FFCP PHASE1:Hg19::chr10:30876500..30876531,-: Difference between revisions
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|id=chr10:30876500..30876531,-
|short_description=p@chr10:30876500..30876531,-
|description=CAGE_peak_at_chr10:30876500..30876531,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:30876500..30876531,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:30876500..30876531,- | |||
|id=chr10:30876500..30876531,- | |||
|ontology_enrichment_celltype=CL:0002057!1.25e-67!42;CL:0000860!9.16e-63!45;CL:0002009!7.68e-45!65;CL:0002194!1.54e-42!63;CL:0000576!1.54e-42!63;CL:0000040!1.54e-42!63;CL:0000559!1.54e-42!63;CL:0000766!6.50e-41!76;CL:0000557!1.22e-40!71;CL:0000738!9.62e-39!140;CL:0002087!3.52e-38!119;CL:0000839!8.18e-38!70;CL:0002031!6.63e-34!124;CL:0000037!2.53e-30!172;CL:0000566!2.53e-30!172;CL:0000763!2.24e-28!112;CL:0000049!2.24e-28!112;CL:0000988!2.70e-28!182;CL:0002032!9.08e-28!165;CL:0000837!9.08e-28!165;CL:0000134!5.10e-11!358;CL:0002320!1.13e-10!365;CL:0000048!1.35e-09!430;CL:0000219!1.88e-09!390;CL:0000723!2.31e-09!436;CL:0000034!4.60e-09!444;CL:0000842!8.19e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.44e-49;33!CL:0002057;1.44e-49;33!CL:0000473;5.95e-35;39!CL:0000234;5.95e-35;39!CL:0000576;2.55e-32;48!CL:0000766;6.23e-23;69!CL:0002393;8.22e-17;6!CL:0002397;8.22e-17;6!CL:0002087;7.66e-14;104!CL:0000763;1.68e-12;100!CL:0000738;4.20e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.70e-65,42;CL:0002057,2.70e-65,42;CL:0000473,6.63e-57,48;CL:0000234,6.63e-57,48;CL:0002009,2.37e-49,61;CL:0002194,3.76e-45,59;CL:0000576,3.76e-45,59;CL:0000040,3.76e-45,59;CL:0000559,3.76e-45,59;CL:0000557,7.93e-45,67;CL:0000766,1.20e-41,72;CL:0000839,3.10e-40,66;CL:0000763,1.07e-30,108;CL:0000049,1.07e-30,108;CL:0002031,2.61e-24,120;CL:0000738,5.34e-24,136;CL:0002087,2.13e-22,115;CL:0002032,5.76e-20,161;CL:0000837,5.76e-20,161;CL:0000037,4.75e-19,168;CL:0000988,5.62e-18,177;CL:0002393,2.18e-11,9;CL:0002397,2.18e-11,9;CL:0000134,7.48e-08,354;CL:0002320,1.18e-07,361;CL:0000219,5.99e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.62e-44;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.66e-35!80;UBERON:0001474!1.13e-32!86;UBERON:0002390!1.08e-31!102;UBERON:0003061!1.08e-31!102;UBERON:0002193!1.03e-30!112;UBERON:0002405!2.32e-27!115;UBERON:0004765!4.75e-27!101;UBERON:0001434!4.75e-27!101;UBERON:0002204!1.27e-15!167;UBERON:0003081!4.36e-13!216;UBERON:0002384!3.35e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.33e-39,76;UBERON:0001474,2.26e-36,82;UBERON:0004765,5.34e-33,90;UBERON:0002405,7.00e-32,93;UBERON:0002390,3.61e-30,98;UBERON:0003061,3.61e-30,98;UBERON:0001434,1.57e-29,100;UBERON:0002193,3.25e-27,108;UBERON:0002204,6.54e-17,167;UBERON:0003081,1.55e-13,203;UBERON:0000926,6.58e-08,315;UBERON:0004120,6.58e-08,315;UBERON:0006603,6.58e-08,315;UBERON:0002384,2.22e-07,371 | |||
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|short_description=p@chr10:30876500..30876531,- | |||
}} | }} |
Latest revision as of 13:10, 23 July 2015
Short description: | p@chr10:30876500..30876531, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:30876500..30876531, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.70e-65 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.70e-65 | 42 |
defensive cell | 6.63e-57 | 48 |
phagocyte | 6.63e-57 | 48 |
macrophage dendritic cell progenitor | 2.37e-49 | 61 |
monopoietic cell | 3.76e-45 | 59 |
monocyte | 3.76e-45 | 59 |
monoblast | 3.76e-45 | 59 |
promonocyte | 3.76e-45 | 59 |
granulocyte monocyte progenitor cell | 7.93e-45 | 67 |
myeloid leukocyte | 1.20e-41 | 72 |
myeloid lineage restricted progenitor cell | 3.10e-40 | 66 |
myeloid cell | 1.07e-30 | 108 |
common myeloid progenitor | 1.07e-30 | 108 |
hematopoietic lineage restricted progenitor cell | 2.61e-24 | 120 |
leukocyte | 5.34e-24 | 136 |
nongranular leukocyte | 2.13e-22 | 115 |
hematopoietic oligopotent progenitor cell | 5.76e-20 | 161 |
hematopoietic multipotent progenitor cell | 5.76e-20 | 161 |
hematopoietic stem cell | 4.75e-19 | 168 |
hematopoietic cell | 5.62e-18 | 177 |
intermediate monocyte | 2.18e-11 | 9 |
CD14-positive, CD16-positive monocyte | 2.18e-11 | 9 |
mesenchymal cell | 7.48e-08 | 354 |
connective tissue cell | 1.18e-07 | 361 |
motile cell | 5.99e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.33e-39 | 76 |
bone element | 2.26e-36 | 82 |
skeletal element | 5.34e-33 | 90 |
immune system | 7.00e-32 | 93 |
hematopoietic system | 3.61e-30 | 98 |
blood island | 3.61e-30 | 98 |
skeletal system | 1.57e-29 | 100 |
hemolymphoid system | 3.25e-27 | 108 |
musculoskeletal system | 6.54e-17 | 167 |
lateral plate mesoderm | 1.55e-13 | 203 |
mesoderm | 6.58e-08 | 315 |
mesoderm-derived structure | 6.58e-08 | 315 |
presumptive mesoderm | 6.58e-08 | 315 |
connective tissue | 2.22e-07 | 371 |