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UBERON:0001277

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Name:intestinal epithelium
Namespace:FANTOM
Definition:"Simple columnar epithelium that lines the intestine, sometimes pseudostratified, with absorptive brush-border cells and mucous goblet cells clearly visible. <a href
Xrefs:
links:

BTO:0000781
FMA:17229
MA:0001536
ncithesaurus:Intestinal_Epithelium
SCTID:266135004
TAO:0005124

ZFA:0005124
Synonyms: "bowel epithelial tissue" EXACT [OBOL:automatic]
"bowel epithelium" EXACT [OBOL:automatic]
"epithelial tissue of bowel" EXACT [OBOL:automatic]
"epithelial tissue of intestine" EXACT [OBOL:automatic]
"epithelium of bowel" EXACT [OBOL:automatic]
"epithelium of intestine" EXACT [OBOL:automatic]
"intestine epithelial tissue" EXACT [OBOL:automatic]
"intestine epithelium" RELATED []
"villous epithelium" EXACT [ZFA:0005124]
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FMA_17229-ZFA_0005124
Subset: uberon_slim
vertebrate_core

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0000485(simple columnar epithelium),UBERON:0003350(epithelium of mucosa),UBERON:0003929(gut epithelium),UBERON:0004808(gastrointestinal system epithelium)
part_of:UBERON:0000160(intestine),UBERON:0001242(intestinal mucosa)



Children

is a:UBERON:0001902 (epithelium of small intestine)
part of:CL:0000510 (paneth cell),UBERON:0001213 (intestinal villus),CL:0002563 (intestinal epithelial cell)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001277 (intestinal epithelium), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.55e-98FFCP PHASE1:Hg19::chr9:35801527..35801540,+#_5f14daa9cb2e9b8e2c2d0c5211b5176ep@chr9:35801527..35801540, +
1.55e-98FFCP PHASE2:Hg19::chr9:35801527..35801540,+#_5f14daa9cb2e9b8e2c2d0c5211b5176ep@chr9:35801527..35801540, +
4.97e-77FFCP PHASE2:Mm9::chr8:122335239..122335244,+#_22372d00caf071c04e6e1e73cc442dc2p@chr8:122335239..122335244, +
4.97e-77FFCP PHASE1:Mm9::chr8:122335239..122335244,+#_22372d00caf071c04e6e1e73cc442dc2p@chr8:122335239..122335244, +
1.86e-71FFCP PHASE1:Mm9::chr17:57201412..57201418,-#_2e0e0751050731fe732ef2d8550e752bp@chr17:57201412..57201418, -
1.86e-71FFCP PHASE2:Mm9::chr17:57201412..57201418,-#_2e0e0751050731fe732ef2d8550e752bp@chr17:57201412..57201418, -
1.41e-68FFCP PHASE2:Mm9::chr4:155434167..155434177,+#_12736514d8c7e7f7ad4978884648f0e1p@chr4:155434167..155434177, +
1.41e-68FFCP PHASE1:Mm9::chr4:155434167..155434177,+#_12736514d8c7e7f7ad4978884648f0e1p@chr4:155434167..155434177, +
1.7e-67FFCP PHASE1:Mm9::chr8:64192378..64192389,+#_c2532a5063daf34237811b0b9fcd774fp@chr8:64192378..64192389, +
