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CL:0002563

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Name:intestinal epithelial cell
Namespace:FANTOM
Definition:"An epithelial cell of the intestine." [GOC:tfm]
Created by:tmeehan
Creation date:2011-03-01T05:18:31Z


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0002251(epithelial cell of alimentary canal)
part_of:UBERON:0000160(intestine),UBERON:0001277(intestinal epithelium)



Children


is a:CL:0000510 (paneth cell),CL:0000584 (enterocyte),CL:0002250 (intestinal crypt stem cell),CL:0002253 (epithelial cell of large intestine),CL:0002254 (epithelial cell of small intestine),FF:10812-111B2 (normal intestinal epithelial cell line:FHs 74 Int)
derives from:FF:0000080 (human intestinal epithelial cell sample)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002563 (intestinal epithelial cell), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.55e-98FFCP PHASE2:Hg19::chr9:35801527..35801540,+#_c35a4a1d679d06f5c12f69d85cb10c04p@chr9:35801527..35801540, +
1.55e-98FFCP PHASE1:Hg19::chr9:35801527..35801540,+#_c35a4a1d679d06f5c12f69d85cb10c04p@chr9:35801527..35801540, +
4.97e-77FFCP PHASE1:Mm9::chr8:122335239..122335244,+#_d57631713a92003e5a6389d16c123e5ap@chr8:122335239..122335244, +
4.97e-77FFCP PHASE2:Mm9::chr8:122335239..122335244,+#_d57631713a92003e5a6389d16c123e5ap@chr8:122335239..122335244, +
1.86e-71FFCP PHASE2:Mm9::chr17:57201412..57201418,-#_59b7d83028f9c815e901000a187c277fp@chr17:57201412..57201418, -
1.86e-71FFCP PHASE1:Mm9::chr17:57201412..57201418,-#_59b7d83028f9c815e901000a187c277fp@chr17:57201412..57201418, -
1.41e-68FFCP PHASE1:Mm9::chr4:155434167..155434177,+#_66379793841825f8f723bf87bbb74b69p@chr4:155434167..155434177, +
1.41e-68FFCP PHASE2:Mm9::chr4:155434167..155434177,+#_66379793841825f8f723bf87bbb74b69p@chr4:155434167..155434177, +
1.7e-67FFCP PHASE2:Mm9::chr8:64192378..64192389,+#_903fc1a77cfcda86161f05096b032e4bp@chr8:64192378..64192389, +
1.7e-67FFCP PHASE1:Mm9::chr8:64192378..64192389,+#_903fc1a77cfcda86161f05096b032e4bp@chr8:64192378..64192389, +
2.4e-66FFCP PHASE2:Hg19::chr6:22919616..22919625,-#_ef9e60aa605308fb2b70b85a9d17f6f9p@chr6:22919616..22919625, -
2.4e-66FFCP PHASE1:Hg19::chr9:129830560..129830568,+#_ef9e60aa605308fb2b70b85a9d17f6f9p@chr9:129830560..129830568, +
2.4e-66FFCP PHASE2:Hg19::chr2:127873614..127873626,+#_ef9e60aa605308fb2b70b85a9d17f6f9+, p@chr2:127873614..127873626
2.4e-66FFCP PHASE1:Hg19::chr2:127873614..127873626,+#_ef9e60aa605308fb2b70b85a9d17f6f9p@chr2:127873614..127873626, +
2.4e-66FFCP PHASE1:Hg19::chr1:111023361..111023366,+#_ef9e60aa605308fb2b70b85a9d17f6f9p1@CYMP
2.4e-66FFCP PHASE2:Hg19::chr13:46093155..46093164,+#_ef9e60aa605308fb2b70b85a9d17f6f9p@chr13:46093155..46093164, +
2.4e-66FFCP PHASE2:Hg19::chr9:129830560..129830568,+#_ef9e60aa605308fb2b70b85a9d17f6f9p@chr9:129830560..129830568, +
2.4e-66FFCP PHASE1:Hg19::chr6:22919616..22919625,-#_ef9e60aa605308fb2b70b85a9d17f6f9p@chr6:22919616..22919625, -
2.4e-66FFCP PHASE1:Hg19::chr18:7034928..7034943,-#_ef9e60aa605308fb2b70b85a9d17f6f9p@chr18:7034928..7034943, -
