,-#_4a354701a7a1bf0ac26a5dfc29cbfe49p12@MAP4
3.87e-107FFCP PHASE2:Hg19::chr5:87437585..87437647,+#_1b2b62d0a3c825b8540b21213ddda1aap@chr5:87437585..87437647, +
3.87e-107FFCP PHASE1:Hg19::chr5:87437585..87437647,+#_1b2b62d0a3c825b8540b21213ddda1aap@chr5:87437585..87437647, +
4.4e-107FFCP PHASE2:Hg19::chr2:210444402..210444423,+#_5d26e619834a7ec1863019f6d0627f99p11@MAP2
4.4e-107FFCP PHASE1:Hg19::chr2:210444402..210444423,+#_5d26e619834a7ec1863019f6d0627f99p11@MAP2
4.86e-107FFCP PHASE2:Hg19::chr11:35440579..35440595,-#_349e83e6c91d1fa833d36212fda13c7ap7@SLC1A2
4.86e-107FFCP PHASE1:Hg19::chr11:35440579..35440595,-#_349e83e6c91d1fa833d36212fda13c7ap7@SLC1A2

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