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UBERON:0001005

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Name:respiratory airway
Namespace:FANTOM
Definition:"An airway through which respiratory air passes in organisms." [Wikipedia:Trachea]
Xrefs:
links:
SCTID:361380005
Comments:This class generically groups trachea and analagous structures throughout metazoa. Consider renaming, as the term could be taken to mean lumen of tracheal system (e.g. in SNOMED)
Alt_id: UBERON:FBbt_00005043-FMA_7394-MA_0000441-MIAA_0000137-XAO_0000118
Subset: grouping_class
uberon_slim

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0003103(compound organ)
part_of:UBERON:0001004(respiratory system)



Children

is a:UBERON:0000065 (respiratory tract),UBERON:0003127 (open tracheal system trachea)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001005 (respiratory airway), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.58e-86FFCP PHASE1:Mm9::chr6:147338308..147338339,-#_da6a027fa21323dc271a7267aa350cdbp@chr6:147338308..147338339, -
1.58e-86FFCP PHASE1:Mm9::chr12:17549752..17549763,+#_da6a027fa21323dc271a7267aa350cdbp@chr12:17549752..17549763, +
1.58e-86FFCP PHASE2:Mm9::chr5:135420996..135421000,+#_da6a027fa21323dc271a7267aa350cdbp@chr5:135420996..135421000, +
1.58e-86FFCP PHASE2:Mm9::chr6:147205677..147205683,+#_da6a027fa21323dc271a7267aa350cdbp@chr6:147205677..147205683, +
1.58e-86FFCP PHASE2:Mm9::chr13:115644652..115644657,-#_da6a027fa21323dc271a7267aa350cdbp@chr13:115644652..115644657, -
1.58e-86FFCP PHASE1:Mm9::chr13:72401408..72401416,-#_da6a027fa21323dc271a7267aa350cdbp@chr13:72401408..72401416, -
1.58e-86FFCP PHASE1:Mm9::chr4:88563185..88563192,-#_da6a027fa21323dc271a7267aa350cdbp@chr4:88563185..88563192, -
1.58e-86FFCP PHASE2:Mm9::chr5:91198876..91198885,+#_da6a027fa21323dc271a7267aa350cdbp@chr5:91198876..91198885, +
1.58e-86FFCP PHASE1:Mm9::chr2:60538178..60538182,-#_da6a027fa21323dc271a7267aa350cdbp@chr2:60538178..60538182, -
1.58e-86FFCP PHASE2:Mm9::chr2:164389604..164389615,+#_da6a027fa21323dc271a7267aa350cdbp@chr2:164389604..164389615, +
1.58e-86FFCP PHASE2:Mm9::chr13:72401408..72401416,-#_da6a027fa21323dc271a7267aa350cdbp@chr13:72401408..72401416, -
1.58e-86FFCP PHASE1:Mm9::chr2:164389604..164389615,+#_da6a027fa21323dc271a7267aa350cdbp@chr2:164389604..164389615, +
1.58e-86FFCP PHASE1:Mm9::chr5:91198876..91198885,+#_da6a027fa21323dc271a7267aa350cdbp@chr5:91198876..91198885, +
1.58e-86FFCP PHASE1:Mm9::chr9:110941246..110941254,+#_da6a027fa21323dc271a7267aa350cdbp@chr9:110941246..110941254, +
1.58e-86FFCP PHASE2:Mm9::chr11:86461733..86461747,-#_da6a027fa21323dc271a7267aa350cdbp@chr11:86461733..86461747, -
1.58e-86FFCP PHASE2:Mm9::chr3:89487103..89487111,-#_da6a027fa21323dc271a7267aa350cdbp@chr3:89487103..89487111, -
1.58e-86FFCP PHASE2:Mm9::chr12:17549752..17549763,+#_da6a027fa21323dc271a7267aa350cdbp@chr12:17549752..17549763, +
1.58e-86FFCP PHASE2:Mm9::chr9:110941233..110941240,+#_da6a027fa21323dc271a7267aa350cdbp@chr9:110941233..110941240, +
1.58e-86FFCP PHASE2:Mm9::chr4:88696144..88696152,+#_da6a027fa21323dc271a7267aa350cdbp3@Gm12603