1.7e-67FFCP PHASE2:Mm9::chr8:64192378..64192389,+#_c2532a5063daf34237811b0b9fcd774fp@chr8:64192378..64192389, +
2.4e-66FFCP PHASE1:Hg19::chr2:127873614..127873626,+#_7048fba6bc3dda713b803b2881392f00p@chr2:127873614..127873626, +
2.4e-66FFCP PHASE2:Hg19::chr9:129830560..129830568,+#_7048fba6bc3dda713b803b2881392f00p@chr9:129830560..129830568, +
2.4e-66FFCP PHASE1:Hg19::chr1:111023361..111023366,+#_7048fba6bc3dda713b803b2881392f00p1@CYMP
2.4e-66FFCP PHASE2:Hg19::chr13:46093155..46093164,+#_7048fba6bc3dda713b803b2881392f00p@chr13:46093155..46093164, +
2.4e-66FFCP PHASE2:Hg19::chr7:117329764..117329777,+#_7048fba6bc3dda713b803b2881392f00p1@ENST00000429014
2.4e-66FFCP PHASE1:Hg19::chr6:22919616..22919625,-#_7048fba6bc3dda713b803b2881392f00p@chr6:22919616..22919625, -
2.4e-66FFCP PHASE1:Hg19::chr18:7034928..7034943,-#_7048fba6bc3dda713b803b2881392f00p@chr18:7034928..7034943, -
2.4e-66FFCP PHASE2:Hg19::chr1:111023361..111023366,+#_7048fba6bc3dda713b803b2881392f00p1@CYMP
2.4e-66FFCP PHASE2:Hg19::chr18:7034928..7034943,-#_7048fba6bc3dda713b803b2881392f00p@chr18:7034928..7034943, -
2.4e-66FFCP PHASE1:Hg19::chr7:117329764..117329777,+#_7048fba6bc3dda713b803b2881392f00p1@ENST00000429014
2.4e-66FFCP PHASE2:Hg19::chr6:22919616..22919625,-#_7048fba6bc3dda713b803b2881392f00p@chr6:22919616..22919625, -
2.4e-66FFCP PHASE1:Hg19::chr13:46093155..46093164,+#_7048fba6bc3dda713b803b2881392f00p@chr13:46093155..46093164, +
2.4e-66FFCP PHASE2:Hg19::chr2:127873614..127873626,+#_7048fba6bc3dda713b803b2881392f00+, p@chr2:127873614..127873626
2.4e-66FFCP PHASE1:Hg19::chr9:129830560..129830568,+#_7048fba6bc3dda713b803b2881392f00p@chr9:129830560..129830568, +
3.35e-66FFCP PHASE2:Hg19::chrX:21849506..21849512,-#_c5fbe3a48348b1afe09da4496ffa7bc7p@chrX:21849506..21849512, -
3.35e-66FFCP PHASE1:Hg19::chr2:205409703..205409714,+#_c5fbe3a48348b1afe09da4496ffa7bc7p@chr2:205409703..205409714, +
3.35e-66FFCP PHASE2:Hg19::chr20:17691468..17691474,-#_c5fbe3a48348b1afe09da4496ffa7bc7-, p@chr20:17691468..17691474
3.35e-66FFCP PHASE1:Hg19::chrX:21849506..21849512,-#_c5fbe3a48348b1afe09da4496ffa7bc7p@chrX:21849506..21849512, -
3.35e-66FFCP PHASE2:Hg19::chr1:6420713..6420725,-#_c5fbe3a48348b1afe09da4496ffa7bc7p16@ACOT7
3.35e-66FFCP PHASE2:Hg19::chr2:205409703..205409714,+#_c5fbe3a48348b1afe09da4496ffa7bc7p@chr2:205409703..205409714, +
3.35e-66FFCP PHASE1:Hg19::chr1:6420713..6420725,-#_c5fbe3a48348b1afe09da4496ffa7bc7p16@ACOT7
3.35e-66FFCP PHASE1:Hg19::chr20:17691468..17691474,-#_c5fbe3a48348b1afe09da4496ffa7bc7p@chr20:17691468..17691474, -
4.67e-66FFCP PHASE2:Hg19::chr9:138591077..138591111,-#_8f14625ba3d0d7ad5b1f0609d35ac5c6p@chr9:138591077..138591111, -
