Personal tools

UBERON:0002390

From FANTOM5_SSTAR

Revision as of 11:09, 24 February 2012 by Autoedit (talk | contribs) (Created page with "{{UBERON |id=UBERON:0002390 |name=hematopoietic system |namespace= |def="The tissues concerned in production of the blood, including the bone marrow, liver, lymph nodes, s...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Name:hematopoietic system
Definition:"The tissues concerned in production of the blood, including the bone marrow, liver, lymph nodes, spleen, and thymus[BTO]. Anatomical system that consists of the blood and blood forming tissues. The bodily system of organs and tissues, primarily the bone marrow, spleen, tonsils, and lymph nodes, involved in the production of blood[FD]." [BTO:0000570, http://www.thefreedictionary.com/hematopoietic+system, OMD:haematological, Wikipedia:Hematopoietic_system]
Xrefs:
links:

AAO:0011002
BTO:0000570
EFO:0000798
EV:0100045
FMA:9667
GAID:1008
MA:0002434
MAT:0000022
MESH:A.15.378
MIAA:0000022
ncithesaurus:Hematopoietic_System
SCTID:362587009
TAO:0005023
VHOG:0001624
XAO:0000122

ZFA:0005023
Synonyms: "Blutbildungssystem" RELATED [BTO:0000570]
"haematological system" EXACT []
"haematopoietic system" RELATED []
"haemopoietic system" EXACT []
"hematological system" RELATED []
"hematolymphoid system" RELATED []
"hemopoietic system" RELATED []
"organa haemopoietica" EXACT []
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FMA_9667-MA_0002434-MIAA_0000022-XAO_0000122-ZFA_0005023
Subset: uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000467(anatomical system),UBERON:0004120(mesoderm-derived structure)
disjoint_from:UBERON:0002405(immune system),UBERON:0002416(integumental system),UBERON:0002423(hepatobiliary system),UBERON:0004456(entire sense organ system)
develops_from:UBERON:0003061(blood island)
part_of:UBERON:0002193(hemolymphoid system)



Children

disjoint from:UBERON:0000949 (endocrine system),UBERON:0000990 (reproductive system),UBERON:0001004 (respiratory system),UBERON:0001007 (digestive system),UBERON:0001008 (renal system),UBERON:0001009 (circulatory system),UBERON:0001016 (nervous system),UBERON:0001033 (gustatory system),UBERON:0001434 (skeletal system),UBERON:0002204 (musculoskeletal system),UBERON:0002294 (biliary system),UBERON:0002330 (exocrine system)
part of:UBERON:0000178 (blood),UBERON:0002106 (spleen),UBERON:0002370 (thymus),UBERON:0002371 (bone marrow),UBERON:0004177 (hemopoietic organ),UBERON:0012429 (hemopoietic tissue)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002390 (hematopoietic system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.58e-110FFCP PHASE1:Hg19::chr6:134694635..134694653,-#_f342b01d4cb7eb20c60612a97d616989p@chr6:134694635..134694653, -
