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CL:0002320

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Name:connective tissue cell
Namespace:FANTOM
Definition:"A cell of the supporting or framework tissue of the body, arising chiefly from the embryonic mesoderm and including adipose tissue, cartilage, and bone." [GOC:tfm, ISBN:0618947256]
Xrefs:
links:
FMA:63875
Alt_id: CL:1000406
Created by:tmeehan
Creation date:2010-09-15T03:01:54Z


Ontology association

Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.



link to ontology dataset


data

Parents

is_a:CL:0000548(animal cell),CL:0002371(somatic cell)
part_of:UBERON:0002384(connective tissue)



Children


is a:CL:0000057 (fibroblast),CL:0000058 (chondroblast),CL:0000062 (osteoblast),CL:0000134 (mesenchymal cell),CL:0000136 (fat cell),CL:0000137 (osteocyte),CL:0000499 (stromal cell),CL:0000669 (pericyte cell),CL:0002503 (adventitial cell),CL:0002564 (nucleus pulposus cell of intervertebral disc),CL:0002576 (perineural cell),CL:0002602 (annulus pulposus cell),CL:1000500 (kidney interstitial cell)

Ontology Tree: Loaded from BioPortal


FF samples

It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens) Mouse (Mus musculus)



Enrichment analysis: top 100 FFCP enriched with this ontology term
TOP 100 FANTOM5 Cage Peaks enriched with CL:0002320 (connective tissue cell), sorted by p-values
Analyst: Hideya Kawaji



