FFCP PHASE1:Hg19::chr10:129863525..129863536,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2|description=CAGE_peak_at_chr10:129863525..129863536,+|id=chr10:129863525..129863536,+|ontology_enrichment_celltype=CL:0000766!4.48e-71!76;CL:0002057!8.21e-69!42;CL:0000860!9.88e-64!45;CL:0002009!2.01e-54!65;CL:0000763!3.63e-53!112;CL:0000049!3.63e-53!112;CL:0002194!7.46e-53!63;CL:0000576!7.46e-53!63;CL:0000040!7.46e-53!63;CL:0000559!7.46e-53!63;CL:0000557!3.31e-49!71;CL:0000738!9.54e-48!140;CL:0000839!7.45e-47!70;CL:0000037!7.16e-41!172;CL:0000566!7.16e-41!172;CL:0000988!4.46e-38!182;CL:0002032!8.69e-37!165;CL:0000837!8.69e-37!165;CL:0002087!2.17e-34!119;CL:0002393!4.58e-33!9;CL:0002397!4.58e-33!9;CL:0000094!9.23e-32!8;CL:0002031!1.64e-28!124;CL:0000081!1.05e-22!11;CL:0000134!2.78e-15!358;CL:0002320!8.66e-15!365;CL:0000775!3.12e-13!3;CL:0000219!4.78e-13!390;CL:0000767!1.50e-12!3;CL:0000842!3.63e-12!3;CL:0000875!2.53e-11!3;CL:0002396!2.53e-11!3;CL:0000048!5.82e-11!430;CL:0000723!1.15e-10!436;CL:0000034!2.78e-10!444;CL:0000771!1.78e-09!2;CL:0000224!3.12e-09!4|ontology_enrichment_celltype_v019=CL:0000094;4.25e-53;8!CL:0002393;1.81e-48;6!CL:0002397;1.81e-48;6!CL:0000081;1.39e-38;11!CL:0000775;2.08e-36;3!CL:0000771;3.44e-25;2!CL:0000766;8.01e-19;69!CL:0000576;2.28e-10;48!CL:0000763;1.33e-08;100|ontology_enrichment_celltype_v019_2=CL:0000094,4.45e-53,8;CL:0000081,1.43e-38,11;CL:0000775,1.85e-36,3;CL:0000766,2.86e-34,72;CL:0002393,2.37e-32,9;CL:0002397,2.37e-32,9;CL:0000771,3.44e-25,2;CL:0000763,2.31e-22,108;CL:0000049,2.31e-22,108;CL:0000738,5.37e-20,136;CL:0000473,1.37e-18,48;CL:0000234,1.37e-18,48;CL:0000860,6.04e-17,42;CL:0002057,6.04e-17,42;CL:0000037,7.66e-16,168;CL:0000988,6.10e-15,177;CL:0002194,1.15e-14,59;CL:0000576,1.15e-14,59;CL:0000040,1.15e-14,59;CL:0000559,1.15e-14,59;CL:0002032,1.98e-14,161;CL:0000837,1.98e-14,161;CL:0002009,3.68e-14,61;CL:0000839,5.02e-13,66;CL:0000557,8.08e-13,67;CL:0002087,9.16e-09,115|ontology_enrichment_development_v019=CL:0002057;2.48e-13;42!CL:0000049;6.80e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!7.32e-47!102;UBERON:0003061!7.32e-47!102;UBERON:0002371!7.87e-43!80;UBERON:0002193!6.70e-42!112;UBERON:0001474!2.59e-39!86;UBERON:0004765!2.47e-32!101;UBERON:0001434!2.47e-32!101;UBERON:0002405!1.88e-27!115;UBERON:0003081!1.97e-17!216;UBERON:0002204!1.76e-16!167;UBERON:0002384!4.09e-14!375;UBERON:0000178!1.62e-08!15;UBERON:0000179!1.62e-08!15;UBERON:0000463!1.62e-08!15|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.47e-13,98;UBERON:0003061,9.47e-13,98;UBERON:0002193,1.90e-11,108;UBERON:0002371,3.39e-11,76;UBERON:0001474,2.62e-10,82;UBERON:0004765,2.63e-09,90;UBERON:0002405,5.65e-09,93;UBERON:0001434,2.82e-08,100|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.767658796194425,0.928896739896456,0,0,0,0,0,0,3.32397245119126,2.4065333696417,3.47217393145363,0,0,0,0,0,0,0.464858073811369,0.411167888021