1.58e-86FFCP PHASE2:Mm9::chr11:100006864..100006873,+#_da6a027fa21323dc271a7267aa350cdbp@chr11:100006864..100006873, +
1.58e-86FFCP PHASE1:Mm9::chr17:25885558..25885567,+#_da6a027fa21323dc271a7267aa350cdbp@chr17:25885558..25885567, +
1.58e-86FFCP PHASE2:Mm9::chr5:91199084..91199088,-#_da6a027fa21323dc271a7267aa350cdbp@chr5:91199084..91199088, -
1.58e-86FFCP PHASE2:Mm9::chr11:96608719..96608730,-#_da6a027fa21323dc271a7267aa350cdbp1@ENSMUST00000170876, p1@uc011ydj.1
1.58e-86FFCP PHASE1:Mm9::chr1:151954385..151954387,+#_da6a027fa21323dc271a7267aa350cdbp@chr1:151954385..151954387, +
1.58e-86FFCP PHASE1:Mm9::chr2:164393992..164394012,-#_da6a027fa21323dc271a7267aa350cdbp@chr2:164393992..164394012, -
1.58e-86FFCP PHASE1:Mm9::chr16:32641594..32641601,+#_da6a027fa21323dc271a7267aa350cdbp@chr16:32641594..32641601, +
1.58e-86FFCP PHASE2:Mm9::chr11:4165247..4165267,+#_da6a027fa21323dc271a7267aa350cdbp@chr11:4165247..4165267, +
1.58e-86FFCP PHASE1:Mm9::chr3:89487103..89487111,-#_da6a027fa21323dc271a7267aa350cdb-, p@chr3:89487103..89487111
1.58e-86FFCP PHASE2:Mm9::chr9:110941246..110941254,+#_da6a027fa21323dc271a7267aa350cdbp@chr9:110941246..110941254, +
1.58e-86FFCP PHASE2:Mm9::chr4:88696177..88696184,+#_da6a027fa21323dc271a7267aa350cdbp2@Gm12603
1.58e-86FFCP PHASE1:Mm9::chr6:147205603..147205610,+#_da6a027fa21323dc271a7267aa350cdbp@chr6:147205603..147205610, +
1.58e-86FFCP PHASE2:Mm9::chr1:108303887..108303893,+#_da6a027fa21323dc271a7267aa350cdbp@chr1:108303887..108303893, +
1.58e-86FFCP PHASE1:Mm9::chr4:88696144..88696152,+#_da6a027fa21323dc271a7267aa350cdbp3@Gm12603
1.58e-86FFCP PHASE2:Mm9::chr2:164393992..164394012,-#_da6a027fa21323dc271a7267aa350cdb-, p@chr2:164393992..164394012
1.58e-86FFCP PHASE1:Mm9::chr13:115644652..115644657,-#_da6a027fa21323dc271a7267aa350cdbp@chr13:115644652..115644657, -
1.58e-86FFCP PHASE2:Mm9::chr6:147338308..147338339,-#_da6a027fa21323dc271a7267aa350cdbp@chr6:147338308..147338339, -
1.58e-86FFCP PHASE1:Mm9::chr5:91199084..91199088,-#_da6a027fa21323dc271a7267aa350cdb-, p@chr5:91199084..91199088
1.58e-86FFCP PHASE2:Mm9::chr15:101258041..101258052,+#_da6a027fa21323dc271a7267aa350cdb+, p@chr15:101258041..101258052
1.58e-86FFCP PHASE2:Mm9::chr4:88563185..88563192,-#_da6a027fa21323dc271a7267aa350cdbp@chr4:88563185..88563192, -
1.58e-86FFCP PHASE1:Mm9::chr1:108303887..108303893,+#_da6a027fa21323dc271a7267aa350cdbp@chr1:108303887..108303893, +
1.58e-86FFCP PHASE1:Mm9::chr6:147205677..147205683,+#_da6a027fa21323dc271a7267aa350cdbp@chr6:147205677..147205683, +
1.58e-86FFCP PHASE1:Mm9::chr5:135422125..135422141,-#_da6a027fa21323dc271a7267aa350cdbp@chr5:135422125..135422141, -
1.58e-86FFCP PHASE1:Mm9::chr4:88696177..88696184,+#_da6a027fa21323dc271a7267aa350cdbp2@Gm12603
1.58e-86FFCP PHASE1:Mm9::chr11:96608719..96608730,-#_da6a027fa21323dc271a7267aa350cdbp1@ENSMUST00000170876, p1@uc011ydj.1
1.58e-86FFCP PHASE1:Mm9::chr15:101258041..101258052,+#_da6a027fa21323dc271a7267aa350cdbp@chr15:101258041..101258052, +
1.58e-86FFCP PHASE2:Mm9::chr2:60538178..60538182,-#_da6a027fa21323dc271a7267aa350cdbp@chr2:60538178..60538182, -