2.4e-66FFCP PHASE2:Hg19::chr7:117329764..117329777,+#_ef9e60aa605308fb2b70b85a9d17f6f9p1@ENST00000429014
2.4e-66FFCP PHASE2:Hg19::chr18:7034928..7034943,-#_ef9e60aa605308fb2b70b85a9d17f6f9p@chr18:7034928..7034943, -
2.4e-66FFCP PHASE2:Hg19::chr1:111023361..111023366,+#_ef9e60aa605308fb2b70b85a9d17f6f9p1@CYMP
2.4e-66FFCP PHASE1:Hg19::chr7:117329764..117329777,+#_ef9e60aa605308fb2b70b85a9d17f6f9p1@ENST00000429014
2.4e-66FFCP PHASE1:Hg19::chr13:46093155..46093164,+#_ef9e60aa605308fb2b70b85a9d17f6f9p@chr13:46093155..46093164, +
3.35e-66FFCP PHASE1:Hg19::chr20:17691468..17691474,-#_5767680774b505ef73ead78f95e8cb26p@chr20:17691468..17691474, -
3.35e-66FFCP PHASE1:Hg19::chr2:205409703..205409714,+#_5767680774b505ef73ead78f95e8cb26p@chr2:205409703..205409714, +
3.35e-66FFCP PHASE2:Hg19::chrX:21849506..21849512,-#_5767680774b505ef73ead78f95e8cb26p@chrX:21849506..21849512, -
3.35e-66FFCP PHASE1:Hg19::chrX:21849506..21849512,-#_5767680774b505ef73ead78f95e8cb26p@chrX:21849506..21849512, -
3.35e-66FFCP PHASE2:Hg19::chr20:17691468..17691474,-#_5767680774b505ef73ead78f95e8cb26-, p@chr20:17691468..17691474
3.35e-66FFCP PHASE2:Hg19::chr2:205409703..205409714,+#_5767680774b505ef73ead78f95e8cb26p@chr2:205409703..205409714, +
3.35e-66FFCP PHASE1:Hg19::chr1:6420713..6420725,-#_5767680774b505ef73ead78f95e8cb26p16@ACOT7
3.35e-66FFCP PHASE2:Hg19::chr1:6420713..6420725,-#_5767680774b505ef73ead78f95e8cb26p16@ACOT7
4.67e-66FFCP PHASE1:Hg19::chr2:28340361..28340371,+#_34be8e77302a9cfe3351a13f89fb6568p@chr2:28340361..28340371, +
4.67e-66FFCP PHASE2:Hg19::chr11:89925073..89925074,+#_34be8e77302a9cfe3351a13f89fb6568p@chr11:89925073..89925074, +
4.67e-66FFCP PHASE2:Hg19::chr2:28340361..28340371,+#_34be8e77302a9cfe3351a13f89fb6568p@chr2:28340361..28340371, +
4.67e-66FFCP PHASE1:Hg19::chr11:89925073..89925074,+#_34be8e77302a9cfe3351a13f89fb6568p@chr11:89925073..89925074, +
4.67e-66FFCP PHASE1:Hg19::chr9:138591077..138591111,-#_34be8e77302a9cfe3351a13f89fb6568p@chr9:138591077..138591111, -
4.67e-66FFCP PHASE2:Hg19::chr9:138591077..138591111,-#_34be8e77302a9cfe3351a13f89fb6568p@chr9:138591077..138591111, -
3.55e-65FFCP PHASE2:Mm9::chr3:122215917..122215967,-#_43031b48511fef8b81b32f456a92053ap@chr3:122215917..122215967, -
3.55e-65FFCP PHASE1:Mm9::chr3:122215917..122215967,-#_43031b48511fef8b81b32f456a92053ap@chr3:122215917..122215967, -
7.03e-65FFCP PHASE2:Mm9::chr2:143738263..143738267,+#_df90084f72cbd9d7e133a801de0db761p@chr2:143738263..143738267, +
7.03e-65FFCP PHASE1:Mm9::chr2:143738263..143738267,+#_df90084f72cbd9d7e133a801de0db761+, p@chr2:143738263..143738267
2.43e-61FFCP PHASE2:Mm9::chr5:135465906..135465912,+#_e3397b2b7c7422c22cfdca408fe31b0cp@chr5:135465906..135465912, +
2.43e-61FFCP PHASE1:Mm9::chr5:135465906..135465912,+#_e3397b2b7c7422c22cfdca408fe31b0cp@chr5:135465906..135465912, +
5.84e-61FFCP PHASE2:Mm9::chr7:4101973..4101978,-#_b1922694029fc345db5aea588adfed4bp4@Leng9
5.84e-61FFCP PHASE1:Mm9::chr7:4101973..4101978,-#_b1922694029fc345db5aea588adfed4bp4@Leng9