link to source dataset
human : data

mouse : data

P-valueFFCPShort description
4.98e-45FFCP PHASE1:Hg19::chr2:74781828..74781898,+#_d180ece84562a6944ea84ff7a55490a8p1@DOK1
4.98e-45FFCP PHASE2:Hg19::chr2:74781828..74781898,+#_d180ece84562a6944ea84ff7a55490a8p1@DOK1
5.83e-45FFCP PHASE1:Hg19::chr19:48828606..48828637,+#_dfa50698fc59d10a2c0a99314f03535dp2@EMP3
5.83e-45FFCP PHASE2:Hg19::chr19:48828606..48828637,+#_dfa50698fc59d10a2c0a99314f03535dp2@EMP3
1.32e-44FFCP PHASE2:Hg19::chr18:18691563..18691610,-#_0556be6ad3149191480df5be5418f65fp4@ROCK1
1.32e-44FFCP PHASE1:Hg19::chr18:18691563..18691610,-#_0556be6ad3149191480df5be5418f65fp4@ROCK1
1.65e-44FFCP PHASE1:Hg19::chr2:182322231..182322262,+#_7d5bc7215d4a38c829b9c33220a49f0ep2@ITGA4
1.65e-44FFCP PHASE2:Hg19::chr2:182322231..182322262,+#_7d5bc7215d4a38c829b9c33220a49f0ep2@ITGA4
3.0e-40FFCP PHASE1:Hg19::chr6:31704075..31704106,-#_417b2bc6f78e991547c9d3b0f33839a4p2@CLIC1
3.0e-40FFCP PHASE2:Hg19::chr6:31704075..31704106,-#_417b2bc6f78e991547c9d3b0f33839a4p2@CLIC1
8.81e-40FFCP PHASE2:Hg19::chr5:78281092..78281154,-#_ebe7e874fc30c97e3297531832f52778p1@ARSB
8.81e-40FFCP PHASE1:Hg19::chr5:78281092..78281154,-#_ebe7e874fc30c97e3297531832f52778p1@ARSB
2.65e-39FFCP PHASE1:Hg19::chr16:50300440..50300485,+#_068d8321549efaa677b03ef44e2941bdp1@ADCY7
2.65e-39FFCP PHASE2:Hg19::chr16:50300440..50300485,+#_068d8321549efaa677b03ef44e2941bdp1@ADCY7
1.03e-37FFCP PHASE2:Hg19::chr1:153518270..153518290,-#_aabfa8030a94fab686f7625186806344p1@S100A4
1.03e-37FFCP PHASE1:Hg19::chr1:153518270..153518290,-#_aabfa8030a94fab686f7625186806344p1@S100A4
2.57e-37FFCP PHASE1:Hg19::chr15:73076030..73076121,-#_157190ee3f86b82280b26097dd4548eap1@ADPGK
2.57e-37FFCP PHASE2:Hg19::chr15:73076030..73076121,-#_157190ee3f86b82280b26097dd4548eap1@ADPGK
2.86e-36FFCP PHASE2:Mm9::chr7:26474167..26474188,-#_9ace93615f340db719e33dd2bebd294ap@chr7:26474167..26474188, -
2.86e-36FFCP PHASE1:Mm9::chr7:26474167..26474188,-#_9ace93615f340db719e33dd2bebd294ap@chr7:26474167..26474188, -
3.34e-36FFCP PHASE2:Hg19::chr19:48828647..48828658,+#_823809d3d6c521bbcd11d3f0e7bc28e9p3@EMP3
3.34e-36FFCP PHASE1:Hg19::chr19:48828647..48828658,+#_823809d3d6c521bbcd11d3f0e7bc28e9p3@EMP3
6.92e-36FFCP PHASE1:Hg19::chr2:182322070..182322155,+#_f5579569789e8e17bfcd60a6f19dfb12p1@ITGA4
6.92e-36FFCP PHASE2:Hg19::chr2:182322070..182322155,+#_f5579569789e8e17bfcd60a6f19dfb12p1@ITGA4
8.31e-36FFCP PHASE2:Hg19::chr12:44152740..44152815,+#_bee9d87187bb48502e68ba04e76ce22bp1@IRAK4
8.31e-36FFCP PHASE1:Hg19::chr12:44152740..44152815,+#_bee9d87187bb48502e68ba04e76ce22bp1@IRAK4
3.07e-35FFCP PHASE1:Hg19::chrX:117629766..117629846,+#_67b5a29735225a412f60dc3adefc7d03p1@DOCK11
3.07e-35FFCP PHASE2:Hg19::chrX:117629766..117629846,+#_67b5a29735225a412f60dc3adefc7d03p1@DOCK11
4.38e-35FFCP PHASE2:Hg19::chr1:145096480..145096513,+#_c11fc27590737592d4bdcab091dd5c8ap2@SEC22B
4.38e-35FFCP PHASE1:Hg19::chr1:145096480..145096513,+#_c11fc27590737592d4bdcab091dd5c8ap2@SEC22B
5.5e-35FFCP PHASE1:Hg19::chr2:197036289..197036314,-#_638c1580a4c60c057df76493225696bep1@STK17B
5.5e-35FFCP PHASE2:Hg19::chr2:197036289..197036314,-#_638c1580a4c60c057df76493225696bep1@STK17B
5.64e-35FFCP PHASE2:Hg19::chr13:41635029..41635044,-#_28635ae7b5eda3c6112ff3fbb4c9ad75p4@ELF1
5.64e-35FFCP PHASE1:Hg19::chr13:41635029..41635044,-#_28635ae7b5eda3c6112ff3fbb4c9ad75p4@ELF1