1.58e-86FFCP PHASE1:Mm9::chr11:86461733..86461747,-#_da6a027fa21323dc271a7267aa350cdbp@chr11:86461733..86461747, -
1.58e-86FFCP PHASE1:Mm9::chr9:110941233..110941240,+#_da6a027fa21323dc271a7267aa350cdbp@chr9:110941233..110941240, +
1.58e-86FFCP PHASE2:Mm9::chr5:135422125..135422141,-#_da6a027fa21323dc271a7267aa350cdb-, p@chr5:135422125..135422141
1.58e-86FFCP PHASE2:Mm9::chr17:25885558..25885567,+#_da6a027fa21323dc271a7267aa350cdbp@chr17:25885558..25885567, +
1.58e-86FFCP PHASE1:Mm9::chr11:4165247..4165267,+#_da6a027fa21323dc271a7267aa350cdbp@chr11:4165247..4165267, +
1.58e-86FFCP PHASE2:Mm9::chr6:147205603..147205610,+#_da6a027fa21323dc271a7267aa350cdbp@chr6:147205603..147205610, +
1.58e-86FFCP PHASE1:Mm9::chr5:135420996..135421000,+#_da6a027fa21323dc271a7267aa350cdbp@chr5:135420996..135421000, +
1.58e-86FFCP PHASE2:Mm9::chr1:151954385..151954387,+#_da6a027fa21323dc271a7267aa350cdbp@chr1:151954385..151954387, +
1.58e-86FFCP PHASE2:Mm9::chr13:115722413..115722430,+#_da6a027fa21323dc271a7267aa350cdbp@chr13:115722413..115722430, +
1.58e-86FFCP PHASE1:Mm9::chr13:115722413..115722430,+#_da6a027fa21323dc271a7267aa350cdbp@chr13:115722413..115722430, +
1.58e-86FFCP PHASE2:Mm9::chr16:32641594..32641601,+#_da6a027fa21323dc271a7267aa350cdbp@chr16:32641594..32641601, +
1.58e-86FFCP PHASE1:Mm9::chr11:100006864..100006873,+#_da6a027fa21323dc271a7267aa350cdbp@chr11:100006864..100006873, +
1.33e-65FFCP PHASE1:Mm9::chr19:47939269..47939279,-#_a772082648fc3ccae618a4ae8872803fp@chr19:47939269..47939279, -
1.33e-65FFCP PHASE1:Mm9::chr14:31386795..31386797,-#_a772082648fc3ccae618a4ae8872803fp@chr14:31386795..31386797, -
1.33e-65FFCP PHASE2:Mm9::chr3:121437587..121437593,+#_a772082648fc3ccae618a4ae8872803fp@chr3:121437587..121437593, +
1.33e-65FFCP PHASE2:Mm9::chr11:4164303..4164316,+#_a772082648fc3ccae618a4ae8872803fp@chr11:4164303..4164316, +
1.33e-65FFCP PHASE1:Mm9::chr3:121437587..121437593,+#_a772082648fc3ccae618a4ae8872803fp@chr3:121437587..121437593, +
1.33e-65FFCP PHASE2:Mm9::chr11:29642912..29642916,-#_a772082648fc3ccae618a4ae8872803fp@chr11:29642912..29642916, -
1.33e-65FFCP PHASE1:Mm9::chr19:47932377..47932386,-#_a772082648fc3ccae618a4ae8872803fp@chr19:47932377..47932386, -
1.33e-65FFCP PHASE1:Mm9::chr6:147212620..147212625,+#_a772082648fc3ccae618a4ae8872803fp@chr6:147212620..147212625, +
1.33e-65FFCP PHASE1:Mm9::chr2:144564146..144564166,+#_a772082648fc3ccae618a4ae8872803fp3@Dtd1
1.33e-65FFCP PHASE2:Mm9::chr3:90392458..90392472,+#_a772082648fc3ccae618a4ae8872803fp@chr3:90392458..90392472, +
1.33e-65FFCP PHASE2:Mm9::chr2:144564146..144564166,+#_a772082648fc3ccae618a4ae8872803fp3@Dtd1
1.33e-65FFCP PHASE2:Mm9::chr14:34905716..34905718,+#_a772082648fc3ccae618a4ae8872803fp@chr14:34905716..34905718, +
1.33e-65FFCP PHASE1:Mm9::chr11:100002128..100002131,+#_a772082648fc3ccae618a4ae8872803fp@chr11:100002128..100002131, +
1.33e-65FFCP PHASE2:Mm9::chr19:47939269..47939279,-#_a772082648fc3ccae618a4ae8872803f-, p@chr19:47939269..47939279
1.33e-65FFCP PHASE1:Mm9::chr11:4164303..4164316,+#_a772082648fc3ccae618a4ae8872803fp@chr11:4164303..4164316, +