4.67e-66FFCP PHASE1:Hg19::chr11:89925073..89925074,+#_8f14625ba3d0d7ad5b1f0609d35ac5c6p@chr11:89925073..89925074, +
4.67e-66FFCP PHASE1:Hg19::chr9:138591077..138591111,-#_8f14625ba3d0d7ad5b1f0609d35ac5c6p@chr9:138591077..138591111, -
4.67e-66FFCP PHASE2:Hg19::chr11:89925073..89925074,+#_8f14625ba3d0d7ad5b1f0609d35ac5c6p@chr11:89925073..89925074, +
4.67e-66FFCP PHASE1:Hg19::chr2:28340361..28340371,+#_8f14625ba3d0d7ad5b1f0609d35ac5c6p@chr2:28340361..28340371, +
4.67e-66FFCP PHASE2:Hg19::chr2:28340361..28340371,+#_8f14625ba3d0d7ad5b1f0609d35ac5c6p@chr2:28340361..28340371, +
3.55e-65FFCP PHASE1:Mm9::chr3:122215917..122215967,-#_e57ca6e9a27e2ce1565ab3232c79b402p@chr3:122215917..122215967, -
3.55e-65FFCP PHASE2:Mm9::chr3:122215917..122215967,-#_e57ca6e9a27e2ce1565ab3232c79b402p@chr3:122215917..122215967, -
7.03e-65FFCP PHASE2:Mm9::chr2:143738263..143738267,+#_3d94fb60b4518756f0b5c8b80b70e547p@chr2:143738263..143738267, +
7.03e-65FFCP PHASE1:Mm9::chr2:143738263..143738267,+#_3d94fb60b4518756f0b5c8b80b70e547+, p@chr2:143738263..143738267
2.43e-61FFCP PHASE1:Mm9::chr5:135465906..135465912,+#_b8033ce264f1e858348835f254ab4fc5p@chr5:135465906..135465912, +
2.43e-61FFCP PHASE2:Mm9::chr5:135465906..135465912,+#_b8033ce264f1e858348835f254ab4fc5p@chr5:135465906..135465912, +
5.84e-61FFCP PHASE1:Mm9::chr7:4101973..4101978,-#_7ce70bdbf2d222efae735b37c899894dp4@Leng9
5.84e-61FFCP PHASE2:Mm9::chr7:4101973..4101978,-#_7ce70bdbf2d222efae735b37c899894dp4@Leng9
1.29e-60FFCP PHASE1:Mm9::chr7:4101821..4101832,-#_06426ab8272a70a48ba6cd8c5891a0a1p5@Leng9
1.29e-60FFCP PHASE2:Mm9::chr7:4101821..4101832,-#_06426ab8272a70a48ba6cd8c5891a0a1p5@Leng9
5.24e-58FFCP PHASE2:Mm9::chr12:86771033..86771037,-#_9613e0aa713778bcac15063a2d63a1fap@chr12:86771033..86771037, -
5.24e-58FFCP PHASE1:Mm9::chr12:86771033..86771037,-#_9613e0aa713778bcac15063a2d63a1fap@chr12:86771033..86771037, -
6.35e-57FFCP PHASE2:Mm9::chr5:145119593..145119596,+#_57aaec4fc472d7acdccd74d4ae5d240dp@chr5:145119593..145119596, +
6.35e-57FFCP PHASE1:Mm9::chr5:145119593..145119596,+#_57aaec4fc472d7acdccd74d4ae5d240dp@chr5:145119593..145119596, +
8.86e-57FFCP PHASE2:Mm9::chr13:49066571..49066574,-#_ff21f4706f2a54f972a3c44d2365c16dp@chr13:49066571..49066574, -
8.86e-57FFCP PHASE1:Mm9::chr13:49066571..49066574,-#_ff21f4706f2a54f972a3c44d2365c16dp@chr13:49066571..49066574, -
1.46e-56FFCP PHASE1:Mm9::chr11:96797681..96797709,-#_de10b43fb802cbf0365aa2c0716678b3p@chr11:96797681..96797709, -
1.46e-56FFCP PHASE2:Mm9::chr11:96797681..96797709,-#_de10b43fb802cbf0365aa2c0716678b3p@chr11:96797681..96797709, -
