FFCP PHASE1:Hg19::chr6:113975710..113975747,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:113975710..113975747,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr6:113975710..113975747,- | |description=CAGE_peak_at_chr6:113975710..113975747,- | ||
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|ontology_enrichment_celltype=CL:0002009!6.16e-20!65;CL:0002057!7.77e-20!42;CL:0002194!3.26e-18!63;CL:0000576!3.26e-18!63;CL:0000040!3.26e-18!63;CL:0000559!3.26e-18!63;CL:0000557!3.29e-18!71;CL:0000860!7.77e-18!45;CL:0000766!4.37e-17!76;CL:0000839!3.51e-16!70;CL:0000763!1.68e-11!112;CL:0000049!1.68e-11!112;CL:0002076!1.44e-09!43;CL:0000223!7.18e-09!59;CL:0000738!2.39e-08!140;CL:0000453!1.67e-07!5;CL:0000244!8.34e-07!4;CL:0000731!8.34e-07!4 | |ontology_enrichment_celltype=CL:0002009!6.16e-20!65;CL:0002057!7.77e-20!42;CL:0002194!3.26e-18!63;CL:0000576!3.26e-18!63;CL:0000040!3.26e-18!63;CL:0000559!3.26e-18!63;CL:0000557!3.29e-18!71;CL:0000860!7.77e-18!45;CL:0000766!4.37e-17!76;CL:0000839!3.51e-16!70;CL:0000763!1.68e-11!112;CL:0000049!1.68e-11!112;CL:0002076!1.44e-09!43;CL:0000223!7.18e-09!59;CL:0000738!2.39e-08!140;CL:0000453!1.67e-07!5;CL:0000244!8.34e-07!4;CL:0000731!8.34e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.14e-27;33!CL:0002057;5.14e-27;33!CL:0000473;1.00e-22;39!CL:0000234;1.00e-22;39!CL:0000576;2.36e-16;48!CL:0000244;6.86e-16;4!CL:0000731;6.86e-16;4!CL:0000766;3.19e-12;69!CL:0000453;6.25e-12;5!CL:0000317;6.50e-08;2!CL:1000448;6.50e-08;2!CL:0002308;6.50e-08;2!CL:0002140;6.50e-08;2!CL:0002087;1.73e-07;104 | |ontology_enrichment_celltype_v019=CL:0000860;5.14e-27;33!CL:0002057;5.14e-27;33!CL:0000473;1.00e-22;39!CL:0000234;1.00e-22;39!CL:0000576;2.36e-16;48!CL:0000244;6.86e-16;4!CL:0000731;6.86e-16;4!CL:0000766;3.19e-12;69!CL:0000453;6.25e-12;5!CL:0000317;6.50e-08;2!CL:1000448;6.50e-08;2!CL:0002308;6.50e-08;2!CL:0002140;6.50e-08;2!CL:0002087;1.73e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.38e-33,48;CL:0000234,3.38e-33,48;CL:0000860,6.72e-32,42;CL:0002057,6.72e-32,42;CL:0002009,2.20e-29,61;CL:0002194,6.07e-28,59;CL:0000576,6.07e-28,59;CL:0000040,6.07e-28,59;CL:0000559,6.07e-28,59;CL:0000557,3.04e-26,67;CL:0000839,2.12e-24,66;CL:0000766,6.57e-22,72;CL:0000763,1.29e-18,108;CL:0000049,1.29e-18,108;CL:0000738,6.15e-16,136;CL:0000244,6.26e-16,4;CL:0000731,6.26e-16,4;CL:0002087,3.81e-14,115;CL:0002031,2.42e-13,120;CL:0000453,5.50e-12,5;CL:0000037,1.36e-11,168;CL:0002032,2.25e-11,161;CL:0000837,2.25e-11,161;CL:0000988,1.16e-10,177;CL:0000317,8.37e-08,2;CL:1000448,8.37e-08,2;CL:0002308,8.37e-08,2;CL:0002140,8.37e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;8.21e-22;42 | |ontology_enrichment_development_v019=CL:0002057;8.21e-22;42 | ||
|ontology_enrichment_disease=DOID:1749!3.50e-09!14 | |ontology_enrichment_disease=DOID:1749!3.50e-09!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.16e-15!80;UBERON:0001474!1.78e-15!86;UBERON:0004765!1.01e-13!101;UBERON:0001434!1.01e-13!101;UBERON:0002390!4.25e-13!102;UBERON:0003061!4.25e-13!102;UBERON:0002405!4.80e-13!115;UBERON:0002193!4.32e-12!112;UBERON:0000365!6.16e-08!5 | |ontology_enrichment_uberon=UBERON:0002371!1.16e-15!80;UBERON:0001474!1.78e-15!86;UBERON:0004765!1.01e-13!101;UBERON:0001434!1.01e-13!101;UBERON:0002390!4.25e-13!102;UBERON:0003061!4.25e-13!102;UBERON:0002405!4.80e-13!115;UBERON:0002193!4.32e-12!112;UBERON:0000365!6.16e-08!