FFCP PHASE1:Hg19::chr10:88280520..88280524,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:88280520..88280524,- | |||
|id=chr10:88280520..88280524,- | |||
|ontology_enrichment_celltype=CL:0000037!8.81e-26!172;CL:0000566!8.81e-26!172;CL:0002032!3.15e-25!165;CL:0000837!3.15e-25!165;CL:0000738!1.26e-24!140;CL:0000988!1.77e-24!182;CL:0002031!6.24e-23!124;CL:0002087!2.24e-22!119;CL:0002057!2.16e-20!42;CL:0000860!3.60e-20!45;CL:0000763!2.29e-18!112;CL:0000049!2.29e-18!112;CL:0000766!1.48e-17!76;CL:0000557!1.01e-16!71;CL:0002009!1.29e-16!65;CL:0000839!4.70e-16!70;CL:0002194!1.18e-15!63;CL:0000576!1.18e-15!63;CL:0000040!1.18e-15!63;CL:0000559!1.18e-15!63;CL:0000134!1.91e-08!358;CL:0000219!1.47e-07!390;CL:0002320!4.87e-07!365;CL:0000838!8.23e-07!52;CL:0000542!8.68e-07!53;CL:0000051!8.68e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.13e-25;33!CL:0002057;4.13e-25;33!CL:0000576;2.03e-21;48!CL:0000473;3.55e-20;39!CL:0000234;3.55e-20;39!CL:0000766;4.96e-13;69!CL:0002087;1.92e-09;104!CL:0000738;3.93e-08;136!CL:0000763;1.19e-07;100!CL:0000988;2.95e-07;177!CL:0002393;5.35e-07;6!CL:0002397;5.35e-07;6!CL:0000624;8.44e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.59e-38,42;CL:0002057,1.59e-38,42;CL:0000473,9.08e-37,48;CL:0000234,9.08e-37,48;CL:0000738,1.45e-32,136;CL:0002087,1.59e-32,115;CL:0002009,1.76e-32,61;CL:0002031,1.35e-31,120;CL:0000037,6.48e-31,168;CL:0000988,2.57e-30,177;CL:0002194,3.30e-30,59;CL:0000576,3.30e-30,59;CL:0000040,3.30e-30,59;CL:0000559,3.30e-30,59;CL:0000557,5.09e-30,67;CL:0002032,1.46e-29,161;CL:0000837,1.46e-29,161;CL:0000766,2.91e-29,72;CL:0000839,3.89e-27,66;CL:0000763,9.13e-25,108;CL:0000049,9.13e-25,108;CL:0002393,1.02e-11,9;CL:0002397,1.02e-11,9;CL:0000134,1.29e-11,354;CL:0002320,5.77e-11,361;CL:0000219,3.81e-09,386;CL:0000624,4.57e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.18e-27;42!CL:0000049;1.81e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.15e-17!102;UBERON:0003061!3.15e-17!102;UBERON:0001474!1.84e-14!86;UBERON:0002193!2.52e-14!112;UBERON:0002371!3.08e-14!80;UBERON:0004765!3.62e-11!101;UBERON:0001434!3.62e-11!101;UBERON:0002405!6.11e-09!115;UBERON:0002384!7.84e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.76e-29,98;UBERON:0003061,3.76e-29,98;UBERON:0002371,2.07e-26,76;UBERON:0002193,5.47e-25,108;UBERON:0001474,9.64e-25,82;UBERON:0002405,2.21e-21,93;UBERON:0004765,2.29e-21,90;UBERON:0001434,6.17e-18,100;UBERON:0003081,1.60e-10,203;UBERON:0002384,4.34e-10,371;UBERON:0002204,3.26e-07,167 | |||
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| |||
|short_description=p@chr10:88280520..88280524,- | |||
}} |
Revision as of 03:54, 11 January 2014
Short description: | p@chr10:88280520..88280524, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:88280520..88280524, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.59e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.59e-38 | 42 |
defensive cell | 9.08e-37 | 48 |
phagocyte | 9.08e-37 | 48 |
leukocyte | 1.45e-32 | 136 |
nongranular leukocyte | 1.59e-32 | 115 |
macrophage dendritic cell progenitor | 1.76e-32 | 61 |
hematopoietic lineage restricted progenitor cell | 1.35e-31 | 120 |
hematopoietic stem cell | 6.48e-31 | 168 |
hematopoietic cell | 2.57e-30 | 177 |
monopoietic cell | 3.30e-30 | 59 |
monocyte | 3.30e-30 | 59 |
monoblast | 3.30e-30 | 59 |
promonocyte | 3.30e-30 | 59 |
granulocyte monocyte progenitor cell | 5.09e-30 | 67 |
hematopoietic oligopotent progenitor cell | 1.46e-29 | 161 |
hematopoietic multipotent progenitor cell | 1.46e-29 | 161 |
myeloid leukocyte | 2.91e-29 | 72 |
myeloid lineage restricted progenitor cell | 3.89e-27 | 66 |
myeloid cell | 9.13e-25 | 108 |
common myeloid progenitor | 9.13e-25 | 108 |
intermediate monocyte | 1.02e-11 | 9 |
CD14-positive, CD16-positive monocyte | 1.02e-11 | 9 |
mesenchymal cell | 1.29e-11 | 354 |
connective tissue cell | 5.77e-11 | 361 |
motile cell | 3.81e-09 | 386 |
CD4-positive, alpha-beta T cell | 4.57e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.76e-29 | 98 |
blood island | 3.76e-29 | 98 |
bone marrow | 2.07e-26 | 76 |
hemolymphoid system | 5.47e-25 | 108 |
bone element | 9.64e-25 | 82 |
immune system | 2.21e-21 | 93 |
skeletal element | 2.29e-21 | 90 |
skeletal system | 6.17e-18 | 100 |
lateral plate mesoderm | 1.60e-10 | 203 |
connective tissue | 4.34e-10 | 371 |
musculoskeletal system | 3.26e-07 | 167 |