1.29e-60FFCP PHASE1:Mm9::chr7:4101821..4101832,-#_48e4b2385c7109b6805e555a696a06e2p5@Leng9
1.29e-60FFCP PHASE2:Mm9::chr7:4101821..4101832,-#_48e4b2385c7109b6805e555a696a06e2p5@Leng9
5.24e-58FFCP PHASE2:Mm9::chr12:86771033..86771037,-#_aba62ed15d3669a8eba30dc4be302978p@chr12:86771033..86771037, -
5.24e-58FFCP PHASE1:Mm9::chr12:86771033..86771037,-#_aba62ed15d3669a8eba30dc4be302978p@chr12:86771033..86771037, -
6.35e-57FFCP PHASE2:Mm9::chr5:145119593..145119596,+#_25f7bdc0b7f2a73cf16eec6ec95d22a1p@chr5:145119593..145119596, +
6.35e-57FFCP PHASE1:Mm9::chr5:145119593..145119596,+#_25f7bdc0b7f2a73cf16eec6ec95d22a1p@chr5:145119593..145119596, +
8.86e-57FFCP PHASE1:Mm9::chr13:49066571..49066574,-#_38c9fbc95c8d508ff95f0547129a8065p@chr13:49066571..49066574, -
8.86e-57FFCP PHASE2:Mm9::chr13:49066571..49066574,-#_38c9fbc95c8d508ff95f0547129a8065p@chr13:49066571..49066574, -
1.46e-56FFCP PHASE2:Mm9::chr11:96797681..96797709,-#_1dabb16b761ef9a71455f8b9fcdefe1ep@chr11:96797681..96797709, -
1.46e-56FFCP PHASE1:Mm9::chr11:96797681..96797709,-#_1dabb16b761ef9a71455f8b9fcdefe1ep@chr11:96797681..96797709, -
2.19e-56FFCP PHASE2:Mm9::chr18:36576247..36576252,-#_198e3679efa7d9cbd628d4f99305cf1bp@chr18:36576247..36576252, -
2.19e-56FFCP PHASE1:Mm9::chr18:36576247..36576252,-#_198e3679efa7d9cbd628d4f99305cf1bp@chr18:36576247..36576252, -
5.47e-56FFCP PHASE1:Mm9::chr9:66888939..66888949,+#_159d2dd068730768f1bddad58f180c13p@chr9:66888939..66888949, +
5.47e-56FFCP PHASE2:Mm9::chr9:66888939..66888949,+#_159d2dd068730768f1bddad58f180c13p@chr9:66888939..66888949, +
6.45e-56FFCP PHASE2:Mm9::chr17:46693370..46693378,+#_94e47ed8ec969f286b101e06ecd0d547p@chr17:46693370..46693378, +
6.45e-56FFCP PHASE1:Mm9::chr17:46693370..46693378,+#_94e47ed8ec969f286b101e06ecd0d547p@chr17:46693370..46693378, +
1.93e-53FFCP PHASE1:Mm9::chr7:52317191..52317193,+#_4b6ef9fcd4297c790abf6accca71eb3cp@chr7:52317191..52317193, +
1.93e-53FFCP PHASE2:Mm9::chr7:52317191..52317193,+#_4b6ef9fcd4297c790abf6accca71eb3cp@chr7:52317191..52317193, +
2.55e-53FFCP PHASE2:Mm9::chr5:135442713..135442733,+#_e534c60445ad1366e4af67d8ea4ce245p@chr5:135442713..135442733, +
2.55e-53FFCP PHASE1:Mm9::chr5:135442713..135442733,+#_e534c60445ad1366e4af67d8ea4ce245p@chr5:135442713..135442733, +
5.3e-53FFCP PHASE2:Mm9::chr2:38781010..38781017,+#_f71cf93e6c05cac7a934bd4fe163bafcp@chr2:38781010..38781017, +
5.3e-53FFCP PHASE1:Mm9::chr2:38781010..38781017,+#_f71cf93e6c05cac7a934bd4fe163bafcp@chr2:38781010..38781017, +
3.46e-52FFCP PHASE2:Mm9::chr10:80565428..80565433,+#_a30cb2bf18fbdc561cc83e158b6d8a4bp@chr10:80565428..80565433, +
3.46e-52FFCP PHASE1:Mm9::chr10:80565428..80565433,+#_a30cb2bf18fbdc561cc83e158b6d8a4bp@chr10:80565428..80565433, +
7.4e-52FFCP PHASE2:Mm9::chr11:35759012..35759018,+#_23b4b7aa7601904c52c3bf544680c4dep@chr11:35759012..35759018, +
7.4e-52FFCP PHASE1:Mm9::chr11:35759012..35759018,+#_23b4b7aa7601904c52c3bf544680c4dep@chr11:35759012..35759018, +
1.0e-51FFCP PHASE2:Mm9::chr18:66636209..66636215,-#_d572d5bdb9ba96989db871d2004df55dp@chr18:66636209..66636215, -