826,0.309706370895104,0,0.256160706529101,0.47296445977717,1.37898272294647,0,0,0.376484679085209,0.272906150057846,0.224723484445085,0.612167784741805,0,0.639337125799041,0,0,0,0.290209238628584,0,0.622822248995575,0,0,0.65156653411535,0.605399502633369,0.736555271975129,0.632924774881769,1.05627643155971,0.212604299965044,1.46761051855863,2.3589012540764,0.600707571366025,1.76798145366788,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.038279312852,31.022421131866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,3.74503511973591,5.9832291840805,12.4324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.2942852049117,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr10:129863525..129863536,+ | |||
|id=chr10:129863525..129863536,+ | |||
|ontology_enrichment_celltype=CL:0000766!4.48e-71!76;CL:0002057!8.21e-69!42;CL:0000860!9.88e-64!45;CL:0002009!2.01e-54!65;CL:0000763!3.63e-53!112;CL:0000049!3.63e-53!112;CL:0002194!7.46e-53!63;CL:0000576!7.46e-53!63;CL:0000040!7.46e-53!63;CL:0000559!7.46e-53!63;CL:0000557!3.31e-49!71;CL:0000738!9.54e-48!140;CL:0000839!7.45e-47!70;CL:0000037!7.16e-41!172;CL:0000566!7.16e-41!172;CL:0000988!4.46e-38!182;CL:0002032!8.69e-37!165;CL:0000837!8.69e-37!165;CL:0002087!2.17e-34!119;CL:0002393!4.58e-33!9;CL:0002397!4.58e-33!9;CL:0000094!9.23e-32!8;CL:0002031!1.64e-28!124;CL:0000081!1.05e-22!11;CL:0000134!2.78e-15!358;CL:0002320!8.66e-15!365;CL:0000775!3.12e-13!3;CL:0000219!4.78e-13!390;CL:0000767!1.50e-12!3;CL:0000842!3.63e-12!3;CL:0000875!2.53e-11!3;CL:0002396!2.53e-11!3;CL:0000048!5.82e-11!430;CL:0000723!1.15e-10!436;CL:0000034!2.78e-10!444;CL:0000771!1.78e-09!2;CL:0000224!3.12e-09!4 | |||
|ontology_enrichment_celltype_v019=CL:0000094;4.25e-53;8!CL:0002393;1.81e-48;6!CL:0002397;1.81e-48;6!CL:0000081;1.39e-38;11!CL:0000775;2.08e-36;3!CL:0000771;3.44e-25;2!CL:0000766;8.01e-19;69!CL:0000576;2.28e-10;48!CL:0000763;1.33e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,4.45e-53,8;CL:0000081,1.43e-38,11;CL:0000775,1.85e-36,3;CL:0000766,2.86e-34,72;CL:0002393,2.37e-32,9;CL:0002397,2.37e-32,9;CL:0000771,3.44e-25,2;CL:0000763,2.31e-22,108;CL:0000049,2.31e-22,108;CL:0000738,5.37e-20,136;CL:0000473,1.37e-18,48;CL:0000234,1.37e-18,48;CL:0000860,6.04e-17,42;CL:0002057,6.04e-17,42;CL:0000037,7.66e-16,168;CL:0000988,6.10e-15,177;CL:0002194,1.15e-14,59;CL:0000576,1.15e-14,59;CL:0000040,1.15e-14,59;CL:0000559,1.15e-14,59;CL:0002032,1.98e-14,161;CL:0000837,1.98e-14,161;CL:0002009,3.68e-14,61;CL:0000839,5.02e-13,66;CL:0000557,8.08e-13,67;CL:0002087,9.16e-09,115 | |||