2.19e-56FFCP PHASE1:Mm9::chr18:36576247..36576252,-#_7d32566913575c760bd7b489b327a79ep@chr18:36576247..36576252, -
2.19e-56FFCP PHASE2:Mm9::chr18:36576247..36576252,-#_7d32566913575c760bd7b489b327a79ep@chr18:36576247..36576252, -
5.47e-56FFCP PHASE1:Mm9::chr9:66888939..66888949,+#_9f764d1715a8d5192e3ca90a8d106d49p@chr9:66888939..66888949, +
5.47e-56FFCP PHASE2:Mm9::chr9:66888939..66888949,+#_9f764d1715a8d5192e3ca90a8d106d49p@chr9:66888939..66888949, +
6.45e-56FFCP PHASE2:Mm9::chr17:46693370..46693378,+#_ca05fcaebac12321071eab5e6c35ac8dp@chr17:46693370..46693378, +
6.45e-56FFCP PHASE1:Mm9::chr17:46693370..46693378,+#_ca05fcaebac12321071eab5e6c35ac8dp@chr17:46693370..46693378, +
1.93e-53FFCP PHASE2:Mm9::chr7:52317191..52317193,+#_5fb4dac18f4de899971cb843c2652fbap@chr7:52317191..52317193, +
1.93e-53FFCP PHASE1:Mm9::chr7:52317191..52317193,+#_5fb4dac18f4de899971cb843c2652fbap@chr7:52317191..52317193, +
2.55e-53FFCP PHASE1:Mm9::chr5:135442713..135442733,+#_a62e44d360f7f8f8b40867882353a6acp@chr5:135442713..135442733, +
2.55e-53FFCP PHASE2:Mm9::chr5:135442713..135442733,+#_a62e44d360f7f8f8b40867882353a6acp@chr5:135442713..135442733, +
5.3e-53FFCP PHASE1:Mm9::chr2:38781010..38781017,+#_b5ea6a098da589319097c6d8b76e1277p@chr2:38781010..38781017, +
5.3e-53FFCP PHASE2:Mm9::chr2:38781010..38781017,+#_b5ea6a098da589319097c6d8b76e1277p@chr2:38781010..38781017, +
3.46e-52FFCP PHASE1:Mm9::chr10:80565428..80565433,+#_abb205a18436bbc3925f8c5982a3ea41p@chr10:80565428..80565433, +
3.46e-52FFCP PHASE2:Mm9::chr10:80565428..80565433,+#_abb205a18436bbc3925f8c5982a3ea41p@chr10:80565428..80565433, +
7.4e-52FFCP PHASE1:Mm9::chr11:35759012..35759018,+#_584a424fda2a68fe4c4181b41852d720p@chr11:35759012..35759018, +
7.4e-52FFCP PHASE2:Mm9::chr11:35759012..35759018,+#_584a424fda2a68fe4c4181b41852d720p@chr11:35759012..35759018, +
1.0e-51FFCP PHASE1:Mm9::chr18:66636209..66636215,-#_5f0875edfb8ca63afae5d304b4dbe500p@chr18:66636209..66636215, -
1.0e-51FFCP PHASE2:Mm9::chr18:66636209..66636215,-#_5f0875edfb8ca63afae5d304b4dbe500p@chr18:66636209..66636215, -
1.17e-51FFCP PHASE2:Mm9::chr16:78268076..78268083,-#_ff045949e558e5a6c13189d8f6867e55p@chr16:78268076..78268083, -
1.17e-51FFCP PHASE1:Mm9::chr16:78268076..78268083,-#_ff045949e558e5a6c13189d8f6867e55p@chr16:78268076..78268083, -
3.1e-50FFCP PHASE2:Hg19::chr16:19661585..19661596,+#_849581c949fa06749f8828a1928efcb7p@chr16:19661585..19661596, +
3.1e-50FFCP PHASE2:Hg19::chr2:148148505..148148515,-#_849581c949fa06749f8828a1928efcb7p@chr2:148148505..148148515, -
3.1e-50FFCP PHASE1:Hg19::chr2:66794389..66794398,+#_849581c949fa06749f8828a1928efcb7p@chr2:66794389..66794398, +
