FFCP PHASE1:Hg19::chr4:776378..776392,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_at_chr4:776378..776392,+ | |||
|id=chr4:776378..776392,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000632;1.71e-14;3!CL:0002327;2.53e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,1.83e-14,3;CL:0002327,2.53e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;6.62e-41;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;2.01e-40;4!DOID:1612;2.01e-40;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.48e-40,4;DOID:1612,1.48e-40,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.80e-15!115;UBERON:0006947!3.75e-09!3;UBERON:0004054!3.75e-09!3;UBERON:0003101!2.05e-08!22;UBERON:0000079!2.05e-08!22;UBERON:0006331!2.32e-08!3;UBERON:0000988!3.77e-08!3;UBERON:0005156!1.09e-07!59;UBERON:0000990!1.09e-07!59;UBERON:0002298!1.67e-07!8;UBERON:0004175!3.64e-07!25;UBERON:0005904!6.12e-07!4;UBERON:0003124!8.19e-07!7;UBERON:0005631!9.66e-07!14;UBERON:0000158!9.66e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001000;1.81e-40;1!UBERON:0005352;1.81e-40;1!UBERON:0000310;6.65e-17;10!UBERON:0001443;1.81e-15;11!UBERON:0006947;1.71e-14;3!UBERON:0004054;1.71e-14;3!UBERON:0002365;1.03e-12;31!UBERON:0002330;1.03e-12;31!UBERON:0001911;2.53e-11;4!UBERON:0005904;3.26e-11;4!UBERON:0002107;2.36e-09;19!UBERON:0006925;2.36e-09;19!UBERON:0002423;2.43e-07;25!UBERON:0002530;4.70e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,1.48e-40,1;UBERON:0005352,1.48e-40,1;UBERON:0000310,5.90e-17,10;UBERON:0001443,1.62e-15,11;UBERON:0006947,1.60e-14,3;UBERON:0004054,1.60e-14,3;UBERON:0002365,2.68e-12,31;UBERON:0002330,2.68e-12,31;UBERON:0001911,2.53e-11,4;UBERON:0005333,2.53e-11,4;UBERON:0008425,2.53e-11,4;UBERON:0005311,2.53e-11,4;UBERON:0005904,3.10e-11,4;UBERON:0002107,2.56e-09,19;UBERON:0006925,2.56e-09,19;UBERON:0008836,2.56e-09,19;UBERON:0008835,3.51e-08,22;UBERON:0003894,3.51e-08,22;UBERON:0009854,7.23e-08,23;UBERON:0007499,2.58e-07,25;UBERON:0009497,2.58e-07,25;UBERON:0000015,2.58e-07,25;UBERON:0002423,2.58e-07,25;UBERON:0006235,2.58e-07,25;UBERON:0004161,2.58e-07,25;UBERON:0009856,4.55e-07,26;UBERON:0002530,8.00e-07,59 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,1.26755034821831,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.222886768554957,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,5.24759999977174,0,0,0.508507300585533,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.153900517007594,0,0.23056390438806,0.269272933229316,0.869178975376065,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,1.57833761139756,0,0,0.126373159256976,0,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323474434190045,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0.0679697329768317,0.0657727735628491,0,0.111231401892069,0.78493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0.917458566809082,0.143339583151451,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0.643264296743914,0,0,0.267964130156178,0,0.103432995861895,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p@chr4:776378..776392,+ | |||
}} |
Revision as of 23:44, 21 January 2014
Short description: | p@chr4:776378..776392, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:776378..776392, + |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 1.83e-14 | 3 |
mammary gland epithelial cell | 2.53e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
vas deferens | 1.48e-40 | 1 |
spermatic cord | 1.48e-40 | 1 |
breast | 5.90e-17 | 10 |
chest | 1.62e-15 | 11 |
male genital duct | 1.60e-14 | 3 |
internal male genitalia | 1.60e-14 | 3 |
exocrine gland | 2.68e-12 | 31 |
exocrine system | 2.68e-12 | 31 |
mammary gland | 2.53e-11 | 4 |
mammary bud | 2.53e-11 | 4 |
mammary ridge | 2.53e-11 | 4 |
mammary placode | 2.53e-11 | 4 |
duct of male reproductive system | 3.10e-11 | 4 |
liver | 2.56e-09 | 19 |
digestive gland | 2.56e-09 | 19 |
liver bud | 2.56e-09 | 19 |
hepatic diverticulum | 3.51e-08 | 22 |
liver primordium | 3.51e-08 | 22 |
digestive tract diverticulum | 7.23e-08 | 23 |
epithelial sac | 2.58e-07 | 25 |
epithelium of foregut-midgut junction | 2.58e-07 | 25 |
anatomical boundary | 2.58e-07 | 25 |
hepatobiliary system | 2.58e-07 | 25 |
foregut-midgut junction | 2.58e-07 | 25 |
septum transversum | 2.58e-07 | 25 |
sac | 4.55e-07 | 26 |
gland | 8.00e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.48e-40 | 4 |
breast cancer | 1.48e-40 | 4 |