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;5.63e-19;5!UBERON:0005910;9.12e-16;6!UBERON:0002419;6.50e-08;2!UBERON:0007771;6.50e-08;2!UBERON:0003297;6.50e-08;2!UBERON:0001821;6.50e-08;2!UBERON:0003487;6.50e-08;2!UBERON:0001820;6.50e-08;2!UBERON:0000486;1.02e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0000365;5.63e-19;5!UBERON:0005910;9.12e-16;6!UBERON:0002419;6.50e-08;2!UBERON:0007771;6.50e-08;2!UBERON:0003297;6.50e-08;2!UBERON:0001821;6.50e-08;2!UBERON:0003487;6.50e-08;2!UBERON:0001820;6.50e-08;2!UBERON:0000486;1.02e-07;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.88e-22,76;UBERON:0001474,2.18e-20,82;UBERON:0004765,7.31e-20,90;UBERON:0000365,5.14e-19,5;UBERON:0002390,1.24e-17,98;UBERON:0003061,1.24e-17,98;UBERON:0002405,2.72e-17,93;UBERON:0001434,2.85e-17,100;UBERON:0005910,8.47e-16,6;UBERON:0002193,1.92e-15,108;UBERON:0002204,5.38e-08,167;UBERON:0002419,8.37e-08,2;UBERON:0007771,8.37e-08,2;UBERON:0003297,8.37e-08,2;UBERON:0001821,8.37e-08,2;UBERON:0003487,8.37e-08,2;UBERON:0001820,8.37e-08,2;UBERON:0005089,8.37e-08,2;UBERON:0005088,8.37e-08,2 | |||
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|short_description=p@chr6:113975710..113975747,- | |short_description=p@chr6:113975710..113975747,- | ||
}} | }} |
Latest revision as of 18:31, 30 July 2015
Short description: | p@chr6:113975710..113975747, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:113975710..113975747, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.38e-33 | 48 |
phagocyte | 3.38e-33 | 48 |
classical monocyte | 6.72e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.72e-32 | 42 |
macrophage dendritic cell progenitor | 2.20e-29 | 61 |
monopoietic cell | 6.07e-28 | 59 |
monocyte | 6.07e-28 | 59 |
monoblast | 6.07e-28 | 59 |
promonocyte | 6.07e-28 | 59 |
granulocyte monocyte progenitor cell | 3.04e-26 | 67 |
myeloid lineage restricted progenitor cell | 2.12e-24 | 66 |
myeloid leukocyte | 6.57e-22 | 72 |
myeloid cell | 1.29e-18 | 108 |
common myeloid progenitor | 1.29e-18 | 108 |
leukocyte | 6.15e-16 | 136 |
transitional epithelial cell | 6.26e-16 | 4 |
urothelial cell | 6.26e-16 | 4 |
nongranular leukocyte | 3.81e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 2.42e-13 | 120 |
Langerhans cell | 5.50e-12 | 5 |
hematopoietic stem cell | 1.36e-11 | 168 |
hematopoietic oligopotent progenitor cell | 2.25e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.25e-11 | 161 |
hematopoietic cell | 1.16e-10 | 177 |
sebum secreting cell | 8.37e-08 | 2 |
epithelial cell of sweat gland | 8.37e-08 | 2 |
epithelial cell of skin gland | 8.37e-08 | 2 |
acinar cell of sebaceous gland | 8.37e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.88e-22 | 76 |
bone element | 2.18e-20 | 82 |
skeletal element | 7.31e-20 | 90 |
urothelium | 5.14e-19 | 5 |
hematopoietic system | 1.24e-17 | 98 |
blood island | 1.24e-17 | 98 |
immune system | 2.72e-17 | 93 |
skeletal system | 2.85e-17 | 100 |
transitional epithelium | 8.47e-16 | 6 |
hemolymphoid system | 1.92e-15 | 108 |
musculoskeletal system | 5.38e-08 | 167 |
skin gland | 8.37e-08 | 2 |
epidermis gland | 8.37e-08 | 2 |
gland of integumental system | 8.37e-08 | 2 |
sebaceous gland | 8.37e-08 | 2 |
skin sebaceous gland | 8.37e-08 | 2 |
sweat gland | 8.37e-08 | 2 |
sweat gland placode | 8.37e-08 | 2 |
sebaceous gland placode | 8.37e-08 | 2 |