3.1e-50FFCP PHASE2:Hg19::chr8:55331615..55331618,+#_849581c949fa06749f8828a1928efcb7p@chr8:55331615..55331618, +
3.1e-50FFCP PHASE2:Hg19::chr6:8389389..8389429,-#_849581c949fa06749f8828a1928efcb7p@chr6:8389389..8389429, -
3.1e-50FFCP PHASE2:Hg19::chr3:185823573..185823578,-#_849581c949fa06749f8828a1928efcb7p26@ETV5
3.1e-50FFCP PHASE2:Hg19::chr3:139373728..139373733,+#_849581c949fa06749f8828a1928efcb7p@chr3:139373728..139373733, +
3.1e-50FFCP PHASE2:Hg19::chr2:163302780..163302789,-#_849581c949fa06749f8828a1928efcb7p@chr2:163302780..163302789, -
3.1e-50FFCP PHASE1:Hg19::chr3:140054665..140054678,-#_849581c949fa06749f8828a1928efcb7p@chr3:140054665..140054678, -
3.1e-50FFCP PHASE2:Hg19::chr21:37143915..37143924,-#_849581c949fa06749f8828a1928efcb7p@chr21:37143915..37143924, -
3.1e-50FFCP PHASE2:Hg19::chr4:169559850..169559856,-#_849581c949fa06749f8828a1928efcb7-, p@chr4:169559850..169559856
3.1e-50FFCP PHASE1:Hg19::chr12:77730114..77730120,-#_849581c949fa06749f8828a1928efcb7p@chr12:77730114..77730120, -
3.1e-50FFCP PHASE2:Hg19::chr1:93128331..93128338,-#_849581c949fa06749f8828a1928efcb7p@chr1:93128331..93128338, -
3.1e-50FFCP PHASE1:Hg19::chrX:42162203..42162241,+#_849581c949fa06749f8828a1928efcb7p@chrX:42162203..42162241, +
3.1e-50FFCP PHASE2:Hg19::chr6:104674708..104674749,-#_849581c949fa06749f8828a1928efcb7p@chr6:104674708..104674749, -
3.1e-50FFCP PHASE2:Hg19::chr8:128418828..128418839,-#_849581c949fa06749f8828a1928efcb7p@chr8:128418828..128418839, -
3.1e-50FFCP PHASE1:Hg19::chr2:43616324..43616335,-#_849581c949fa06749f8828a1928efcb7p@chr2:43616324..43616335, -
3.1e-50FFCP PHASE2:Hg19::chr12:65277574..65277589,+#_849581c949fa06749f8828a1928efcb7p2@FLJ41278
3.1e-50FFCP PHASE1:Hg19::chr7:87049573..87049608,-#_849581c949fa06749f8828a1928efcb7p@chr7:87049573..87049608, -
3.1e-50FFCP PHASE2:Hg19::chr1:19522690..19522704,-#_849581c949fa06749f8828a1928efcb7-, p@chr1:19522690..19522704
3.1e-50FFCP PHASE2:Hg19::chr7:89797154..89797172,+#_849581c949fa06749f8828a1928efcb7p9@STEAP2
3.1e-50FFCP PHASE2:Hg19::chr5:71987749..71987774,-#_849581c949fa06749f8828a1928efcb7-, p@chr5:71987749..71987774
3.1e-50FFCP PHASE2:Hg19::chr8:128259602..128259609,-#_849581c949fa06749f8828a1928efcb7p@chr8:128259602..128259609, -
3.1e-50FFCP PHASE2:Hg19::chr15:45950558..45950561,+#_849581c949fa06749f8828a1928efcb7+, p@chr15:45950558..45950561










Property "Property value" (as page type) with input value "UBPROP:0000001 "Simple columnar epithelium that lines the intestine, sometimes pseudostratified, with absorptive brush-border cells and mucous goblet cells clearly visible. Crosnier et al. 2005[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.