FFCP PHASE1:Hg19::chr10:3807404..3807414,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:3807404..3807414,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr10:3807404..3807414,- | |description=CAGE_peak_at_chr10:3807404..3807414,- | ||
|id=chr10:3807404..3807414,- | |id=chr10:3807404..3807414,- | ||
|ontology_enrichment_celltype=CL:0002057!8.30e-42!42;CL:0000860!1.20e-38!45;CL:0000766!7.00e-35!76;CL:0000738!8.16e-31!140;CL:0002194!5.16e-28!63;CL:0000576!5.16e-28!63;CL:0000040!5.16e-28!63;CL:0000559!5.16e-28!63;CL:0000839!5.41e-27!70;CL:0002009!5.46e-27!65;CL:0002087!1.14e-26!119;CL:0000557!1.56e-26!71;CL:0002031!2.64e-25!124;CL:0000037!3.99e-25!172;CL:0000566!3.99e-25!172;CL:0002032!5.89e-25!165;CL:0000837!5.89e-25!165;CL:0000763!2.24e-23!112;CL:0000049!2.24e-23!112;CL:0000988!2.83e-23!182;CL:0000623!1.91e-12!3;CL:0000825!1.91e-12!3;CL:0000134!4.68e-09!358;CL:0000094!7.83e-09!8;CL:0002320!1.03e-08!365;CL:0000219!1.64e-07!390;CL:0000775!7.69e-07!3 | |ontology_enrichment_celltype=CL:0002057!8.30e-42!42;CL:0000860!1.20e-38!45;CL:0000766!7.00e-35!76;CL:0000738!8.16e-31!140;CL:0002194!5.16e-28!63;CL:0000576!5.16e-28!63;CL:0000040!5.16e-28!63;CL:0000559!5.16e-28!63;CL:0000839!5.41e-27!70;CL:0002009!5.46e-27!65;CL:0002087!1.14e-26!119;CL:0000557!1.56e-26!71;CL:0002031!2.64e-25!124;CL:0000037!3.99e-25!172;CL:0000566!3.99e-25!172;CL:0002032!5.89e-25!165;CL:0000837!5.89e-25!165;CL:0000763!2.24e-23!112;CL:0000049!2.24e-23!112;CL:0000988!2.83e-23!182;CL:0000623!1.91e-12!3;CL:0000825!1.91e-12!3;CL:0000134!4.68e-09!358;CL:0000094!7.83e-09!8;CL:0002320!1.03e-08!365;CL:0000219!1.64e-07!390;CL:0000775!7.69e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000775;1.26e-30;3!CL:0000094;1.03e-25;8!CL:0000860;1.13e-21;33!CL:0002057;1.13e-21;33!CL:0000081;6.39e-19;11!CL:0000473;1.94e-17;39!CL:0000234;1.94e-17;39!CL:0000766;3.45e-15;69!CL:0000771;1.65e-12;2!CL:0000576;2.22e-10;48!CL:0000763;6.29e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.26e-30,3;CL:0000094,1.03e-25,8;CL:0000766,3.60e-24,72;CL:0000081,6.40e-19,11;CL:0000860,9.37e-19,42;CL:0002057,9.37e-19,42;CL:0000473,2.01e-16,48;CL:0000234,2.01e-16,48;CL:0000763,3.81e-16,108;CL:0000049,3.81e-16,108;CL:0002194,3.78e-13,59;CL:0000576,3.78e-13,59;CL:0000040,3.78e-13,59;CL:0000559,3.78e-13,59;CL:0000738,8.37e-13,136;CL:0002009,1.00e-12,61;CL:0000771,1.65e-12,2;CL:0000839,8.90e-12,66;CL:0000557,1.33e-11,67;CL:0002032,8.68e-11,161;CL:0000837,8.68e-11,161;CL:0000037,2.50e-10,168;CL:0000988,8.62e-10,177;CL:0002087,8.95e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;6.17e-14;42!CL:0000049;1.19e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.57e-24!102;UBERON:0003061!9.57e-24!102;UBERON:0002371!6.40e-23!80;UBERON:0002193!7.00e-23!112;UBERON:0001474!6.28e-21!86;UBERON:0002405!3.69e-17!115;UBERON:0004765!5.54e-17!101;UBERON:0001434!5.54e-17!101;UBERON:0002204!4.84e-09!167;UBERON:0003081!1.16e-08!216;UBERON:0002384!3.01e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.02e-10,76;UBERON:0001474,1.67e-09,82;UBERON:0004765,1.16e-08,90;UBERON:0002405,2.20e-08,93;UBERON:0002390,5.89e-08,98;UBERON:0003061,5.89e-08,98;UBERON:0001434,8.50e-08,100;UBERON:0002193,3.23e-07,108 | |||
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|short_description=p@chr10:3807404..3807414,- | |short_description=p@chr10:3807404..3807414,- | ||
}} | }} |
Latest revision as of 13:29, 23 July 2015
Short description: | p@chr10:3807404..3807414, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:3807404..3807414, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.26e-30 | 3 |
granulocyte | 1.03e-25 | 8 |
myeloid leukocyte | 3.60e-24 | 72 |
blood cell | 6.40e-19 | 11 |
classical monocyte | 9.37e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.37e-19 | 42 |
defensive cell | 2.01e-16 | 48 |
phagocyte | 2.01e-16 | 48 |
myeloid cell | 3.81e-16 | 108 |
common myeloid progenitor | 3.81e-16 | 108 |
monopoietic cell | 3.78e-13 | 59 |
monocyte | 3.78e-13 | 59 |
monoblast | 3.78e-13 | 59 |
promonocyte | 3.78e-13 | 59 |
leukocyte | 8.37e-13 | 136 |
macrophage dendritic cell progenitor | 1.00e-12 | 61 |
eosinophil | 1.65e-12 | 2 |
myeloid lineage restricted progenitor cell | 8.90e-12 | 66 |
granulocyte monocyte progenitor cell | 1.33e-11 | 67 |
hematopoietic oligopotent progenitor cell | 8.68e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.68e-11 | 161 |
hematopoietic stem cell | 2.50e-10 | 168 |
hematopoietic cell | 8.62e-10 | 177 |
nongranular leukocyte | 8.95e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.02e-10 | 76 |
bone element | 1.67e-09 | 82 |
skeletal element | 1.16e-08 | 90 |
immune system | 2.20e-08 | 93 |
hematopoietic system | 5.89e-08 | 98 |
blood island | 5.89e-08 | 98 |
skeletal system | 8.50e-08 | 100 |
hemolymphoid system | 3.23e-07 | 108 |