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UBERON:0003929

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Name:gut epithelium
Namespace:FANTOM
Definition:"An epithelium that is part of a digestive tract [Obol]." [OBOL:automatic]
Xrefs:
links:

BTO:0000956
EHDAA2:0004567
ncithesaurus:Gut_Epithelium
TAO:0005123
XAO:0003200

ZFA:0005123
Synonyms: "digestive tract epithelial tissue" EXACT [OBOL:automatic]
"digestive tract epithelium" EXACT [OBOL:automatic]
"epithelial tissue of digestive tract" EXACT [OBOL:automatic]
"epithelial tissue of gut" EXACT [OBOL:automatic]
"epithelial tissue of lower gastrointestinal tract" EXACT [OBOL:automatic]
"epithelium of digestive tract" EXACT [OBOL:automatic]
"epithelium of gut" EXACT [OBOL:automatic]
"epithelium of lower gastrointestinal tract" EXACT [OBOL:automatic]
"gut epithelial tissue" EXACT [OBOL:automatic]
"lower gastrointestinal tract epithelial tissue" EXACT [OBOL:automatic]
"lower gastrointestinal tract epithelium" EXACT [OBOL:automatic]

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0000483(epithelium)
part_of:UBERON:0001555(digestive tract)



Children

is a:UBERON:0001277 (intestinal epithelium),UBERON:0002424 (oral epithelium),UBERON:0003351 (pharyngeal epithelium),UBERON:0003353 (epithelium of hindgut),UBERON:0004809 (salivary gland epithelium),UBERON:0009497 (epithelium of foregut-midgut junction),UBERON:0012481 (cloacal epithelium),UBERON:0015833 (foregut epithelium)
part of:CL:0000682 (M cell of gut),UBERON:0009497 (epithelium of foregut-midgut junction),UBERON:0009722 (entire pharyngeal arch endoderm),UBERON:0009846 (embryonic cloacal epithelium)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003929 (gut epithelium), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
8.73e-40FFCP PHASE1:Hg19::chr6:8652489..8652515,+#_247ba57cce5f63a858567239f12c76aap1@HULC
8.73e-40FFCP PHASE2:Hg19::chr6:8652489..8652515,+#_247ba57cce5f63a858567239f12c76aap1@HULC
1.57e-36FFCP PHASE1:Hg19::chr10:101841398..101841415,-#_10f577aed3495434c39c8802c1a70eb2p2@CPN1
1.57e-36FFCP PHASE2:Hg19::chr10:101841398..101841415,-#_10f577aed3495434c39c8802c1a70eb2p2@CPN1
1.73e-36FFCP PHASE2:Hg19::chr10:101841588..101841632,-#_0c57ea4035292c210697e6e12bcd33dbp1@CPN1
1.73e-36FFCP PHASE1:Hg19::chr10:101841588..101841632,-#_0c57ea4035292c210697e6e12bcd33dbp1@CPN1
2.65e-36FFCP PHASE1:Mm9::chr14:30823509..30823529,+#_3ce53c320338db13134cbe49e4eb60c6p@chr14:30823509..30823529, +
2.65e-36FFCP PHASE2:Mm9::chr14:30823509..30823529,+#_3ce53c320338db13134cbe49e4eb60c6p@chr14:30823509..30823529, +
3.89e-36FFCP PHASE1:Hg19::chr6:64231600..64231615,+#_c33f4a956f77b440ac2aa77a45b4c896p24@PTP4A1
3.89e-36FFCP PHASE2:Hg19::chr6:64231600..64231615,+#_c33f4a956f77b440ac2aa77a45b4c896p24@PTP4A1
5.11e-34FFCP PHASE1:Hg19::chr12:100867777..100867788,+#_d29fd56b7878596c930fae2299d9a9ddp5@NR1H4
5.11e-34FFCP PHASE2:Hg19::chr12:100867777..100867788,+#_d29fd56b7878596c930fae2299d9a9ddp5@NR1H4
4.28e-33FFCP PHASE1:Hg19::chr1:161192171..161192185,-#_f1992340bb88835d7ae1668aa7f909c1p@chr1:161192171..161192185, -
