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UBERON:0007277

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Name:presumptive hindbrain
Namespace:FANTOM
Xrefs:
links:

EFO:0003440
TAO:0000569

ZFA:0000569

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0006598(presumptive structure)
develops_from:UBERON:0003076(posterior neural tube)
part_of:UBERON:0006238(future brain)



Children

develops from:UBERON:0002028 (hindbrain)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007277 (presumptive hindbrain), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.71e-110FFCP PHASE1:Hg19::chr2:72381655..72381673,-#_68c021991af7067ce93c2f3e81d0a29fp@chr2:72381655..72381673, -
1.71e-110FFCP PHASE2:Hg19::chr2:72381655..72381673,-#_68c021991af7067ce93c2f3e81d0a29fp@chr2:72381655..72381673, -
5.84e-89FFCP PHASE1:Hg19::chr11:20621148..20621166,+#_252f0ef80f50fd74743ee022c61862e5p1@SLC6A5
5.84e-89FFCP PHASE2:Hg19::chr11:20621148..20621166,+#_252f0ef80f50fd74743ee022c61862e5p1@SLC6A5
2.65e-84FFCP PHASE2:Hg19::chr11:122733138..122733178,+#_255d149ee939be3538b87af0e123cdb5p3@CRTAM
2.65e-84FFCP PHASE1:Hg19::chr11:122733138..122733178,+#_255d149ee939be3538b87af0e123cdb5p3@CRTAM
3.05e-84FFCP PHASE2:Hg19::chr9:135457981..135458003,+#_8b7864b35933ba594696c87384b4c007p1@BARHL1
3.05e-84FFCP PHASE1:Hg19::chr9:135457981..135458003,+#_8b7864b35933ba594696c87384b4c007p1@BARHL1
4.43e-82FFCP PHASE2:Hg19::chr4:117873850..117873861,-#_b6930b0f3a58041856b6b2ded15839f8p@chr4:117873850..117873861, -
4.43e-82FFCP PHASE1:Hg19::chr6:152884391..152884402,-#_b6930b0f3a58041856b6b2ded15839f8p@chr6:152884391..152884402, -
4.43e-82FFCP PHASE2:Hg19::chr6:152884391..152884402,-#_b6930b0f3a58041856b6b2ded15839f8p@chr6:152884391..152884402, -
4.43e-82FFCP PHASE1:Hg19::chr4:117873850..117873861,-#_b6930b0f3a58041856b6b2ded15839f8p@chr4:117873850..117873861, -
6.69e-74FFCP PHASE1:Hg19::chr6:152884406..152884453,-#_f94f5933eddb4090785b3ed0549ba33cp@chr6:152884406..152884453, -
6.69e-74FFCP PHASE2:Hg19::chr6:152884406..152884453,-#_f94f5933eddb4090785b3ed0549ba33cp@chr6:152884406..152884453, -
1.11e-73FFCP PHASE2:Hg19::chr13:100311142..100311153,+#_2f83c01b797eeb98f10fdd2e2129127dp@chr13:100311142..100311153, +
1.11e-73FFCP PHASE1:Hg19::chr13:100311142..100311153,+#_2f83c01b797eeb98f10fdd2e2129127dp@chr13:100311142..100311153, +
4.59e-73FFCP PHASE1:Hg19::chr10:130489605..130489614,-#_7ace898e1f96e2cb4740cb632489aacbp@chr10:130489605..130489614, -
4.59e-73FFCP PHASE2:Hg19::chr10:130489605..130489614,-#_7ace898e1f96e2cb4740cb632489aacbp@chr10:130489605..130489614, -
3.5e-70FFCP PHASE1:Hg19::chr9:73736442..73736451,-#_e82cf00b4eeb04842b9a8fed256d7e5bp9@TRPM3
3.5e-70FFCP PHASE2:Hg19::chr9:73736442..73736451,-#_e82cf00b4eeb04842b9a8fed256d7e5bp9@TRPM3
1.26e-68FFCP PHASE2:Hg19::chr11:43855489..43855503,-#_a937bac231da90907b2ce665bf2a0c52p1@ENST00000524643
1.26e-68FFCP PHASE1:Hg19::chr3:147110022..147110050,-#_a937bac231da90907b2ce665bf2a0c52p8@ZIC4
1.26e-68FFCP PHASE2:Hg19::chr5:161112715..161112736,+#_a937bac231da90907b2ce665bf2a0c52p1@GABRA6
