FFCP PHASE1:Hg19::chr12:9801269..9801287,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:9801269..9801287,+|id=chr12:9801269..9801287,+|ontology_enrichment_celltype=CL:0002057!1.23e-14!42;CL:0002009!7.95e-13!65;CL:0000860!7.99e-13!45;CL:0002087!1.40e-12!119;CL:0000557!2.56e-12!71;CL:0002031!3.75e-12!124;CL:0002194!9.35e-12!63;CL:0000576!9.35e-12!63;CL:0000040!9.35e-12!63;CL:0000559!9.35e-12!63;CL:0000738!2.53e-11!140;CL:0000839!6.31e-11!70;CL:0000766!8.92e-10!76;CL:0000037!2.55e-09!172;CL:0000566!2.55e-09!172;CL:0002032!1.21e-08!165;CL:0000837!1.21e-08!165;CL:0000988!1.25e-07!182;CL:0000763!2.39e-07!112;CL:0000049!2.39e-07!112|ontology_enrichment_celltype_v019=CL:0000860;8.17e-18;33!CL:0002057;8.17e-18;33!CL:0000473;3.14e-16;39!CL:0000234;3.14e-16;39!CL:0000576;2.24e-10;48!CL:0000766;6.81e-10;69|ontology_enrichment_celltype_v019_2=CL:0000473,1.33e-20,48;CL:0000234,1.33e-20,48;CL:0000860,8.52e-19,42;CL:0002057,8.52e-19,42;CL:0002194,1.97e-17,59;CL:0000576,1.97e-17,59;CL:0000040,1.97e-17,59;CL:0000559,1.97e-17,59;CL:0002009,1.03e-16,61;CL:0000839,4.17e-15,66;CL:0000766,4.61e-15,72;CL:0000557,8.17e-15,67;CL:0002087,1.03e-09,115;CL:0000763,1.74e-08,108;CL:0000049,1.74e-08,108;CL:0000738,2.66e-08,136;CL:0002031,4.24e-08,120|ontology_enrichment_development_v019=CL:0002057;1.70e-13;42!UBERON:0007297;9.21e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1749;9.17e-15;14|ontology_enrichment_disease_v019_2=DOID:1749,8.76e-15,14|ontology_enrichment_uberon=UBERON:0002371!2.78e-09!80;UBERON:0001474!1.04e-08!86;UBERON:0002390!3.54e-07!102;UBERON:0003061!3.54e-07!102|ontology_enrichment_uberon_v019=UBERON:0003343;1.76e-08;4!UBERON:0004785;1.76e-08;4|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.58e-12,76;UBERON:0001474,2.75e-11,82;UBERON:0004765,4.34e-11,90;UBERON:0002390,7.19e-10,98;UBERON:0003061,7.19e-10,98;UBERON:0001434,1.62e-09,100;UBERON:0002405,1.97e-09,93;UBERON:0002193,1.56e-08,108;UBERON:0003343,2.27e-08,4;UBERON:0004785,2.27e-08,4|phase1_expression=0.363356758541113,0,0.422863212287913,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0.487932798790507,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0.739508020333575,0.0774672005803016,0,0,1.66198622559563,0.802177789880567,1.08505435357926,0,1.29557466407592,0.257575567634187,0.145398238779565,1.13362783106643,0.242584061187816,0.697287110717054,0,2.47765096716083,0,0.768482119587302,0,3.10271112662957,1.93645405075148,4.06279459783025,0,0.272906150057846,0.674170453335254,3.36692281607993,3.85114832491312,2.55734850319616,0,0.398927315243264,0,4.35313857942876,3.40431134814684,3.73693349397345,0,0,0,2.42159801053347,3.68277635987565,5.69632297393592,0.211255286311942,0.425208599930087,0.628975936525128,0.44931452458598,0.150176892841506,0.16072558669708,0.570025487482497,0.39783335439818,0.182664153764634,0,0.546138611262131,0,0.426730222566507,0.800791974072025,0.574752439954483,0,0,1.70763890732835,0,0.382273228125229,0,0.560508562981536,0.263384084775077,0.393419540227666,0,0,0.334372990781356,0.32592226663359,0.473447805734733,0,0.334231370655521,0,0.221533894583621,0.270803863765016,0,0,0.822189523018381,1.10540007114339,0.289803085735052,0.14828656316206,0.267540828089713,0,0,0.766440987203842,0.68725489096526,1.01207876807801,0.318565414324097,0,0.950452044448374,0.150575119077773,0.511946444617674,1.24930726552346,0.473554504088034,0,0.403213486449465,0,0.434473211648397,0,0,0,0,0,0.289693037921647,0,0.486634870302636,0,0.443458794925128,0.087834785693126,0.327447688744282,0,0.370784442784429,0,0,0.398873881556595,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0.402829317109147,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0.206105058476878,0,0,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0.355009592516614,0.10075209822764,0,0.773043412653187,0.818238361772504,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,1.48141512253647,0,0,0,0,0,0.288732895522148,0,0,0.790204397959275,0.858486162094873,2.21595305478658,0.468008530278475,0.891786973732369,0.93733833986777,0,1.27597587518