2.58e-110FFCP PHASE2:Hg19::chr6:134694635..134694653,-#_f342b01d4cb7eb20c60612a97d616989p@chr6:134694635..134694653, -
2.89e-110FFCP PHASE2:Hg19::chr16:50313426..50313459,+#_55ed8908e3dc1a1892338ef0bd41ff16p@chr16:50313426..50313459, +
2.89e-110FFCP PHASE1:Hg19::chr16:50313426..50313459,+#_55ed8908e3dc1a1892338ef0bd41ff16p@chr16:50313426..50313459, +
4.8e-108FFCP PHASE1:Hg19::chr19:54784461..54784484,-#_35b564ba644c7fdea769bc21d6846971p2@LILRB2
4.8e-108FFCP PHASE2:Hg19::chr19:54784461..54784484,-#_35b564ba644c7fdea769bc21d6846971p2@LILRB2
3.93e-106FFCP PHASE1:Hg19::chr1:1711415..1711426,-#_3e39e2836c1a38c0c679eedda53ce1ffp4@NADK
3.93e-106FFCP PHASE2:Hg19::chr1:1711415..1711426,-#_3e39e2836c1a38c0c679eedda53ce1ffp4@NADK
2.07e-105FFCP PHASE1:Hg19::chr1:150724282..150724308,-#_f40ec9a76324549b1ff71989a7d412d7p8@CTSS
2.07e-105FFCP PHASE2:Hg19::chr1:150724282..150724308,-#_f40ec9a76324549b1ff71989a7d412d7p8@CTSS
2.38e-105FFCP PHASE2:Hg19::chr2:119726719..119726744,+#_01dbba8ade8eb3cdc5fe82e30a532851p@chr2:119726719..119726744, +
2.38e-105FFCP PHASE1:Hg19::chr2:119726719..119726744,+#_01dbba8ade8eb3cdc5fe82e30a532851p@chr2:119726719..119726744, +
4.18e-105FFCP PHASE2:Hg19::chr5:156534291..156534357,-#_13fc50d430045dd0f4d8e53bc9299136p4@HAVCR2
4.18e-105FFCP PHASE1:Hg19::chr5:156534291..156534357,-#_13fc50d430045dd0f4d8e53bc9299136p4@HAVCR2
3.0e-104FFCP PHASE1:Hg19::chr7:99971180..99971191,+#_42029068e9bca58d9a60b3be27ebe383p3@PILRA
3.0e-104FFCP PHASE2:Hg19::chr7:99971180..99971191,+#_42029068e9bca58d9a60b3be27ebe383p3@PILRA
7.83e-104FFCP PHASE2:Hg19::chr10:20105868..20105875,+#_d5647355c03a4e89a426b1f9538df4f3p8@PLXDC2
7.83e-104FFCP PHASE1:Hg19::chr10:20105868..20105875,+#_d5647355c03a4e89a426b1f9538df4f3p8@PLXDC2
1.97e-102FFCP PHASE2:Hg19::chr10:97457378..97457404,+#_b1d37617b143f521aa541a7d745d7822p@chr10:97457378..97457404, +
1.97e-102FFCP PHASE1:Hg19::chr10:97457378..97457404,+#_b1d37617b143f521aa541a7d745d7822p@chr10:97457378..97457404, +
4.0e-102FFCP PHASE1:Hg19::chr2:38358217..38358244,+#_4357b78726a05da8cfeb03fbed0c127fp1@CYP1B1-AS1
4.0e-102FFCP PHASE2:Hg19::chr2:38358217..38358244,+#_4357b78726a05da8cfeb03fbed0c127fp1@CYP1B1-AS1
6.74e-102FFCP PHASE1:Hg19::chr1:150705526..150705571,-#_5acec3067e80654e61e2dc873d16f882p@chr1:150705526..150705571, -
6.74e-102FFCP PHASE2:Hg19::chr1:150705526..150705571,-#_5acec3067e80654e61e2dc873d16f882p@chr1:150705526..150705571, -
3.93e-101FFCP PHASE1:Hg19::chr18:2847062..2847071,+#_20367bbc000300b362cd98264db79980p7@EMILIN2
3.93e-101FFCP PHASE2:Hg19::chr18:2847062..2847071,+#_20367bbc000300b362cd98264db79980p7@EMILIN2