4.28e-33FFCP PHASE2:Hg19::chr1:161192171..161192185,-#_f1992340bb88835d7ae1668aa7f909c1p@chr1:161192171..161192185, -
1.09e-32FFCP PHASE1:Hg19::chr20:10349456..10349475,-#_3b7814aa4e5b7a0052c4dffac81dd535p1@ENST00000421143
1.09e-32FFCP PHASE2:Hg19::chr20:10349456..10349475,-#_3b7814aa4e5b7a0052c4dffac81dd535p1@ENST00000421143
7.4e-31FFCP PHASE1:Hg19::chr17:7082668..7082725,-#_58403b75bde1eaefaa8cd147962b3cb9p1@ASGR1
7.4e-31FFCP PHASE2:Hg19::chr17:7082668..7082725,-#_58403b75bde1eaefaa8cd147962b3cb9p1@ASGR1
9.27e-31FFCP PHASE2:Hg19::chr1:161192149..161192162,-#_44fc11f8d3449bde7b4744d3c7d99280p@chr1:161192149..161192162, -
9.27e-31FFCP PHASE1:Hg19::chr1:161192149..161192162,-#_44fc11f8d3449bde7b4744d3c7d99280p@chr1:161192149..161192162, -
9.81e-31FFCP PHASE1:Hg19::chr1:54359854..54359866,+#_df63937860fae7e31f953e72f651c8f9p1@DIO1
9.81e-31FFCP PHASE2:Hg19::chr1:54359854..54359866,+#_df63937860fae7e31f953e72f651c8f9p1@DIO1
1.52e-30FFCP PHASE1:Hg19::chr1:177939154..177939204,-#_d2e48b73e3c9ba60f161ec2021bc3c80p4@SEC16B
1.52e-30FFCP PHASE2:Hg19::chr1:177939154..177939204,-#_d2e48b73e3c9ba60f161ec2021bc3c80p4@SEC16B
1.82e-30FFCP PHASE2:Hg19::chr22:37505474..37505478,-#_158494b8e7750e1a0781fe2bcea9de20p3@TMPRSS6
1.82e-30FFCP PHASE1:Hg19::chr22:37505474..37505478,-#_158494b8e7750e1a0781fe2bcea9de20p3@TMPRSS6
6.95e-30FFCP PHASE1:Hg19::chr17:7082560..7082572,-#_4a2122f09a464e03b09e91aed0a326d2p4@ASGR1
6.95e-30FFCP PHASE2:Hg19::chr17:7082560..7082572,-#_4a2122f09a464e03b09e91aed0a326d2p4@ASGR1
8.03e-30FFCP PHASE1:Hg19::chr19:56653064..56653103,+#_9b50828d80acc3b53ded9d31acf3f79fp1@AK124209
8.03e-30FFCP PHASE2:Hg19::chr19:56653064..56653103,+#_9b50828d80acc3b53ded9d31acf3f79fp1@AK124209
8.91e-30FFCP PHASE2:Hg19::chr1:161192118..161192141,-#_536b715cd9223e91192b08b2c4fbfe6bp@chr1:161192118..161192141, -
8.91e-30FFCP PHASE1:Hg19::chr1:161192118..161192141,-#_536b715cd9223e91192b08b2c4fbfe6bp@chr1:161192118..161192141, -
8.91e-30FFCP PHASE1:Hg19::chr4:155528001..155528060,-#_536b715cd9223e91192b08b2c4fbfe6bp@chr4:155528001..155528060, -
8.91e-30FFCP PHASE1:Hg19::chr4:155530853..155530879,-#_536b715cd9223e91192b08b2c4fbfe6bp3@FGG
8.91e-30FFCP PHASE1:Hg19::chr4:155533277..155533357,-#_536b715cd9223e91192b08b2c4fbfe6bp2@FGG
8.91e-30FFCP PHASE2:Hg19::chr4:155528001..155528060,-#_536b715cd9223e91192b08b2c4fbfe6bp@chr4:155528001..155528060, -
8.91e-30FFCP PHASE2:Hg19::chr4:155530853..155530879,-#_536b715cd9223e91192b08b2c4fbfe6bp3@FGG
8.91e-30FFCP PHASE2:Hg19::chr4:155533277..155533357,-#_536b715cd9223e91192b08b2c4fbfe6bp2@FGG
1.01e-29FFCP PHASE1:Hg19::chr11:63137251..63137267,+#_4f6251bf32de876a966e60587cbaf63cp1@SLC22A9
1.01e-29FFCP PHASE2:Hg19::chr11:63137251..63137267,+#_4f6251bf32de876a966e60587cbaf63cp1@SLC22A9
1.04e-29FFCP PHASE2:Hg19::chr17:7017634..7017649,-#_2fcd01c288c8f54fc390e6964883c3e4p7@ASGR2
1.04e-29FFCP PHASE1:Hg19::chr17:7017634..7017649,-#_2fcd01c288c8f54fc390e6964883c3e4p7@ASGR2
