FFCP PHASE1:Hg19::chr2:177001098..177001101,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3232 | |EntrezGene=3232 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5137 | |HGNC=5137 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-238bp_to_ENST00000459979,uc002ukr.2_5end | |||
|cluster_id=chr2:177001098..177001101,+ | |||
|description=CAGE_peak_9_at_HOXD3_5end | |||
|id=chr2:177001098..177001101,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000346;7.01e-25;3!CL:1000428;7.01e-25;3!CL:0002559;2.33e-15;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,4.31e-25,3;CL:1000428,4.31e-25,3;CL:0002559,1.75e-15,5 | |||
|ontology_enrichment_development_v019=UBERON:0006241;7.01e-25;3!UBERON:0003057;7.01e-25;3!UBERON:0005754;9.81e-20;1!UBERON:0007297;1.50e-10;2!UBERON:0003918;3.08e-08;10!UBERON:0007687;3.08e-08;10 | |||
|ontology_enrichment_disease=DOID:171!2.27e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!4.83e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;3.58e-25;3!UBERON:0004054;3.58e-25;3!UBERON:0002240;7.01e-25;3!UBERON:0005174;7.01e-25;3!UBERON:0000412;7.01e-25;3!UBERON:0001992;7.01e-25;3!UBERON:0001137;7.01e-25;3!UBERON:0000998;9.81e-20;1!UBERON:0006868;9.81e-20;1!UBERON:0005795;2.71e-19;1!UBERON:0001000;2.71e-19;1!UBERON:0007195;2.71e-19;1!UBERON:0005352;2.71e-19;1!UBERON:0005904;3.74e-19;4!UBERON:0002073;2.33e-15;5!UBERON:0002067;5.86e-09;9!UBERON:0000058;3.08e-08;10!UBERON:0003135;1.44e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,2.64e-25,3;UBERON:0004054,2.64e-25,3;UBERON:0000412,4.31e-25,3;UBERON:0001992,4.31e-25,3;UBERON:0002240,7.93e-25,3;UBERON:0005174,7.93e-25,3;UBERON:0001137,7.93e-25,3;UBERON:0000998,8.95e-20,1;UBERON:0006868,8.95e-20,1;UBERON:0001000,1.88e-19,1;UBERON:0005352,1.88e-19,1;UBERON:0005904,2.98e-19,4;UBERON:0007195,5.62e-19,1;UBERON:0002073,1.75e-15,5;UBERON:0005086,1.75e-15,5;UBERON:0000489,1.20e-09,31;UBERON:0002067,5.00e-09,9;UBERON:0004016,5.00e-09,9;UBERON:0010083,5.00e-09,9;UBERON:0003135,1.33e-07,11 | |||
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| ||
|short_description=p9@HOXD3 | |||
}} | }} |
Latest revision as of 09:15, 18 September 2015
Short description: | p9@HOXD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_HOXD3_5end |
Coexpression cluster: | NA |
Association with transcript: | -238bp_to_ENST00000459979, uc002ukr.2_5end |
EntrezGene: | HOXD3 |
HGNC: | 5137 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 4.31e-25 | 3 |
stem cell of epidermis | 4.31e-25 | 3 |
hair follicle cell | 1.75e-15 | 5 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 2.64e-25 | 3 |
internal male genitalia | 2.64e-25 | 3 |
dermal papilla | 4.31e-25 | 3 |
papillary layer of dermis | 4.31e-25 | 3 |
spinal cord | 7.93e-25 | 3 |
dorsal region element | 7.93e-25 | 3 |
dorsum | 7.93e-25 | 3 |
seminal vesicle | 8.95e-20 | 1 |
seminal fluid secreting gland | 8.95e-20 | 1 |
vas deferens | 1.88e-19 | 1 |
spermatic cord | 1.88e-19 | 1 |
duct of male reproductive system | 2.98e-19 | 4 |
stroma of bone marrow | 5.62e-19 | 1 |
hair follicle | 1.75e-15 | 5 |
hair follicle placode | 1.75e-15 | 5 |
cavitated compound organ | 1.20e-09 | 31 |
dermis | 5.00e-09 | 9 |
dermatome | 5.00e-09 | 9 |
future dermis | 5.00e-09 | 9 |
male reproductive organ | 1.33e-07 | 11 |