1.89e-100FFCP PHASE2:Hg19::chr16:8738211..8738249,+#_41f967efe566a90d5516e66a1ec72196p@chr16:8738211..8738249, +
1.89e-100FFCP PHASE1:Hg19::chr16:8738211..8738249,+#_41f967efe566a90d5516e66a1ec72196p@chr16:8738211..8738249, +
3.51e-100FFCP PHASE1:Hg19::chr14:103587759..103587770,+#_656adc25d88e4392cb783839e5914b3ap@chr14:103587759..103587770, +
3.51e-100FFCP PHASE2:Hg19::chr14:103587759..103587770,+#_656adc25d88e4392cb783839e5914b3ap@chr14:103587759..103587770, +
4.01e-100FFCP PHASE1:Hg19::chr19:18283959..18283993,+#_1d17d1ff57920a9c460b5df388b0f5d7p@chr19:18283959..18283993, +
4.01e-100FFCP PHASE2:Hg19::chr19:18283959..18283993,+#_1d17d1ff57920a9c460b5df388b0f5d7p@chr19:18283959..18283993, +
4.94e-100FFCP PHASE1:Hg19::chr5:176326310..176326321,-#_011295c89591606b11a6ba0864db3be7p2@HK3
4.94e-100FFCP PHASE2:Hg19::chr5:176326310..176326321,-#_011295c89591606b11a6ba0864db3be7p2@HK3
5.73e-100FFCP PHASE1:Hg19::chr19:54726874..54726887,-#_e16ae2d5a590bb8b2e5c161d5de342e1p1@LILRB3
5.73e-100FFCP PHASE2:Hg19::chr19:54726874..54726887,-#_e16ae2d5a590bb8b2e5c161d5de342e1p1@LILRB3
8.49e-100FFCP PHASE2:Hg19::chr7:139586209..139586213,+#_19d8b9d594f315db52b5c6e6b5d417cdp@chr7:139586209..139586213, +
8.49e-100FFCP PHASE1:Hg19::chr7:139586209..139586213,+#_19d8b9d594f315db52b5c6e6b5d417cdp@chr7:139586209..139586213, +
3.73e-99FFCP PHASE2:Hg19::chr19:47823947..47823977,+#_f67823b743f1813bdf3599bc01671ef3p@chr19:47823947..47823977, +
3.73e-99FFCP PHASE1:Hg19::chr19:47823947..47823977,+#_f67823b743f1813bdf3599bc01671ef3p@chr19:47823947..47823977, +
5.25e-99FFCP PHASE2:Hg19::chr7:139529081..139529084,+#_f92fa878d6f4e2b969210ae8859b35ebp6@TBXAS1
5.25e-99FFCP PHASE1:Hg19::chr7:139529081..139529084,+#_f92fa878d6f4e2b969210ae8859b35ebp6@TBXAS1
1.2e-98FFCP PHASE2:Hg19::chr17:72542163..72542182,-#_3108392afbb07c7b3aaf65ddd574336ep2@CD300C
1.2e-98FFCP PHASE1:Hg19::chr17:72542163..72542182,-#_3108392afbb07c7b3aaf65ddd574336ep2@CD300C
1.58e-98FFCP PHASE1:Hg19::chr6:31555045..31555057,+#_e15571c3312d8e4a40ea043577fda2c3p9@LST1
1.58e-98FFCP PHASE2:Hg19::chr6:31555045..31555057,+#_e15571c3312d8e4a40ea043577fda2c3p9@LST1
2.87e-98FFCP PHASE2:Hg19::chr19:54823886..54823925,-#_95f6ac3c112978d41be8de0f9bdb802cp2@LILRA5
2.87e-98FFCP PHASE1:Hg19::chr19:54823886..54823925,-#_95f6ac3c112978d41be8de0f9bdb802cp2@LILRA5
3.15e-98FFCP PHASE1:Hg19::chr19:18287936..18287989,+#_efde6dbe1ecec2863ca49ae4482a0a33p@chr19:18287936..18287989, +
3.15e-98FFCP PHASE2:Hg19::chr19:18287936..18287989,+#_efde6dbe1ecec2863ca49ae4482a0a33p@chr19:18287936..18287989, +
3.31e-98FFCP PHASE1:Hg19::chr1:161188686..161188721,+#_31b2d264c04791ca10f8eaaa5c58a1b9p@chr1:161188686..161188721, +