5.89e-35FFCP PHASE1:Hg19::chr12:123920991..123921047,-#_356896fb2ed7175405d03060c2d5e87ep1@RILPL2
5.89e-35FFCP PHASE2:Hg19::chr12:123920991..123921047,-#_356896fb2ed7175405d03060c2d5e87ep1@RILPL2
6.88e-35FFCP PHASE1:Hg19::chr2:114647617..114647739,+#_1b43a18bc0b079dcc34b829caf49365cp1@ACTR3
6.88e-35FFCP PHASE2:Hg19::chr2:114647617..114647739,+#_1b43a18bc0b079dcc34b829caf49365cp1@ACTR3
1.15e-33FFCP PHASE1:Hg19::chr3:50378235..50378286,-#_fa6395ba7aca545fa0e09d6d109e70cdp2@RASSF1
1.15e-33FFCP PHASE2:Hg19::chr3:50378235..50378286,-#_fa6395ba7aca545fa0e09d6d109e70cdp2@RASSF1
2.75e-33FFCP PHASE2:Hg19::chr2:197036269..197036287,-#_f22af9c8e49e284870364e80a9886532p2@STK17B
2.75e-33FFCP PHASE1:Hg19::chr2:197036269..197036287,-#_f22af9c8e49e284870364e80a9886532p2@STK17B
4.06e-33FFCP PHASE1:Hg19::chr10:26727647..26727722,+#_029aae2e9774901262f137b4c088d8dap2@APBB1IP
4.06e-33FFCP PHASE2:Hg19::chr10:26727647..26727722,+#_029aae2e9774901262f137b4c088d8dap2@APBB1IP
5.24e-33FFCP PHASE1:Mm9::chr4:140255879..140255890,+#_1915b80e409e6178f3baedacb872ce36p@chr4:140255879..140255890, +
5.24e-33FFCP PHASE2:Mm9::chr4:140255879..140255890,+#_1915b80e409e6178f3baedacb872ce36p@chr4:140255879..140255890, +
5.55e-33FFCP PHASE1:Hg19::chr3:5229382..5229408,+#_b9b26edd932897ff0d76a1aa3569b780p1@EDEM1
5.55e-33FFCP PHASE2:Hg19::chr3:5229382..5229408,+#_b9b26edd932897ff0d76a1aa3569b780p1@EDEM1
7.3e-33FFCP PHASE2:Hg19::chr17:56415424..56415454,-#_5ef0b6d471f8ddca3d60f14f5ce19bf5p@chr17:56415424..56415454, -
7.3e-33FFCP PHASE1:Hg19::chr17:56415424..56415454,-#_5ef0b6d471f8ddca3d60f14f5ce19bf5p@chr17:56415424..56415454, -
8.6e-33FFCP PHASE1:Hg19::chr10:18948026..18948051,-#_85450f92223e7bc8252ce2965d78ac83p1@BC033534
8.6e-33FFCP PHASE2:Hg19::chr10:18948026..18948051,-#_85450f92223e7bc8252ce2965d78ac83p1@BC033534
1.5e-32FFCP PHASE1:Hg19::chr2:68592394..68592405,+#_e99f464f29b6e8b78365b9f947441b64p2@PLEK
1.5e-32FFCP PHASE2:Hg19::chr2:68592394..68592405,+#_e99f464f29b6e8b78365b9f947441b64p2@PLEK
2.85e-32FFCP PHASE2:Hg19::chr13:41593405..41593416,-#_565e7f9c3739fe188246b01fb7e081dap9@ELF1
2.85e-32FFCP PHASE1:Hg19::chr13:41593405..41593416,-#_565e7f9c3739fe188246b01fb7e081dap9@ELF1
3.28e-32FFCP PHASE1:Hg19::chr19:48828539..48828550,+#_08153ff66a6938289aa7e829332c2ecap4@EMP3
3.28e-32FFCP PHASE2:Hg19::chr19:48828539..48828550,+#_08153ff66a6938289aa7e829332c2ecap4@EMP3
1.22e-31FFCP PHASE1:Hg19::chr8:121824235..121824275,-#_f3be4b792418d436301191e9ef429b2ap1@SNTB1
1.22e-31FFCP PHASE2:Hg19::chr8:121824235..121824275,-#_f3be4b792418d436301191e9ef429b2ap1@SNTB1
1.62e-31FFCP PHASE2:Hg19::chr14:95982953..95982999,-#_6ac998845fcfc18149ae09a7ed5158cfp@chr14:95982953..95982999, -
1.62e-31FFCP PHASE1:Hg19::chr14:95982953..95982999,-#_6ac998845fcfc18149ae09a7ed5158cfp@chr14:95982953..95982999, -
1.76e-31FFCP PHASE1:Mm9::chr1:175560978..175561013,+#_2e59e511b86082281b717a4068a266ecp1@Pyhin1
1.76e-31FFCP PHASE2:Mm9::chr1:175560978..175561013,+#_2e59e511b86082281b717a4068a266ecp1@Pyhin1
1.95e-31FFCP PHASE1:Hg19::chrX:19905661..19905699,-#_752e758889753db382d8ead5199873dbp1@SH3KBP1
1.95e-31FFCP PHASE2:Hg19::chrX:19905661..19905699,-#_752e758889753db382d8ead5199873dbp1@SH3KBP1
2.0e-31FFCP PHASE1:Hg19::chr17:16319083..16319126,+#_028ee23519eafff9eb9296d0c9516505p2@TRPV2