1.19e-29FFCP PHASE1:Hg19::chr14:94759595..94759613,-#_00580a87423c832adc104febcf726bb9p2@SERPINA10
1.19e-29FFCP PHASE2:Hg19::chr14:94759595..94759613,-#_00580a87423c832adc104febcf726bb9p2@SERPINA10
1.32e-29FFCP PHASE2:Hg19::chr14:94759576..94759594,-#_c90401270bc5dafed23e040361c2370cp3@SERPINA10
1.32e-29FFCP PHASE1:Hg19::chr14:94759576..94759594,-#_c90401270bc5dafed23e040361c2370cp3@SERPINA10
2.94e-29FFCP PHASE1:Hg19::chr16:85832119..85832145,+#_d8018e9919e0cc6020358515c1a90bc7p@chr16:85832119..85832145, +
2.94e-29FFCP PHASE2:Hg19::chr16:85832119..85832145,+#_d8018e9919e0cc6020358515c1a90bc7p@chr16:85832119..85832145, +
3.04e-29FFCP PHASE2:Hg19::chr8:144417558..144417572,-#_adfeccf5dc6b3c2ecc9ac806fb88cd72p7@TOP1MT
3.04e-29FFCP PHASE2:Hg19::chr2:21233797..21233804,-#_adfeccf5dc6b3c2ecc9ac806fb88cd72p58@APOB
3.04e-29FFCP PHASE1:Hg19::chr8:144417558..144417572,-#_adfeccf5dc6b3c2ecc9ac806fb88cd72p7@TOP1MT
3.04e-29FFCP PHASE1:Hg19::chr2:21233797..21233804,-#_adfeccf5dc6b3c2ecc9ac806fb88cd72p58@APOB
2.05e-28FFCP PHASE1:Hg19::chr4:70361615..70361631,-#_4b66793e2b43f79c6b44d29c1003b7ddp1@UGT2B4
2.05e-28FFCP PHASE2:Hg19::chr4:70361615..70361631,-#_4b66793e2b43f79c6b44d29c1003b7ddp1@UGT2B4
2.17e-28FFCP PHASE2:Hg19::chr12:24191262..24191291,-#_6157cac7042ad865bb99f0d47a5763f3p@chr12:24191262..24191291, -
2.17e-28FFCP PHASE1:Hg19::chr12:24191262..24191291,-#_6157cac7042ad865bb99f0d47a5763f3p@chr12:24191262..24191291, -
2.82e-28FFCP PHASE1:Hg19::chr17:7017968..7018021,-#_f3d01571ee7fdc0d2aaf112940371178p1@ASGR2
2.82e-28FFCP PHASE2:Hg19::chr17:7017968..7018021,-#_f3d01571ee7fdc0d2aaf112940371178p1@ASGR2
6.93e-28FFCP PHASE2:Hg19::chr14:94759548..94759571,-#_d84bb538a768b21c479826d62251f4cep1@SERPINA10
6.93e-28FFCP PHASE1:Hg19::chr14:94759548..94759571,-#_d84bb538a768b21c479826d62251f4cep1@SERPINA10
7.03e-28FFCP PHASE1:Hg19::chr12:100867695..100867706,+#_efb40074455bd80e8222372d96cc65ffp6@NR1H4
7.03e-28FFCP PHASE2:Hg19::chr12:100867695..100867706,+#_efb40074455bd80e8222372d96cc65ffp6@NR1H4
8.24e-28FFCP PHASE1:Hg19::chr13:113760134..113760150,+#_f905d6e6a07c2caf11324e5446b7d8afp2@F7
8.24e-28FFCP PHASE2:Hg19::chr13:113760134..113760150,+#_f905d6e6a07c2caf11324e5446b7d8afp2@F7
1.62e-27FFCP PHASE1:Hg19::chr6:64231645..64231678,+#_688411b0213291552e1bdd1f878e39eep6@PTP4A1
1.62e-27FFCP PHASE2:Hg19::chr6:64231645..64231678,+#_688411b0213291552e1bdd1f878e39eep6@PTP4A1
1.87e-27FFCP PHASE2:Hg19::chr2:201171064..201171071,+#_a52f124f4de1b40367bd6b0fc9013721p19@SPATS2L
1.87e-27FFCP PHASE1:Hg19::chr2:201171064..201171071,+#_a52f124f4de1b40367bd6b0fc9013721p19@SPATS2L
2.04e-27FFCP PHASE1:Hg19::chr17:4692335..4692344,+#_2ae50247c76eb95521a85338e7adcd7bp3@GLTPD2
2.04e-27FFCP PHASE2:Hg19::chr17:4692335..4692344,+#_2ae50247c76eb95521a85338e7adcd7bp3@GLTPD2
2.4e-27FFCP PHASE1:Mm9::chr11:60622345..60622377,-#_f8e162425dff726faeb3d4438b703fbbp@chr11:60622345..60622377, -
2.4e-27FFCP PHASE2:Mm9::chr11:60622345..60622377,-#_f8e162425dff726faeb3d4438b703fbb-, p@chr11:60622345..60622377
2.64e-27FFCP PHASE2:Hg19::chr4:74283297..74283332,-#_badf688342dfef2fd79ad41b397dc506p@chr4:74283297..74283332, -