3.31e-98FFCP PHASE2:Hg19::chr1:161188686..161188721,+#_31b2d264c04791ca10f8eaaa5c58a1b9p@chr1:161188686..161188721, +
4.2e-98FFCP PHASE1:Hg19::chr9:137808181..137808200,+#_42136d98de58551a89fab9dc207e7b5cp@chr9:137808181..137808200, +
4.2e-98FFCP PHASE2:Hg19::chr9:137808181..137808200,+#_42136d98de58551a89fab9dc207e7b5cp@chr9:137808181..137808200, +
9.37e-98FFCP PHASE2:Hg19::chr14:92927376..92927396,+#_c54165091c9f734466efe7fe554ff218p@chr14:92927376..92927396, +
9.37e-98FFCP PHASE1:Hg19::chr14:92927376..92927396,+#_c54165091c9f734466efe7fe554ff218p@chr14:92927376..92927396, +
1.89e-97FFCP PHASE2:Hg19::chr12:54778351..54778378,-#_d59410755bd32150a72bf255c04cc8abp6@ZNF385A
1.89e-97FFCP PHASE1:Hg19::chr12:54778351..54778378,-#_d59410755bd32150a72bf255c04cc8abp6@ZNF385A
2.05e-97FFCP PHASE2:Hg19::chrX:152086449..152086473,+#_c4962561258939fc88f6bb0a0add9fabp4@ZNF185
2.05e-97FFCP PHASE1:Hg19::chrX:152086449..152086473,+#_c4962561258939fc88f6bb0a0add9fabp4@ZNF185
1.42e-96FFCP PHASE2:Hg19::chr12:8276224..8276237,+#_0a24ee29dbe29c47e39ba5e47f9c67e2p3@CLEC4A
1.42e-96FFCP PHASE1:Hg19::chr12:8276224..8276237,+#_0a24ee29dbe29c47e39ba5e47f9c67e2p3@CLEC4A
2.06e-96FFCP PHASE2:Hg19::chr11:58977674..58977688,-#_aa0f337fbf76c3d4db3ae2faa17a5b71p1@AK024358
2.06e-96FFCP PHASE1:Hg19::chr11:58977674..58977688,-#_aa0f337fbf76c3d4db3ae2faa17a5b71p1@AK024358
2.51e-96FFCP PHASE2:Hg19::chr2:145429606..145429658,+#_7c5bfb08b8208ce09ff6ec4c7376c621p@chr2:145429606..145429658, +
2.51e-96FFCP PHASE1:Hg19::chr2:145429606..145429658,+#_7c5bfb08b8208ce09ff6ec4c7376c621p@chr2:145429606..145429658, +
2.72e-96FFCP PHASE2:Hg19::chr5:79442172..79442212,-#_40f809655bf998034fe2998de4494ca8p@chr5:79442172..79442212, -
2.72e-96FFCP PHASE1:Hg19::chr5:79442172..79442212,-#_40f809655bf998034fe2998de4494ca8p@chr5:79442172..79442212, -
4.76e-96FFCP PHASE1:Hg19::chr14:103587774..103587784,+#_a6e458289f0e9258a59a81020fa64658p@chr14:103587774..103587784, +
4.76e-96FFCP PHASE2:Hg19::chr14:103587774..103587784,+#_a6e458289f0e9258a59a81020fa64658p@chr14:103587774..103587784, +
6.11e-96FFCP PHASE1:Hg19::chr1:161039459..161039478,-#_c932ad0e15297f89d46917bc48ccd4d4p4@ARHGAP30
6.11e-96FFCP PHASE2:Hg19::chr1:161039459..161039478,-#_c932ad0e15297f89d46917bc48ccd4d4p4@ARHGAP30
6.16e-96FFCP PHASE1:Hg19::chr11:47380465..47380487,-#_97ac72a6384110743d936bcaf5239c41p@chr11:47380465..47380487, -
6.16e-96FFCP PHASE2:Hg19::chr11:47380465..47380487,-#_97ac72a6384110743d936bcaf5239c41p@chr11:47380465..47380487, -
6.29e-96FFCP PHASE1:Hg19::chr11:122735321..122735348,+#_cef91425c5137479601fefb34f74f7e8p1@CRTAM
6.29e-96FFCP PHASE2:Hg19::chr11:122735321..122735348,+#_cef91425c5137479601fefb34f74f7e8p1@CRTAM