1.0e-51FFCP PHASE1:Mm9::chr18:66636209..66636215,-#_d572d5bdb9ba96989db871d2004df55dp@chr18:66636209..66636215, -
1.17e-51FFCP PHASE1:Mm9::chr16:78268076..78268083,-#_d5d9517686d3b7fdd53823a313635c4bp@chr16:78268076..78268083, -
1.17e-51FFCP PHASE2:Mm9::chr16:78268076..78268083,-#_d5d9517686d3b7fdd53823a313635c4bp@chr16:78268076..78268083, -
3.1e-50FFCP PHASE2:Hg19::chr8:107667666..107667673,+#_7e6581131c419b311d0470589086ca73p@chr8:107667666..107667673, +
3.1e-50FFCP PHASE1:Hg19::chr16:53671764..53671771,-#_7e6581131c419b311d0470589086ca73p@chr16:53671764..53671771, -
3.1e-50FFCP PHASE1:Hg19::chr3:148164872..148164919,-#_7e6581131c419b311d0470589086ca73p@chr3:148164872..148164919, -
3.1e-50FFCP PHASE2:Hg19::chr8:128807259..128807281,+#_7e6581131c419b311d0470589086ca73p@chr8:128807259..128807281, +
3.1e-50FFCP PHASE1:Hg19::chr9:104610923..104610939,-#_7e6581131c419b311d0470589086ca73p@chr9:104610923..104610939, -
3.1e-50FFCP PHASE2:Hg19::chr4:157174023..157174034,+#_7e6581131c419b311d0470589086ca73p@chr4:157174023..157174034, +
3.1e-50FFCP PHASE2:Hg19::chr12:77730114..77730120,-#_7e6581131c419b311d0470589086ca73p@chr12:77730114..77730120, -
3.1e-50FFCP PHASE2:Hg19::chr9:104610923..104610939,-#_7e6581131c419b311d0470589086ca73p@chr9:104610923..104610939, -
3.1e-50FFCP PHASE1:Hg19::chr6:5491081..5491106,+#_7e6581131c419b311d0470589086ca73p@chr6:5491081..5491106, +
3.1e-50FFCP PHASE2:Hg19::chr8:128418747..128418756,-#_7e6581131c419b311d0470589086ca73p@chr8:128418747..128418756, -
3.1e-50FFCP PHASE1:Hg19::chr5:57619538..57619575,-#_7e6581131c419b311d0470589086ca73p@chr5:57619538..57619575, -
3.1e-50FFCP PHASE1:Hg19::chr7:87232440..87232448,-#_7e6581131c419b311d0470589086ca73p@chr7:87232440..87232448, -
3.1e-50FFCP PHASE2:Hg19::chr13:28541425..28541439,-#_7e6581131c419b311d0470589086ca73p@chr13:28541425..28541439, -
3.1e-50FFCP PHASE1:Hg19::chr13:28541425..28541439,-#_7e6581131c419b311d0470589086ca73p@chr13:28541425..28541439, -
3.1e-50FFCP PHASE2:Hg19::chr3:148164872..148164919,-#_7e6581131c419b311d0470589086ca73p@chr3:148164872..148164919, -
3.1e-50FFCP PHASE2:Hg19::chr13:54830821..54830841,+#_7e6581131c419b311d0470589086ca73p@chr13:54830821..54830841, +
3.1e-50FFCP PHASE1:Hg19::chr12:65277574..65277589,+#_7e6581131c419b311d0470589086ca73p2@FLJ41278
3.1e-50FFCP PHASE1:Hg19::chr3:171088092..171088113,-#_7e6581131c419b311d0470589086ca73-, p@chr3:171088092..171088113
3.1e-50FFCP PHASE2:Hg19::chr1:78621016..78621042,+#_7e6581131c419b311d0470589086ca73p@chr1:78621016..78621042, +
3.1e-50FFCP PHASE2:Hg19::chr8:39792182..39792188,+#_7e6581131c419b311d0470589086ca73p14@IDO2
3.1e-50FFCP PHASE2:Hg19::chr10:2328652..2328660,+#_7e6581131c419b311d0470589086ca73p@chr10:2328652..2328660, +
3.1e-50FFCP PHASE2:Hg19::chr3:140054724..140054735,-#_7e6581131c419b311d0470589086ca73p@chr3:140054724..140054735, -
3.1e-50FFCP PHASE1:Hg19::chr14:26793415..26793426,-#_7e6581131c419b311d0470589086ca73p@chr14:26793415..26793426, -
3.1e-50FFCP PHASE1:Hg19::chr6:8389389..8389429,-#_7e6581131c419b311d0470589086ca73p@chr6:8389389..8389429, -