FFCP PHASE1:Hg19::chr1:183177076..183177103,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:183177076..183177103,+ | |||
|coexpression_cluster_id=C571 | |coexpression_cluster_id=C571 | ||
|description=CAGE_peak_at_chr1:183177076..183177103,+ | |description=CAGE_peak_at_chr1:183177076..183177103,+ | ||
|id=chr1:183177076..183177103,+ | |id=chr1:183177076..183177103,+ | ||
|ontology_enrichment_celltype=CL:0002076!8.68e-34!43;CL:0000066!4.37e-30!254;CL:0000223!2.32e-24!59;CL:0002368!6.19e-22!13;CL:0002251!1.27e-15!21;CL:0002159!9.68e-15!13;CL:0002202!2.90e-13!9;CL:0002632!2.90e-13!9;CL:0000244!1.50e-10!4;CL:0000731!1.50e-10!4;CL:0000220!3.89e-10!246;CL:0002321!5.85e-10!248;CL:0002621!7.56e-09!3;CL:0002166!1.10e-08!3;CL:0002328!1.18e-08!3;CL:0000068!1.21e-08!3;CL:0000069!1.21e-08!3;CL:0000307!1.21e-08!3;CL:0000377!1.21e-08!3;CL:0002077!2.67e-08!33;CL:0000622!4.39e-08!5;CL:0000362!5.99e-08!8 | |ontology_enrichment_celltype=CL:0002076!8.68e-34!43;CL:0000066!4.37e-30!254;CL:0000223!2.32e-24!59;CL:0002368!6.19e-22!13;CL:0002251!1.27e-15!21;CL:0002159!9.68e-15!13;CL:0002202!2.90e-13!9;CL:0002632!2.90e-13!9;CL:0000244!1.50e-10!4;CL:0000731!1.50e-10!4;CL:0000220!3.89e-10!246;CL:0002321!5.85e-10!248;CL:0002621!7.56e-09!3;CL:0002166!1.10e-08!3;CL:0002328!1.18e-08!3;CL:0000068!1.21e-08!3;CL:0000069!1.21e-08!3;CL:0000307!1.21e-08!3;CL:0000377!1.21e-08!3;CL:0002077!2.67e-08!33;CL:0000622!4.39e-08!5;CL:0000362!5.99e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0002368;8.03e-41;13!CL:0002159;3.41e-37;14!CL:0002076;1.87e-23;42!CL:0002621;1.33e-21;3!CL:0000307;4.28e-21;3!CL:0002166;4.74e-21;3!CL:0002202;4.11e-19;9!CL:0002632;4.11e-19;9!CL:0000362;1.98e-18;9!CL:0000244;1.10e-15;4!CL:0000731;1.10e-15;4!CL:0000317;1.12e-14;2!CL:1000448;1.12e-14;2!CL:0002308;1.12e-14;2!CL:0002140;1.12e-14;2!CL:0002077;2.94e-13;34!CL:0000312;1.88e-12;5!CL:0000240;1.83e-10;6!CL:0000311;1.83e-10;6!CL:0000079;1.83e-10;6!CL:0000237;1.83e-10;6!CL:0002328;1.97e-10;3!CL:0002252;8.98e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.01e-40,13;CL:0002159,2.87e-37,14;CL:0002076,7.60e-29,42;CL:0002621,1.38e-21,3;CL:0002166,3.87e-21,3;CL:0000068,5.08e-21,3;CL:0000069,5.08e-21,3;CL:0000307,5.08e-21,3;CL:0000377,5.08e-21,3;CL:0000223,3.91e-20,58;CL:0002202,4.60e-19,9;CL:0002632,4.60e-19,9;CL:0000066,5.36e-19,253;CL:0000362,2.17e-18,9;CL:0000244,9.71e-16,4;CL:0000731,9.71e-16,4;CL:0000317,1.20e-14,2;CL:1000448,1.20e-14,2;CL:0002308,1.20e-14,2;CL:0002140,1.20e-14,2;CL:0002077,1.57e-14,34;CL:0000312,2.00e-12,5;CL:0000240,1.93e-10,6;CL:0000311,1.93e-10,6;CL:0000079,1.93e-10,6;CL:0000237,1.93e-10,6;CL:0000036,1.93e-10,6;CL:0000357,1.93e-10,6;CL:0000114,1.93e-10,6;CL:0002328,2.01e-10,3;CL:0002321,9.69e-10,250;CL:0002252,1.21e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000377;4.28e-21;3!CL:0000223;3.21e-13;58!CL:0000357;1.83e-10;6!CL:0000114;1.83e-10;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003729!8.41e-11!5;UBERON:0001004!2.44e-10!72;UBERON:0004119!8.60e-10!169;UBERON:0000925!8.60e-10!169;UBERON:0006595!8.60e-10!169;UBERON:0003343!4.85e-09!4;UBERON:0004785!4.85e-09!4;UBERON:0001949!7.56e-09!3;UBERON:0004815!1.18e-08!3;UBERON:0002031!1.18e-08!3;UBERON:0000365!2.04e-08!5;UBERON:0007196!4.59e-08!14;UBERON:0001558!4.59e-08!14;UBERON:0000344!6.79e-08!12;UBERON:0000166!1.80e-07!21;UBERON:0005910!5.45e-07!6 | |ontology_enrichment_uberon=UBERON:0003729!8.41e-11!5;UBERON:0001004!2.44e-10!72;UBERON:0004119!8.60e-10!169;UBERON:0000925!8.60e-10!169;UBERON:0006595!8.60e-10!169;UBERON:0003343!4.85e-09!4;UBERON:0004785!4.85e-09!4;UBERON:0001949!7.56e-09!3;UBERON:0004815!1.18e-08!3;UBERON:0002031!1.18e-08!3;UBERON:0000365!2.04e-08!5;UBERON:0007196!4.59e-08!14;UBERON:0001558!4.59e-08!14;UBERON:0000344!6.79e-08!12;UBERON:0000166!1.80e-07!21;UBERON:0005910!5.45e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.33e-21;3!UBERON:0000486;4.90e-20;12!UBERON:0001708;6.16e-16;4!UBERON:0008895;6.16e-16;4!UBERON:0002419;1.12e-14;2!UBERON:0007771;1.12e-14;2!UBERON:0003297;1.12e-14;2!UBERON:0001821;1.12e-14;2!UBERON:0003487;1.12e-14;2!UBERON:0001820;1.12e-14;2!UBERON:0011159;7.38e-13;5!UBERON:0010371;9.69e-13;31!UBERON:0000365;1.17e-12;5!UBERON:0007196;2.16e-11;15!UBERON:0001558;2.16e-11;15!UBERON:0001003;5.43e-11;15!UBERON:0007376;5.43e-11;15!UBERON:0005910;1.24e-10;6!UBERON:0004815;1.97e-10;3!UBERON:0002031;1.97e-10;3!UBERON:0003929;1.48e-09;7!UBERON:0003126;2.41e-09;7!UBERON:0001005;2.41e-09;7!UBERON:0000065;8.37e-09;44!UBERON:0005911;1.03e-08;36!UBERON:0003350;2.04e-08;8!UBERON:0001828;2.04e-08;8!UBERON:0004807;8.53e-08;22!UBERON:0005178;8.15e-07;34!UBERON:0002224;8.15e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.38e-21,3;UBERON:0001708,5.30e-16,4;UBERON:0008895,5.30e-16,4;UBERON:0002419,1.20e-14,2;UBERON:0007771,1.20e-14,2;UBERON:0003297,1.20e-14,2;UBERON:0001821,1.20e-14,2;UBERON:0003487,1.20e-14,2;UBERON:0001820,1.20e-14,2;UBERON:0005089,1.20e-14,2;UBERON:0005088,1.20e-14,2;UBERON:0011159,6.54e-13,5;UBERON:0000365,1.06e-12,5;UBERON:0007196,2.31e-11,15;UBERON:0001558,2.31e-11,15;UBERON:0001004,5.31e-11,74;UBERON:0001003,5.73e-11,15;UBERON:0007376,5.73e-11,15;UBERON:0007383,5.73e-11,15;UBERON:0010188,7.64e-11,6;UBERON:0002539,7.64e-11,6;UBERON:0008816,7.64e-11,6;UBERON:0005910,1.14e-10,6;UBERON:0004815,2.01e-10,3;UBERON:0002031,2.01e-10,3;UBERON:0003126,2.59e-09,7;UBERON:0001005,2.59e-09,7;UBERON:0003102,4.81e-09,99;UBERON:0004119,9.73e-09,160;UBERON:0000925,9.73e-09,160;UBERON:0006595,9.73e-09,160;UBERON:0000065,9.89e-09,54;UBERON:0003350,2.07e-08,8;UBERON:0001828,2.07e-08,8 | |||
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|short_description=p@chr1:183177076..183177103,+ | |short_description=p@chr1:183177076..183177103,+ | ||
}} | }} |
Latest revision as of 01:08, 28 July 2015
Short description: | p@chr1:183177076..183177103, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:183177076..183177103, + |
Coexpression cluster: | C571_Bronchial_Prostate_Small_Tracheal_Mallassezderived_Urothelial_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.38e-21 | 3 |
jaw skeleton | 5.30e-16 | 4 |
splanchnocranium | 5.30e-16 | 4 |
skin gland | 1.20e-14 | 2 |
epidermis gland | 1.20e-14 | 2 |
gland of integumental system | 1.20e-14 | 2 |
sebaceous gland | 1.20e-14 | 2 |
skin sebaceous gland | 1.20e-14 | 2 |
sweat gland | 1.20e-14 | 2 |
sweat gland placode | 1.20e-14 | 2 |
sebaceous gland placode | 1.20e-14 | 2 |
primary subdivision of cranial skeletal system | 6.54e-13 | 5 |
urothelium | 1.06e-12 | 5 |
tracheobronchial tree | 2.31e-11 | 15 |
lower respiratory tract | 2.31e-11 | 15 |
respiratory system | 5.31e-11 | 74 |
skin epidermis | 5.73e-11 | 15 |
outer epithelium | 5.73e-11 | 15 |
enveloping layer of ectoderm | 5.73e-11 | 15 |
protuberance | 7.64e-11 | 6 |
pharyngeal arch | 7.64e-11 | 6 |
embryonic head | 7.64e-11 | 6 |
transitional epithelium | 1.14e-10 | 6 |
lower respiratory tract epithelium | 2.01e-10 | 3 |
epithelium of bronchus | 2.01e-10 | 3 |
trachea | 2.59e-09 | 7 |
respiratory airway | 2.59e-09 | 7 |
surface structure | 4.81e-09 | 99 |
endoderm-derived structure | 9.73e-09 | 160 |
endoderm | 9.73e-09 | 160 |
presumptive endoderm | 9.73e-09 | 160 |
respiratory tract | 9.89e-09 | 54 |
epithelium of mucosa | 2.07e-08 | 8 |
gingiva | 2.07e-08 | 8 |