FFCP PHASE1:Hg19::chr1:209826575..209826599,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:209826575..209826599,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr1:209826575..209826599,+ | |description=CAGE_peak_at_chr1:209826575..209826599,+ | ||
|id=chr1:209826575..209826599,+ | |id=chr1:209826575..209826599,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.46e-26!42;CL:0000860!2.40e-24!45;CL:0000766!1.85e-22!76;CL:0002009!8.49e-18!65;CL:0000557!3.57e-17!71;CL:0002194!3.40e-15!63;CL:0000576!3.40e-15!63;CL:0000040!3.40e-15!63;CL:0000559!3.40e-15!63;CL:0000763!5.24e-15!112;CL:0000049!5.24e-15!112;CL:0000839!2.14e-14!70;CL:0002076!2.65e-14!43;CL:0000094!2.25e-12!8;CL:0000738!4.07e-12!140;CL:0002368!6.19e-12!13;CL:0000775!1.90e-09!3;CL:0000063!2.07e-09!578;CL:0000223!3.42e-09!59;CL:0000068!6.46e-09!3;CL:0000069!6.46e-09!3;CL:0000307!6.46e-09!3;CL:0000377!6.46e-09!3;CL:0000081!9.51e-09!11;CL:0000037!2.67e-08!172;CL:0000566!2.67e-08!172;CL:0002032!2.99e-08!165;CL:0000837!2.99e-08!165;CL:0002621!6.42e-08!3;CL:0002031!9.22e-08!124;CL:0002202!1.83e-07!9;CL:0002632!1.83e-07!9;CL:0000988!2.09e-07!182;CL:0000771!6.42e-07!2;CL:0002087!8.72e-07!119 | |ontology_enrichment_celltype=CL:0002057!1.46e-26!42;CL:0000860!2.40e-24!45;CL:0000766!1.85e-22!76;CL:0002009!8.49e-18!65;CL:0000557!3.57e-17!71;CL:0002194!3.40e-15!63;CL:0000576!3.40e-15!63;CL:0000040!3.40e-15!63;CL:0000559!3.40e-15!63;CL:0000763!5.24e-15!112;CL:0000049!5.24e-15!112;CL:0000839!2.14e-14!70;CL:0002076!2.65e-14!43;CL:0000094!2.25e-12!8;CL:0000738!4.07e-12!140;CL:0002368!6.19e-12!13;CL:0000775!1.90e-09!3;CL:0000063!2.07e-09!578;CL:0000223!3.42e-09!59;CL:0000068!6.46e-09!3;CL:0000069!6.46e-09!3;CL:0000307!6.46e-09!3;CL:0000377!6.46e-09!3;CL:0000081!9.51e-09!11;CL:0000037!2.67e-08!172;CL:0000566!2.67e-08!172;CL:0002032!2.99e-08!165;CL:0000837!2.99e-08!165;CL:0002621!6.42e-08!3;CL:0002031!9.22e-08!124;CL:0002202!1.83e-07!9;CL:0002632!1.83e-07!9;CL:0000988!2.09e-07!182;CL:0000771!6.42e-07!2;CL:0002087!8.72e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000094;6.51e-26;8!CL:0000775;2.01e-25;3!CL:0000860;4.25e-21;33!CL:0002057;4.25e-21;33!CL:0000081;8.04e-19;11!CL:0000771;7.06e-18;2!CL:0002368;3.32e-15;13!CL:0000473;1.17e-14;39!CL:0000234;1.17e-14;39!CL:0002202;1.74e-14;9!CL:0002632;1.74e-14;9!CL:0000307;8.82e-12;3!CL:0002328;1.47e-11;3!CL:0000766;8.90e-11;69!CL:0000576;4.45e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,5.32e-26,8;CL:0000775,1.45e-25,3;CL:0000766,4.34e-22,72;CL:0000081,6.95e-19,11;CL:0000771,7.07e-18,2;CL:0000860,3.04e-17,42;CL:0002057,3.04e-17,42;CL:0000763,5.14e-16,108;CL:0000049,5.14e-16,108;CL:0002368,3.33e-15,13;CL:0000473,6.81e-15,48;CL:0000234,6.81e-15,48;CL:0002202,1.71e-14,9;CL:0002632,1.71e-14,9;CL:0002009,1.26e-13,61;CL:0000557,2.90e-12,67;CL:0000738,3.78e-12,136;CL:0000068,8.83e-12,3;CL:0000069,8.83e-12,3;CL:0000307,8.83e-12,3;CL:0000377,8.83e-12,3;CL:0002194,1.33e-11,59;CL:0000576,1.33e-11,59;CL:0000040,1.33e-11,59;CL:0000559,1.33e-11,59;CL:0002328,1.43e-11,3;CL:0000839,3.17e-10,66;CL:0002032,7.98e-10,161;CL:0000837,7.98e-10,161;CL:0000037,2.69e-09,168;CL:0000988,1.11e-08,177 | |||
|ontology_enrichment_development_v019=CL:0000377;8.82e-12;3!CL:0002057;2.24e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.79e-14!80;UBERON:0001474!5.40e-13!86;UBERON:0004765!3.90e-12!101;UBERON:0001434!3.90e-12!101;UBERON:0002390!6.05e-11!102;UBERON:0003061!6.05e-11!102;UBERON:0002193!3.26e-10!112;UBERON:0002405!7.31e-09!115;UBERON:0000344!1.44e-08!12;UBERON:0001949!6.42e-08!3;UBERON:0003729!7.08e-08!5;UBERON:0000161!4.03e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.47e-11;3!UBERON:0002031;1.47e-11;3!UBERON:0007196;9.26e-09;15!UBERON:0001558;9.26e-09;15!UBERON:0002185;2.81e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.43e-11,3;UBERON:0002031,1.43e-11,3;UBERON:0002371,1.28e-10,76;UBERON:0001474,1.01e-09,82;UBERON:0007196,9.17e-09,15;UBERON:0001558,9.17e-09,15;UBERON:0004765,1.05e-08,90;UBERON:0002405,2.27e-08,93;UBERON:0002390,7.40e-08,98;UBERON:0003061,7.40e-08,98;UBERON:0001434,1.15e-07,100;UBERON:0002185,2.76e-07,5;UBERON:0002193,5.69e-07,108 | |||
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| ||
|short_description=p@chr1:209826575..209826599,+ | |short_description=p@chr1:209826575..209826599,+ | ||
}} | }} |
Latest revision as of 03:21, 28 July 2015
Short description: | p@chr1:209826575..209826599, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:209826575..209826599, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.43e-11 | 3 |
epithelium of bronchus | 1.43e-11 | 3 |
bone marrow | 1.28e-10 | 76 |
bone element | 1.01e-09 | 82 |
tracheobronchial tree | 9.17e-09 | 15 |
lower respiratory tract | 9.17e-09 | 15 |
skeletal element | 1.05e-08 | 90 |
immune system | 2.27e-08 | 93 |
hematopoietic system | 7.40e-08 | 98 |
blood island | 7.40e-08 | 98 |
skeletal system | 1.15e-07 | 100 |
bronchus | 2.76e-07 | 5 |
hemolymphoid system | 5.69e-07 | 108 |