1.33e-65FFCP PHASE2:Mm9::chr14:31386795..31386797,-#_a772082648fc3ccae618a4ae8872803fp@chr14:31386795..31386797, -
1.33e-65FFCP PHASE1:Mm9::chr11:29642912..29642916,-#_a772082648fc3ccae618a4ae8872803fp@chr11:29642912..29642916, -
1.33e-65FFCP PHASE1:Mm9::chr3:90392458..90392472,+#_a772082648fc3ccae618a4ae8872803fp@chr3:90392458..90392472, +
1.33e-65FFCP PHASE1:Mm9::chrX:20383628..20383635,+#_a772082648fc3ccae618a4ae8872803fp@chrX:20383628..20383635, +
1.33e-65FFCP PHASE2:Mm9::chr6:147212620..147212625,+#_a772082648fc3ccae618a4ae8872803f+, p@chr6:147212620..147212625
1.33e-65FFCP PHASE2:Mm9::chr3:121437538..121437546,+#_a772082648fc3ccae618a4ae8872803fp@chr3:121437538..121437546, +
1.33e-65FFCP PHASE1:Mm9::chr14:34905716..34905718,+#_a772082648fc3ccae618a4ae8872803fp@chr14:34905716..34905718, +
1.33e-65FFCP PHASE2:Mm9::chrX:20383628..20383635,+#_a772082648fc3ccae618a4ae8872803fp@chrX:20383628..20383635, +
1.33e-65FFCP PHASE2:Mm9::chr11:100002128..100002131,+#_a772082648fc3ccae618a4ae8872803fp@chr11:100002128..100002131, +
1.33e-65FFCP PHASE1:Mm9::chr3:121437538..121437546,+#_a772082648fc3ccae618a4ae8872803fp@chr3:121437538..121437546, +
1.33e-65FFCP PHASE2:Mm9::chr19:47932377..47932386,-#_a772082648fc3ccae618a4ae8872803f-, p@chr19:47932377..47932386
6.04e-65FFCP PHASE1:Mm9::chr15:38385124..38385138,+#_f0d2cde98234386fabe8d8eea79ebdc5p@chr15:38385124..38385138, +
6.04e-65FFCP PHASE2:Mm9::chr19:47928736..47928764,+#_f0d2cde98234386fabe8d8eea79ebdc5p@chr19:47928736..47928764, +
6.04e-65FFCP PHASE1:Mm9::chr17:25888467..25888513,-#_f0d2cde98234386fabe8d8eea79ebdc5p@chr17:25888467..25888513, -
6.04e-65FFCP PHASE2:Mm9::chr15:38385124..38385138,+#_f0d2cde98234386fabe8d8eea79ebdc5p@chr15:38385124..38385138, +
6.04e-65FFCP PHASE1:Mm9::chr19:47928736..47928764,+#_f0d2cde98234386fabe8d8eea79ebdc5p@chr19:47928736..47928764, +
6.04e-65FFCP PHASE2:Mm9::chr1:90456476..90456498,+#_f0d2cde98234386fabe8d8eea79ebdc5p@chr1:90456476..90456498, +
6.04e-65FFCP PHASE1:Mm9::chr1:90456476..90456498,+#_f0d2cde98234386fabe8d8eea79ebdc5p@chr1:90456476..90456498, +
6.04e-65FFCP PHASE2:Mm9::chr17:25888467..25888513,-#_f0d2cde98234386fabe8d8eea79ebdc5p@chr17:25888467..25888513, -
4.76e-57FFCP PHASE2:Hg19::chr5:180017253..180017257,-#_f8c9d066b675c4cd6c4685fcc99fa894p@chr5:180017253..180017257, -
4.76e-57FFCP PHASE1:Hg19::chr5:180017253..180017257,-#_f8c9d066b675c4cd6c4685fcc99fa894p@chr5:180017253..180017257, -
4.9e-53FFCP PHASE1:Mm9::chr17:71105425..71105430,+#_bfe90d3741f734884aa04d767b029116p@chr17:71105425..71105430, +
4.9e-53FFCP PHASE2:Mm9::chr5:103804464..103804467,+#_bfe90d3741f734884aa04d767b029116p@chr5:103804464..103804467, +
4.9e-53FFCP PHASE2:Mm9::chr5:92644371..92644380,-#_bfe90d3741f734884aa04d767b029116p1@U90926
4.9e-53FFCP PHASE1:Mm9::chr11:96608968..96608974,-#_bfe90d3741f734884aa04d767b029116p2@ENSMUST00000166907
4.9e-53FFCP PHASE2:Mm9::chr6:147212455..147212462,-#_bfe90d3741f734884aa04d767b029116p6@Pthlh
4.9e-53FFCP PHASE2:Mm9::chr8:32217083..32217090,+#_bfe90d3741f734884aa04d767b029116p@chr8:32217083..32217090, +