FFCP PHASE1:Hg19::chr3:128779616..128779659,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2815 | |EntrezGene=2815 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4444 | |HGNC=4444 | ||
|TSSclassifier=strong | |||
|UniProt=P14770 | |UniProt=P14770 | ||
|association_with_transcript=0bp_to_NM_000174,uc003elm.2_5end | |association_with_transcript=0bp_to_NM_000174,uc003elm.2_5end | ||
|cluster_id=chr3:128779616..128779659,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_GP9_5end | |description=CAGE_peak_1_at_GP9_5end | ||
|id=chr3:128779616..128779659,+ | |id=chr3:128779616..128779659,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.93e-20!172;CL:0000566!1.93e-20!172;CL:0000988!6.72e-19!182;CL:0002032!1.57e-17!165;CL:0000837!1.57e-17!165;CL:0000738!1.15e-14!140;CL:0000094!5.48e-12!8;CL:0000763!1.20e-11!112;CL:0000049!1.20e-11!112;CL:0002087!1.30e-11!119;CL:0002031!7.91e-10!124;CL:0000766!2.50e-08!76;CL:0000081!4.10e-08!11;CL:0000236!5.04e-08!14 | |ontology_enrichment_celltype=CL:0000037!1.93e-20!172;CL:0000566!1.93e-20!172;CL:0000988!6.72e-19!182;CL:0002032!1.57e-17!165;CL:0000837!1.57e-17!165;CL:0000738!1.15e-14!140;CL:0000094!5.48e-12!8;CL:0000763!1.20e-11!112;CL:0000049!1.20e-11!112;CL:0002087!1.30e-11!119;CL:0002031!7.91e-10!124;CL:0000766!2.50e-08!76;CL:0000081!4.10e-08!11;CL:0000236!5.04e-08!14 | ||
|ontology_enrichment_celltype_v019=CL:0000094;1.82e-26;8!CL:0000081;7.45e-19;11!CL:0000775;4.13e-11;3!CL:0000226;5.23e-11;3!CL:0000842;5.23e-11;3!CL:0000767;6.50e-11;3!CL:0000236;3.58e-08;13!CL:0000771;6.95e-08;2!CL:0000764;1.08e-07;2!CL:0000558;1.08e-07;2!CL:0002262;5.15e-07;2!CL:1000398;5.15e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,1.79e-26,8;CL:0000081,7.37e-19,11;CL:0000037,6.79e-16,168;CL:0000988,1.20e-14,177;CL:0002032,2.52e-12,161;CL:0000837,2.52e-12,161;CL:0000775,3.99e-11,3;CL:0000763,4.18e-11,108;CL:0000049,4.18e-11,108;CL:0000226,5.06e-11,3;CL:0000842,5.06e-11,3;CL:0000767,6.62e-11,3;CL:0000771,6.95e-08,2;CL:0000764,1.08e-07,2;CL:0000765,1.08e-07,2;CL:0000050,1.08e-07,2;CL:0000038,1.08e-07,2;CL:0000558,1.08e-07,2;CL:0000547,1.08e-07,2;CL:0000549,1.08e-07,2;CL:0000550,1.08e-07,2;CL:0000552,1.08e-07,2;CL:0000738,1.22e-07,136;CL:0000236,1.57e-07,14;CL:0002262,4.00e-07,2;CL:1000398,4.00e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:8692,7.05e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.22e-20!115;UBERON:0000178!1.19e-13!15;UBERON:0000179!1.19e-13!15;UBERON:0000463!1.19e-13!15;UBERON:0002390!1.54e-09!102;UBERON:0003061!1.54e-09!102;UBERON:0002193!9.57e-08!112 | |ontology_enrichment_uberon=UBERON:0007023!2.22e-20!115;UBERON:0000178!1.19e-13!15;UBERON:0000179!1.19e-13!15;UBERON:0000463!1.19e-13!15;UBERON:0002390!1.54e-09!102;UBERON:0003061!1.54e-09!102;UBERON:0002193!9.57e-08!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.31e-32;15!UBERON:0000179;2.31e-32;15!UBERON:0000463;2.31e-32;15!UBERON:0002390;1.92e-20;32!UBERON:0002193;1.12e-10;42!UBERON:0001281;5.15e-07;2!UBERON:0003497;5.15e-07;2!UBERON:0003909;5.15e-07;2!UBERON:0003835;5.15e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.25e-32,15;UBERON:0000179,2.25e-32,15;UBERON:0000463,2.25e-32,15;UBERON:0002390,8.71e-09,98;UBERON:0003061,8.71e-09,98;UBERON:0002193,1.48e-07,108;UBERON:0001281,4.00e-07,2;UBERON:0003497,4.00e-07,2;UBERON:0003909,4.00e-07,2;UBERON:0003835,4.00e-07,2 | |||
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| ||
|short_description=p1@GP9 | |short_description=p1@GP9 | ||
}} | }} |
Latest revision as of 08:30, 20 September 2015
Short description: | p1@GP9 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GP9_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_NM_000174, uc003elm.2_5end |
EntrezGene: | GP9 |
HGNC: | 4444 |
UniProt: | P14770 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 1.79e-26 | 8 |
blood cell | 7.37e-19 | 11 |
hematopoietic stem cell | 6.79e-16 | 168 |
hematopoietic cell | 1.20e-14 | 177 |
hematopoietic oligopotent progenitor cell | 2.52e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.52e-12 | 161 |
neutrophil | 3.99e-11 | 3 |
myeloid cell | 4.18e-11 | 108 |
common myeloid progenitor | 4.18e-11 | 108 |
single nucleate cell | 5.06e-11 | 3 |
mononuclear cell | 5.06e-11 | 3 |
basophil | 6.62e-11 | 3 |
eosinophil | 6.95e-08 | 2 |
erythroid lineage cell | 1.08e-07 | 2 |
erythroblast | 1.08e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 1.08e-07 | 2 |
erythroid progenitor cell | 1.08e-07 | 2 |
reticulocyte | 1.08e-07 | 2 |
proerythroblast | 1.08e-07 | 2 |
basophilic erythroblast | 1.08e-07 | 2 |
polychromatophilic erythroblast | 1.08e-07 | 2 |
orthochromatic erythroblast | 1.08e-07 | 2 |
leukocyte | 1.22e-07 | 136 |
B cell | 1.57e-07 | 14 |
endothelial cell of sinusoid | 4.00e-07 | 2 |
endothelial cell of hepatic sinusoid | 4.00e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.25e-32 | 15 |
haemolymphatic fluid | 2.25e-32 | 15 |
organism substance | 2.25e-32 | 15 |
hematopoietic system | 8.71e-09 | 98 |
blood island | 8.71e-09 | 98 |
hemolymphoid system | 1.48e-07 | 108 |
hepatic sinusoid | 4.00e-07 | 2 |
abdomen blood vessel | 4.00e-07 | 2 |
sinusoid | 4.00e-07 | 2 |
abdominal segment blood vessel | 4.00e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 7.05e-07 | 31 |