1.26e-68FFCP PHASE2:Hg19::chr3:147110022..147110050,-#_a937bac231da90907b2ce665bf2a0c52p8@ZIC4
1.26e-68FFCP PHASE1:Hg19::chr11:43855489..43855503,-#_a937bac231da90907b2ce665bf2a0c52p1@ENST00000524643
1.26e-68FFCP PHASE1:Hg19::chr5:161112715..161112736,+#_a937bac231da90907b2ce665bf2a0c52p1@GABRA6
1.45e-68FFCP PHASE1:Hg19::chr6:72922590..72922605,+#_5d1ca1646482e189b4562729bdb904ccp5@RIMS1
1.45e-68FFCP PHASE2:Hg19::chr6:72922590..72922605,+#_5d1ca1646482e189b4562729bdb904ccp5@RIMS1
1.67e-68FFCP PHASE2:Hg19::chr11:27742115..27742119,-#_cb53461ff11610d7c75c1c7af85ed262p17@BDNF
1.67e-68FFCP PHASE1:Hg19::chr11:27742115..27742119,-#_cb53461ff11610d7c75c1c7af85ed262p17@BDNF
6.16e-67FFCP PHASE2:Hg19::chr19:29493486..29493497,+#_484915dd3afcb085114590442e4e468ep2@LOC100505835
6.16e-67FFCP PHASE1:Hg19::chr19:29493486..29493497,+#_484915dd3afcb085114590442e4e468ep2@LOC100505835
5.11e-66FFCP PHASE1:Hg19::chr1:16366392..16366411,-#_a441d8eedf5a6701a552659d8bd53cc4p@chr1:16366392..16366411, -
5.11e-66FFCP PHASE1:Hg19::chr20:39790925..39790940,+#_a441d8eedf5a6701a552659d8bd53cc4p@chr20:39790925..39790940, +
5.11e-66FFCP PHASE1:Hg19::chr20:45061746..45061763,-#_a441d8eedf5a6701a552659d8bd53cc4p4@ELMO2
5.11e-66FFCP PHASE1:Hg19::chr11:122733033..122733052,+#_a441d8eedf5a6701a552659d8bd53cc4p4@CRTAM
5.11e-66FFCP PHASE1:Hg19::chr11:123448159..123448170,+#_a441d8eedf5a6701a552659d8bd53cc4p4@AB384137
5.11e-66FFCP PHASE1:Hg19::chr5:161112654..161112669,+#_a441d8eedf5a6701a552659d8bd53cc4p2@GABRA6
5.11e-66FFCP PHASE1:Hg19::chr5:161112968..161112988,+#_a441d8eedf5a6701a552659d8bd53cc4p3@GABRA6
5.11e-66FFCP PHASE1:Hg19::chr6:127533959..127533972,-#_a441d8eedf5a6701a552659d8bd53cc4p@chr6:127533959..127533972, -
5.11e-66FFCP PHASE1:Hg19::chr6:127533978..127533993,-#_a441d8eedf5a6701a552659d8bd53cc4p@chr6:127533978..127533993, -
5.11e-66FFCP PHASE1:Hg19::chr6:34073743..34073761,-#_a441d8eedf5a6701a552659d8bd53cc4p1@GRM4
5.11e-66FFCP PHASE1:Hg19::chr6:72922614..72922626,+#_a441d8eedf5a6701a552659d8bd53cc4p19@RIMS1
5.11e-66FFCP PHASE1:Hg19::chr6:72922728..72922737,+#_a441d8eedf5a6701a552659d8bd53cc4p29@RIMS1
5.11e-66FFCP PHASE1:Hg19::chr14:52168958..52169000,+#_a441d8eedf5a6701a552659d8bd53cc4p27@FRMD6
5.11e-66FFCP PHASE1:Hg19::chr14:60031159..60031181,-#_a441d8eedf5a6701a552659d8bd53cc4p1@ENST00000556936
5.11e-66FFCP PHASE1:Hg19::chr14:60049016..60049032,-#_a441d8eedf5a6701a552659d8bd53cc4p@chr14:60049016..60049032, -
5.11e-66FFCP PHASE1:Hg19::chr14:77582905..77582916,+#_a441d8eedf5a6701a552659d8bd53cc4p5@TMEM63C
5.11e-66FFCP PHASE1:Hg19::chr15:79724672..79724683,+#_a441d8eedf5a6701a552659d8bd53cc4p1@KIAA1024
5.11e-66FFCP PHASE1:Hg19::chr15:81489280..81489292,+#_a441d8eedf5a6701a552659d8bd53cc4p15@IL16
5.11e-66FFCP PHASE1:Hg19::chr17:36720287..36720302,-#_a441d8eedf5a6701a552659d8bd53cc4p18@SRCIN1
5.11e-66FFCP PHASE1:Hg19::chr17:50236110..50236119,-#_a441d8eedf5a6701a552659d8bd53cc4p22@CA10
5.11e-66FFCP PHASE1:Hg19::chr17:588423..588441,-#_a441d8eedf5a6701a552659d8bd53cc4p@chr17:588423..588441, -
5.11e-66FFCP PHASE1:Hg19::chr17:72667462..72667471,+#_a441d8eedf5a6701a552659d8bd53cc4p11@RAB37