2.0e-31FFCP PHASE2:Hg19::chr17:16319083..16319126,+#_028ee23519eafff9eb9296d0c9516505p2@TRPV2
3.22e-31FFCP PHASE2:Hg19::chr2:192542577..192542595,-#_80cf323e4fa4b463d7331e52d4bcd9c2p@chr2:192542577..192542595, -
3.22e-31FFCP PHASE1:Hg19::chr2:192542577..192542595,-#_80cf323e4fa4b463d7331e52d4bcd9c2p@chr2:192542577..192542595, -
3.83e-31FFCP PHASE1:Hg19::chr3:15837528..15837578,-#_4f298c46b4752b144badc1bb3b290a6dp@chr3:15837528..15837578, -
3.83e-31FFCP PHASE2:Hg19::chr3:15837528..15837578,-#_4f298c46b4752b144badc1bb3b290a6dp@chr3:15837528..15837578, -
6.88e-31FFCP PHASE1:Mm9::chr3:60407657..60407673,+#_389b2bdd23f337446ddace8719e0c7abp@chr3:60407657..60407673, +
6.88e-31FFCP PHASE2:Mm9::chr3:60407657..60407673,+#_389b2bdd23f337446ddace8719e0c7abp@chr3:60407657..60407673, +
7.86e-31FFCP PHASE1:Hg19::chr4:80994619..80994633,-#_4107e149e6ae90de78c910f873ba6a91p6@ANTXR2
7.86e-31FFCP PHASE2:Hg19::chr4:80994619..80994633,-#_4107e149e6ae90de78c910f873ba6a91p6@ANTXR2
9.65e-31FFCP PHASE2:Hg19::chr17:16319065..16319082,+#_4728b8ad5765df518b4fea780f0a3f9ap4@TRPV2
9.65e-31FFCP PHASE1:Hg19::chr17:16319065..16319082,+#_4728b8ad5765df518b4fea780f0a3f9ap4@TRPV2
1.37e-30FFCP PHASE1:Hg19::chr13:100153737..100153785,+#_e2020f72f8aeb59b37742f4d5bba6540p1@TM9SF2
1.37e-30FFCP PHASE2:Hg19::chr13:100153737..100153785,+#_e2020f72f8aeb59b37742f4d5bba6540p1@TM9SF2
1.4e-30FFCP PHASE2:Hg19::chr2:182322344..182322359,+#_cfa8280796254533ce5ccdd22bcafa4ep6@ITGA4
1.4e-30FFCP PHASE1:Hg19::chr2:182322344..182322359,+#_cfa8280796254533ce5ccdd22bcafa4ep6@ITGA4
1.69e-30FFCP PHASE1:Hg19::chr10:70847852..70847873,+#_551bf7e09a4a8321c1cc574b7616f58dp1@SRGN
1.69e-30FFCP PHASE2:Hg19::chr10:70847852..70847873,+#_551bf7e09a4a8321c1cc574b7616f58dp1@SRGN
1.94e-30FFCP PHASE2:Hg19::chr10:98480301..98480315,-#_eae70a7b4c9eca52300a65914eceeaaep3@PIK3AP1
1.94e-30FFCP PHASE1:Hg19::chr10:98480301..98480315,-#_eae70a7b4c9eca52300a65914eceeaaep3@PIK3AP1
2.14e-30FFCP PHASE1:Hg19::chr20:61584026..61584096,+#_acaa61eb85e63cd3b9fa83d487ecbdd2p1@SLC17A9
2.14e-30FFCP PHASE2:Hg19::chr20:61584026..61584096,+#_acaa61eb85e63cd3b9fa83d487ecbdd2p1@SLC17A9
3.69e-30FFCP PHASE1:Hg19::chr5:42950949..42951013,+#_97718fc9bd96c0d9c4b2c78c814f94cep@chr5:42950949..42951013, +
3.69e-30FFCP PHASE2:Hg19::chr5:42950949..42951013,+#_97718fc9bd96c0d9c4b2c78c814f94cep@chr5:42950949..42951013, +
3.76e-30FFCP PHASE2:Hg19::chr11:67806467..67806527,+#_140f2639f37d867c0b17955335e586f0p1@TCIRG1
3.76e-30FFCP PHASE1:Hg19::chr11:67806467..67806527,+#_140f2639f37d867c0b17955335e586f0p1@TCIRG1
4.34e-30FFCP PHASE1:Hg19::chr13:41593392..41593403,-#_35baedcab2ccaffc743908f992dea909p7@ELF1
4.34e-30FFCP PHASE2:Hg19::chr13:41593392..41593403,-#_35baedcab2ccaffc743908f992dea909p7@ELF1
4.67e-30FFCP PHASE2:Mm9::chr17:84587077..84587097,-#_fd220c117169669040249a27195747eap4@Zfp36l2
4.67e-30FFCP PHASE1:Mm9::chr17:84587077..84587097,-#_fd220c117169669040249a27195747eap4@Zfp36l2
6.1e-30FFCP PHASE2:Hg19::chr18:3449527..3449582,+#_fafac4925bef45b79fab07d19537285ap6@TGIF1
6.1e-30FFCP PHASE1:Hg19::chr18:3449527..3449582,+#_fafac4925bef45b79fab07d19537285ap6@TGIF1
1.63e-29FFCP PHASE1:Hg19::chr5:169724839..169724855,-#_795251c2ade73ec6bd659204e8d083acp3@LCP2
1.63e-29FFCP PHASE2:Hg19::chr5:169724839..169724855,-#_795251c2ade73ec6bd659204e8d083acp3@LCP2