6.59e-96FFCP PHASE2:Hg19::chrX:80458085..80458112,+#_70212151d2515ad45c3c8f38cc747cdap7@SH3BGRL
6.59e-96FFCP PHASE1:Hg19::chrX:80458085..80458112,+#_70212151d2515ad45c3c8f38cc747cdap7@SH3BGRL
7.11e-96FFCP PHASE1:Hg19::chr14:92927429..92927462,+#_7a398644455873c0f817629de8f00908p@chr14:92927429..92927462, +
7.11e-96FFCP PHASE2:Hg19::chr14:92927429..92927462,+#_7a398644455873c0f817629de8f00908p@chr14:92927429..92927462, +
7.98e-96FFCP PHASE2:Hg19::chr14:92927400..92927421,+#_00e000a9f8abe889314eaa4ab2b9c191p@chr14:92927400..92927421, +
7.98e-96FFCP PHASE1:Hg19::chr14:92927400..92927421,+#_00e000a9f8abe889314eaa4ab2b9c191p@chr14:92927400..92927421, +
8.84e-96FFCP PHASE1:Hg19::chr21:30672433..30672464,+#_2bc7b603141ea35dfe379deedff711f7p6@BACH1
8.84e-96FFCP PHASE2:Hg19::chr21:30672433..30672464,+#_2bc7b603141ea35dfe379deedff711f7p6@BACH1
1.08e-95FFCP PHASE2:Hg19::chr19:36395505..36395529,-#_611225d3664130b3a08adbf54c7be626p@chr19:36395505..36395529, -
1.08e-95FFCP PHASE1:Hg19::chr19:36395505..36395529,-#_611225d3664130b3a08adbf54c7be626p@chr19:36395505..36395529, -
1.29e-95FFCP PHASE1:Hg19::chr7:99987647..99987671,+#_1a0dd85b0469d50341dda9cc175801bcp@chr7:99987647..99987671, +
1.29e-95FFCP PHASE2:Hg19::chr7:99987647..99987671,+#_1a0dd85b0469d50341dda9cc175801bcp@chr7:99987647..99987671, +
1.5e-95FFCP PHASE1:Hg19::chr1:27961720..27961727,-#_a9c3d51d5ac2ea3a088b5098e1083a46p10@FGR
1.5e-95FFCP PHASE2:Hg19::chr1:27961720..27961727,-#_a9c3d51d5ac2ea3a088b5098e1083a46p10@FGR
2.71e-95FFCP PHASE2:Hg19::chr1:183556062..183556079,-#_05d8f1b9c96e904d4f84e3d3f9b0038ap@chr1:183556062..183556079, -
2.71e-95FFCP PHASE1:Hg19::chr1:183556062..183556079,-#_05d8f1b9c96e904d4f84e3d3f9b0038ap@chr1:183556062..183556079, -
3.52e-95FFCP PHASE2:Hg19::chr14:95651949..95651981,+#_93345f4772350bd071717c905bf4d7f1p@chr14:95651949..95651981, +
3.52e-95FFCP PHASE1:Hg19::chr14:95651949..95651981,+#_93345f4772350bd071717c905bf4d7f1p@chr14:95651949..95651981, +
4.01e-95FFCP PHASE2:Hg19::chr2:109204876..109204889,+#_688f75225c98cc0a1c4ab61be6d9a294p7@LIMS1
4.01e-95FFCP PHASE1:Hg19::chr2:109204876..109204889,+#_688f75225c98cc0a1c4ab61be6d9a294p7@LIMS1
4.48e-95FFCP PHASE2:Hg19::chr12:10279509..10279514,-#_da7798d23046f992aa6c713c6143f5d9p4@CLEC7A
4.48e-95FFCP PHASE1:Hg19::chr12:10279509..10279514,-#_da7798d23046f992aa6c713c6143f5d9p4@CLEC7A
6.92e-95FFCP PHASE1:Hg19::chr5:156534012..156534066,-#_825136fc96aaa15dbdcf9a91030249a4p10@HAVCR2
6.92e-95FFCP PHASE2:Hg19::chr5:156534012..156534066,-#_825136fc96aaa15dbdcf9a91030249a4p10@HAVCR2

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0002390&oldid=414894"