148,0.447792613514241,0.290633938513962,0,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0.063497894292169,0,0,0,0.102827492703324,1.20137223137567,0.571652865261156,0,0,0,0.904902010304444,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0,0.394061520403854,0.431255149719035,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0.902838299183157,0,0,0.664225598535437,0,0.260650843404249,0,0,0.413536052245775,1.94142780736755,0.320182673410333,0,0,0,0.248107807818777,1.53461973288062,0,0.256278298511402,1.02341449813341,0.321707842287215,1.48418066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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:9801269..9801287,+ | |||
|id=chr12:9801269..9801287,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.23e-14!42;CL:0002009!7.95e-13!65;CL:0000860!7.99e-13!45;CL:0002087!1.40e-12!119;CL:0000557!2.56e-12!71;CL:0002031!3.75e-12!124;CL:0002194!9.35e-12!63;CL:0000576!9.35e-12!63;CL:0000040!9.35e-12!63;CL:0000559!9.35e-12!63;CL:0000738!2.53e-11!140;CL:0000839!6.31e-11!70;CL:0000766!8.92e-10!76;CL:0000037!2.55e-09!172;CL:0000566!2.55e-09!172;CL:0002032!1.21e-08!165;CL:0000837!1.21e-08!165;CL:0000988!1.25e-07!182;CL:0000763!2.39e-07!112;CL:0000049!2.39e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.17e-18;33!CL:0002057;8.17e-18;33!CL:0000473;3.14e-16;39!CL:0000234;3.14e-16;39!CL:0000576;2.24e-10;48!CL:0000766;6.81e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.33e-20,48;CL:0000234,1.33e-20,48;CL:0000860,8.52e-19,42;CL:0002057,8.52e-19,42;CL:0002194,1.97e-17,59;CL:0000576,1.97e-17,59;CL:0000040,1.97e-17,59;CL:0000559,1.97e-17,59;CL:0002009,1.03e-16,61;CL:0000839,4.17e-15,66;CL:0000766,4.61e-15,72;CL:0000557,8.17e-15,67;CL:0002087,1.03e-09,115;CL:0000763,1.74e-08,108;CL:0000049,1.74e-08,108;CL:0000738,2.66e-08,136;CL:0002031,4.24e-08,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.70e-13;42!UBERON:0007297;9.21e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;9.17e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,8.76e-15,14 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.78e-09!80;UBERON:0001474!1.04e-08!86;UBERON:0002390!3.54e-07!102;UBERON:0003061!3.54e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;1.76e-08;4!UBERON:0004785;1.76e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.58e-12,76;UBERON:0001474,2.75e-11,82;UBERON:0004765,4.34e-11,90;UBERON:0002390,7.19e-10,98;UBERON:0003061,7.19e-10,98;UBERON:0001434,1.62e-09,100;UBERON:0002405,1.97e-09,93;UBERON:0002193,1.56e-08,108;UBERON:0003343,2.27e-08,4;UBERON:0004785,2.27e-08,4 | |||
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| |||
|short_description=p@chr12:9801269..9801287,+ | |||
}} |
Revision as of 01:11, 11 September 2013
Short description: | p@chr12:9801269..9801287, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:9801269..9801287, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.33e-20 | 48 |
phagocyte | 1.33e-20 | 48 |
classical monocyte | 8.52e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.52e-19 | 42 |
monopoietic cell | 1.97e-17 | 59 |
monocyte | 1.97e-17 | 59 |
monoblast | 1.97e-17 | 59 |
promonocyte | 1.97e-17 | 59 |
macrophage dendritic cell progenitor | 1.03e-16 | 61 |
myeloid lineage restricted progenitor cell | 4.17e-15 | 66 |
myeloid leukocyte | 4.61e-15 | 72 |
granulocyte monocyte progenitor cell | 8.17e-15 | 67 |
nongranular leukocyte | 1.03e-09 | 115 |
myeloid cell | 1.74e-08 | 108 |
common myeloid progenitor | 1.74e-08 | 108 |
leukocyte | 2.66e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 4.24e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.58e-12 | 76 |
bone element | 2.75e-11 | 82 |
skeletal element | 4.34e-11 | 90 |
hematopoietic system | 7.19e-10 | 98 |
blood island | 7.19e-10 | 98 |
skeletal system | 1.62e-09 | 100 |
immune system | 1.97e-09 | 93 |
hemolymphoid system | 1.56e-08 | 108 |
mucosa of oral region | 2.27e-08 | 4 |
respiratory system mucosa | 2.27e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 8.76e-15 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.