2.64e-27FFCP PHASE1:Hg19::chr4:74283297..74283332,-#_badf688342dfef2fd79ad41b397dc506p@chr4:74283297..74283332, -
5.31e-27FFCP PHASE1:Mm9::chr5:90897694..90897705,+#_1d7686694a63f664d9d154a35c4d7f01p@chr5:90897694..90897705, +
5.31e-27FFCP PHASE2:Mm9::chr5:90897694..90897705,+#_1d7686694a63f664d9d154a35c4d7f01p@chr5:90897694..90897705, +
5.91e-27FFCP PHASE1:Mm9::chr8:131012371..131012382,-#_0f7ed8479882d5c49ce892870b33a56cp2@uc009nzu.1
5.91e-27FFCP PHASE2:Mm9::chr8:131012371..131012382,-#_0f7ed8479882d5c49ce892870b33a56cp2@uc009nzu.1
5.91e-27FFCP PHASE1:Mm9::chr6:41483037..41483046,+#_0f7ed8479882d5c49ce892870b33a56cp8@uc009bpa.1
5.91e-27FFCP PHASE2:Mm9::chr6:41483037..41483046,+#_0f7ed8479882d5c49ce892870b33a56cp8@uc009bpa.1
6.71e-27FFCP PHASE2:Mm9::chr19:25169885..25169900,+#_fc931cbc585e36789b4997912a868d1cp@chr19:25169885..25169900, +
6.71e-27FFCP PHASE1:Mm9::chr19:25169885..25169900,+#_fc931cbc585e36789b4997912a868d1cp@chr19:25169885..25169900, +
6.76e-27FFCP PHASE2:Mm9::chr6:41483113..41483131,+#_8df56433f1a80b9679e984cad4d36c1ep4@uc009bpa.1
6.76e-27FFCP PHASE1:Mm9::chr6:41483113..41483131,+#_8df56433f1a80b9679e984cad4d36c1ep4@uc009bpa.1
7.17e-27FFCP PHASE1:Mm9::chr7:121912281..121912295,+#_868402581bde6ac428b4c4aae6ab7637p6@Insc
7.17e-27FFCP PHASE2:Mm9::chr7:121912281..121912295,+#_868402581bde6ac428b4c4aae6ab7637p6@Insc
7.25e-27FFCP PHASE2:Hg19::chr22:50826072..50826087,+#_f0251b5b0834c97b323fbe527497ef1ep@chr22:50826072..50826087, +
7.25e-27FFCP PHASE1:Hg19::chr22:50826072..50826087,+#_f0251b5b0834c97b323fbe527497ef1ep@chr22:50826072..50826087, +
1.11e-26FFCP PHASE2:Hg19::chr8:17752845..17752864,-#_4904c590a009562c45b8ed1e59bb6c02p2@FGL1
1.11e-26FFCP PHASE1:Hg19::chr8:17752845..17752864,-#_4904c590a009562c45b8ed1e59bb6c02p2@FGL1
1.47e-26FFCP PHASE2:Hg19::chr10:54531372..54531384,-#_14109702d381520708601089fc8f3713p1@MBL2
1.47e-26FFCP PHASE1:Hg19::chr10:54531372..54531384,-#_14109702d381520708601089fc8f3713p1@MBL2
1.5e-26FFCP PHASE1:Hg19::chr11:116706961..116706976,-#_3bcdda17208e2a9004d45d6566bd5a50p@chr11:116706961..116706976, -
1.5e-26FFCP PHASE2:Hg19::chr11:116706961..116706976,-#_3bcdda17208e2a9004d45d6566bd5a50p@chr11:116706961..116706976, -
1.57e-26FFCP PHASE2:Hg19::chrX:153769426..153769436,+#_9dd6784028cb07d643cd021901bfe5c6p18@IKBKG
1.57e-26FFCP PHASE1:Hg19::chr17:7082573..7082598,-#_9dd6784028cb07d643cd021901bfe5c6p5@ASGR1
1.57e-26FFCP PHASE1:Hg19::chrX:153769426..153769436,+#_9dd6784028cb07d643cd021901bfe5c6p18@IKBKG
1.57e-26FFCP PHASE2:Hg19::chr17:7082573..7082598,-#_9dd6784028cb07d643cd021901bfe5c6p5@ASGR1
1.77e-26FFCP PHASE2:Hg19::chr17:64210704..64210723,+#_f4c8549389df0013d007cb3659ccdbc2p@chr17:64210704..64210723, +
1.77e-26FFCP PHASE1:Hg19::chr17:64210704..64210723,+#_f4c8549389df0013d007cb3659ccdbc2p@chr17:64210704..64210723, +










Property "Property value" (as page type) with input value "UBPROP:0000001 "Epithelium lining the lumen of the gut.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.