FFCP PHASE1:Hg19::chr1:111768425..111768429,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:111768425..111768429,- | |||
|description=CAGE_peak_at_chr1:111768425..111768429,- | |description=CAGE_peak_at_chr1:111768425..111768429,- | ||
|id=chr1:111768425..111768429,- | |id=chr1:111768425..111768429,- | ||
|ontology_enrichment_celltype=CL:0000791!8.69e-28!18;CL:0000789!8.69e-28!18;CL:0002420!8.69e-28!18;CL:0002419!8.69e-28!18;CL:0000790!8.69e-28!18;CL:0000084!9.29e-25!25;CL:0000827!9.29e-25!25;CL:0000623!1.54e-24!3;CL:0000825!1.54e-24!3;CL:0000624!5.48e-22!6;CL:0000838!3.83e-20!52;CL:0000542!1.00e-19!53;CL:0000051!1.00e-19!53;CL:0000625!5.11e-12!11;CL:0002087!5.43e-09!119;CL:0000738!2.59e-07!140;CL:0002031!3.56e-07!124 | |ontology_enrichment_celltype=CL:0000791!8.69e-28!18;CL:0000789!8.69e-28!18;CL:0002420!8.69e-28!18;CL:0002419!8.69e-28!18;CL:0000790!8.69e-28!18;CL:0000084!9.29e-25!25;CL:0000827!9.29e-25!25;CL:0000623!1.54e-24!3;CL:0000825!1.54e-24!3;CL:0000624!5.48e-22!6;CL:0000838!3.83e-20!52;CL:0000542!1.00e-19!53;CL:0000051!1.00e-19!53;CL:0000625!5.11e-12!11;CL:0002087!5.43e-09!119;CL:0000738!2.59e-07!140;CL:0002031!3.56e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000625;2.27e-10;11!CL:0000791;7.39e-07;18!CL:0000789;7.39e-07;18!CL:0002419;7.39e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.37e-10,11;CL:0000791,7.60e-07,18;CL:0000789,7.60e-07,18;CL:0002420,7.60e-07,18;CL:0002419,7.60e-07,18;CL:0000790,7.60e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;7.39e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002372!1.69e-09!1;UBERON:0001961!1.69e-09!1;UBERON:0001744!1.69e-09!1;UBERON:0001735!1.69e-09!1 | |ontology_enrichment_uberon=UBERON:0002372!1.69e-09!1;UBERON:0001961!1.69e-09!1;UBERON:0001744!1.69e-09!1;UBERON:0001735!1.69e-09!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.52e-50;2!UBERON:0005058;3.52e-50;2!UBERON:0009113;3.52e-50;2!UBERON:0004177;4.66e-21;5!UBERON:0005057;4.66e-21;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.56e-26,4;UBERON:0005058,5.56e-26,4;UBERON:0009113,5.56e-26,4;UBERON:0003295,5.56e-26,4;UBERON:0005562,5.56e-26,4;UBERON:0003351,7.67e-18,6;UBERON:0004177,1.65e-15,7;UBERON:0005057,1.65e-15,7;UBERON:0000974,2.73e-11,10;UBERON:0003408,2.73e-11,10;UBERON:0001042,2.73e-11,10;UBERON:0009145,2.73e-11,10;UBERON:0006562,2.16e-10,11;UBERON:0009722,2.16e-10,11;UBERON:0007690,2.16e-10,11;UBERON:0008814,7.18e-07,18 | |||
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|short_description=p@chr1:111768425..111768429,- | |short_description=p@chr1:111768425..111768429,- | ||
}} | }} |
Latest revision as of 19:40, 27 July 2015
Short description: | p@chr1:111768425..111768429, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:111768425..111768429, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.37e-10 | 11 |
mature alpha-beta T cell | 7.60e-07 | 18 |
alpha-beta T cell | 7.60e-07 | 18 |
immature T cell | 7.60e-07 | 18 |
mature T cell | 7.60e-07 | 18 |
immature alpha-beta T cell | 7.60e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.56e-26 | 4 |
hemolymphoid system gland | 5.56e-26 | 4 |
thymic region | 5.56e-26 | 4 |
pharyngeal gland | 5.56e-26 | 4 |
thymus primordium | 5.56e-26 | 4 |
pharyngeal epithelium | 7.67e-18 | 6 |
hemopoietic organ | 1.65e-15 | 7 |
immune organ | 1.65e-15 | 7 |
neck | 2.73e-11 | 10 |
gland of gut | 2.73e-11 | 10 |
chordate pharynx | 2.73e-11 | 10 |
pharyngeal region of foregut | 2.73e-11 | 10 |
pharynx | 2.16e-10 | 11 |
entire pharyngeal arch endoderm | 2.16e-10 | 11 |
early pharyngeal endoderm | 2.16e-10 | 11 |
pharyngeal arch system | 7.18e-07 | 18 |