|ontology_enrichment_development_v019=CL:0002057;2.48e-13;42!CL:0000049;6.80e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.32e-47!102;UBERON:0003061!7.32e-47!102;UBERON:0002371!7.87e-43!80;UBERON:0002193!6.70e-42!112;UBERON:0001474!2.59e-39!86;UBERON:0004765!2.47e-32!101;UBERON:0001434!2.47e-32!101;UBERON:0002405!1.88e-27!115;UBERON:0003081!1.97e-17!216;UBERON:0002204!1.76e-16!167;UBERON:0002384!4.09e-14!375;UBERON:0000178!1.62e-08!15;UBERON:0000179!1.62e-08!15;UBERON:0000463!1.62e-08!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.47e-13,98;UBERON:0003061,9.47e-13,98;UBERON:0002193,1.90e-11,108;UBERON:0002371,3.39e-11,76;UBERON:0001474,2.62e-10,82;UBERON:0004765,2.63e-09,90;UBERON:0002405,5.65e-09,93;UBERON:0001434,2.82e-08,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.767658796194425,0.928896739896456,0,0,0,0,0,0,3.32397245119126,2.4065333696417,3.47217393145363,0,0,0,0,0,0,0.464858073811369,0.411167888021826,0.309706370895104,0,0.256160706529101,0.47296445977717,1.37898272294647,0,0,0.376484679085209,0.272906150057846,0.224723484445085,0.612167784741805,0,0.639337125799041,0,0,0,0.290209238628584,0,0.622822248995575,0,0,0.65156653411535,0.605399502633369,0.736555271975129,0.632924774881769,1.05627643155971,0.212604299965044,1.46761051855863,2.3589012540764,0.600707571366025,1.76798145366788,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.038279312852,31.022421131866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,3.74503511973591,5.9832291840805,12.4324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.2942852049117,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:129863525..129863536,+ | |||
}} |
Revision as of 12:21, 10 September 2013
Short description: | p@chr10:129863525..129863536, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:129863525..129863536, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 4.45e-53 | 8 |
blood cell | 1.43e-38 | 11 |
neutrophil | 1.85e-36 | 3 |
myeloid leukocyte | 2.86e-34 | 72 |
intermediate monocyte | 2.37e-32 | 9 |
CD14-positive, CD16-positive monocyte | 2.37e-32 | 9 |
eosinophil | 3.44e-25 | 2 |
myeloid cell | 2.31e-22 | 108 |
common myeloid progenitor | 2.31e-22 | 108 |
leukocyte | 5.37e-20 | 136 |
defensive cell | 1.37e-18 | 48 |
phagocyte | 1.37e-18 | 48 |
classical monocyte | 6.04e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.04e-17 | 42 |
hematopoietic stem cell | 7.66e-16 | 168 |
hematopoietic cell | 6.10e-15 | 177 |
monopoietic cell | 1.15e-14 | 59 |
monocyte | 1.15e-14 | 59 |
monoblast | 1.15e-14 | 59 |
promonocyte | 1.15e-14 | 59 |
hematopoietic oligopotent progenitor cell | 1.98e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.98e-14 | 161 |
macrophage dendritic cell progenitor | 3.68e-14 | 61 |
myeloid lineage restricted progenitor cell | 5.02e-13 | 66 |
granulocyte monocyte progenitor cell | 8.08e-13 | 67 |
nongranular leukocyte | 9.16e-09 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.47e-13 | 98 |
blood island | 9.47e-13 | 98 |
hemolymphoid system | 1.90e-11 | 108 |
bone marrow | 3.39e-11 | 76 |
bone element | 2.62e-10 | 82 |
skeletal element | 2.63e-09 | 90 |
immune system | 5.65e-09 | 93 |
skeletal system | 2.82e-08 | 100 |
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