FFCP PHASE1:Hg19::chr10:30831903..30831917,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:30831903..30831917,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr10:30831903..30831917,+ | |description=CAGE_peak_at_chr10:30831903..30831917,+ | ||
|id=chr10:30831903..30831917,+ | |id=chr10:30831903..30831917,+ | ||
|ontology_enrichment_celltype=CL:0000860;1.38e-63;33!CL:0002057;1.38e-63;33!CL:0000473;1.48e-45;39!CL:0000234;1.48e-45;39!CL:0000576;1.23e-25;48!CL:0000766;1.18e-19;69!CL:0002087;8.15e-14;104!CL:0000763;9.22e-13;100 | |ontology_enrichment_celltype=CL:0002057!1.00e-88!42;CL:0000860!1.37e-82!45;CL:0002194!1.55e-62!63;CL:0000576!1.55e-62!63;CL:0000040!1.55e-62!63;CL:0000559!1.55e-62!63;CL:0002009!1.55e-60!65;CL:0000839!4.95e-56!70;CL:0000557!3.32e-55!71;CL:0000766!2.14e-51!76;CL:0002087!9.79e-35!119;CL:0000763!6.72e-34!112;CL:0000049!6.72e-34!112;CL:0002031!2.67e-30!124;CL:0000738!5.06e-29!140;CL:0000037!5.67e-23!172;CL:0000566!5.67e-23!172;CL:0002032!6.47e-22!165;CL:0000837!6.47e-22!165;CL:0000988!1.63e-21!182;CL:0000134!3.69e-10!358;CL:0002320!6.89e-10!365;CL:0000219!6.23e-09!390;CL:0000048!8.75e-08!430;CL:0000723!1.27e-07!436;CL:0000034!2.07e-07!444 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;1.38e-63;33!CL:0002057;1.38e-63;33!CL:0000473;1.48e-45;39!CL:0000234;1.48e-45;39!CL:0000576;1.23e-25;48!CL:0000766;1.18e-19;69!CL:0002087;8.15e-14;104!CL:0000763;9.22e-13;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.62e-55,42;CL:0002057,1.62e-55,42;CL:0000473,1.66e-48,48;CL:0000234,1.66e-48,48;CL:0002194,1.10e-38,59;CL:0000576,1.10e-38,59;CL:0000040,1.10e-38,59;CL:0000559,1.10e-38,59;CL:0002009,2.04e-37,61;CL:0000839,1.41e-34,66;CL:0000557,4.65e-34,67;CL:0000766,1.11e-31,72;CL:0000763,5.64e-21,108;CL:0000049,5.64e-21,108;CL:0002087,1.16e-19,115;CL:0002031,8.13e-19,120;CL:0000738,1.60e-16,136;CL:0002032,7.73e-14,161;CL:0000837,7.73e-14,161;CL:0000037,3.15e-13,168;CL:0000988,1.64e-12,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.34e-36;42!CL:0000049;1.35e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.10e-48!80;UBERON:0001474!4.36e-45!86;UBERON:0002390!4.64e-41!102;UBERON:0003061!4.64e-41!102;UBERON:0004765!6.14e-38!101;UBERON:0001434!6.14e-38!101;UBERON:0002193!4.13e-37!112;UBERON:0002405!6.26e-33!115;UBERON:0002204!1.30e-21!167;UBERON:0003081!1.49e-17!216;UBERON:0002384!1.61e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.34e-30,76;UBERON:0001474,8.85e-28,82;UBERON:0004765,2.83e-25,90;UBERON:0002405,1.92e-24,93;UBERON:0002390,3.59e-23,98;UBERON:0003061,3.59e-23,98;UBERON:0001434,1.07e-22,100;UBERON:0002193,5.64e-21,108;UBERON:0002204,2.60e-13,167;UBERON:0003081,8.49e-11,203 | |||
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|short_description=p@chr10:30831903..30831917,+ | |short_description=p@chr10:30831903..30831917,+ | ||
}} | }} |
Latest revision as of 13:08, 23 July 2015
Short description: | p@chr10:30831903..30831917, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:30831903..30831917, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.62e-55 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.62e-55 | 42 |
defensive cell | 1.66e-48 | 48 |
phagocyte | 1.66e-48 | 48 |
monopoietic cell | 1.10e-38 | 59 |
monocyte | 1.10e-38 | 59 |
monoblast | 1.10e-38 | 59 |
promonocyte | 1.10e-38 | 59 |
macrophage dendritic cell progenitor | 2.04e-37 | 61 |
myeloid lineage restricted progenitor cell | 1.41e-34 | 66 |
granulocyte monocyte progenitor cell | 4.65e-34 | 67 |
myeloid leukocyte | 1.11e-31 | 72 |
myeloid cell | 5.64e-21 | 108 |
common myeloid progenitor | 5.64e-21 | 108 |
nongranular leukocyte | 1.16e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 8.13e-19 | 120 |
leukocyte | 1.60e-16 | 136 |
hematopoietic oligopotent progenitor cell | 7.73e-14 | 161 |
hematopoietic multipotent progenitor cell | 7.73e-14 | 161 |
hematopoietic stem cell | 3.15e-13 | 168 |
hematopoietic cell | 1.64e-12 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.34e-30 | 76 |
bone element | 8.85e-28 | 82 |
skeletal element | 2.83e-25 | 90 |
immune system | 1.92e-24 | 93 |
hematopoietic system | 3.59e-23 | 98 |
blood island | 3.59e-23 | 98 |
skeletal system | 1.07e-22 | 100 |
hemolymphoid system | 5.64e-21 | 108 |
musculoskeletal system | 2.60e-13 | 167 |
lateral plate mesoderm | 8.49e-11 | 203 |