5.11e-66FFCP PHASE1:Hg19::chr17:72857611..72857619,-#_a441d8eedf5a6701a552659d8bd53cc4p@chr17:72857611..72857619, -
5.11e-66FFCP PHASE1:Hg19::chr18:8783586..8783597,+#_a441d8eedf5a6701a552659d8bd53cc4p2@CCDC165
5.11e-66FFCP PHASE1:Hg19::chr18:8783637..8783650,+#_a441d8eedf5a6701a552659d8bd53cc4p@chr18:8783637..8783650, +
5.11e-66FFCP PHASE2:Hg19::chr9:135538143..135538152,-#_a441d8eedf5a6701a552659d8bd53cc4p2@CU680380
5.11e-66FFCP PHASE2:Hg19::chr20:39790925..39790940,+#_a441d8eedf5a6701a552659d8bd53cc4p@chr20:39790925..39790940, +
5.11e-66FFCP PHASE2:Hg19::chr20:45061746..45061763,-#_a441d8eedf5a6701a552659d8bd53cc4p4@ELMO2
5.11e-66FFCP PHASE1:Hg19::chr2:149835088..149835109,+#_a441d8eedf5a6701a552659d8bd53cc4p9@KIF5C
5.11e-66FFCP PHASE1:Hg19::chr3:147125238..147125275,+#_a441d8eedf5a6701a552659d8bd53cc4p@chr3:147125238..147125275, +
5.11e-66FFCP PHASE1:Hg19::chr3:98519943..98519958,-#_a441d8eedf5a6701a552659d8bd53cc4p@chr3:98519943..98519958, -
5.11e-66FFCP PHASE2:Hg19::chr3:98519943..98519958,-#_a441d8eedf5a6701a552659d8bd53cc4p@chr3:98519943..98519958, -
5.11e-66FFCP PHASE2:Hg19::chr15:79724672..79724683,+#_a441d8eedf5a6701a552659d8bd53cc4p1@KIAA1024
5.11e-66FFCP PHASE2:Hg19::chr15:81489280..81489292,+#_a441d8eedf5a6701a552659d8bd53cc4p15@IL16
5.11e-66FFCP PHASE2:Hg19::chr1:16366392..16366411,-#_a441d8eedf5a6701a552659d8bd53cc4p@chr1:16366392..16366411, -
5.11e-66FFCP PHASE2:Hg19::chr6:127533959..127533972,-#_a441d8eedf5a6701a552659d8bd53cc4p@chr6:127533959..127533972, -
5.11e-66FFCP PHASE2:Hg19::chr6:127533978..127533993,-#_a441d8eedf5a6701a552659d8bd53cc4p@chr6:127533978..127533993, -
5.11e-66FFCP PHASE2:Hg19::chr18:8783586..8783597,+#_a441d8eedf5a6701a552659d8bd53cc4p2@CCDC165
5.11e-66FFCP PHASE2:Hg19::chr18:8783637..8783650,+#_a441d8eedf5a6701a552659d8bd53cc4p@chr18:8783637..8783650, +
5.11e-66FFCP PHASE2:Hg19::chr6:34073743..34073761,-#_a441d8eedf5a6701a552659d8bd53cc4p1@GRM4
5.11e-66FFCP PHASE2:Hg19::chr6:72922614..72922626,+#_a441d8eedf5a6701a552659d8bd53cc4p19@RIMS1
5.11e-66FFCP PHASE2:Hg19::chr6:72922728..72922737,+#_a441d8eedf5a6701a552659d8bd53cc4p29@RIMS1
5.11e-66FFCP PHASE2:Hg19::chr2:149835088..149835109,+#_a441d8eedf5a6701a552659d8bd53cc4p9@KIF5C
5.11e-66FFCP PHASE2:Hg19::chr11:122733033..122733052,+#_a441d8eedf5a6701a552659d8bd53cc4p4@CRTAM
5.11e-66FFCP PHASE2:Hg19::chr11:123448159..123448170,+#_a441d8eedf5a6701a552659d8bd53cc4p4@AB384137
5.11e-66FFCP PHASE2:Hg19::chr17:36720287..36720302,-#_a441d8eedf5a6701a552659d8bd53cc4p18@SRCIN1
5.11e-66FFCP PHASE2:Hg19::chr5:161112654..161112669,+#_a441d8eedf5a6701a552659d8bd53cc4p2@GABRA6
5.11e-66FFCP PHASE2:Hg19::chr5:161112968..161112988,+#_a441d8eedf5a6701a552659d8bd53cc4p3@GABRA6
5.11e-66FFCP PHASE2:Hg19::chr17:50236110..50236119,-#_a441d8eedf5a6701a552659d8bd53cc4p22@CA10
5.11e-66FFCP PHASE2:Hg19::chr17:588423..588441,-#_a441d8eedf5a6701a552659d8bd53cc4p@chr17:588423..588441, -
5.11e-66FFCP PHASE2:Hg19::chr17:72667462..72667471,+#_a441d8eedf5a6701a552659d8bd53cc4p11@RAB37
5.11e-66FFCP PHASE2:Hg19::chr17:72857611..72857619,-#_a441d8eedf5a6701a552659d8bd53cc4p@chr17:72857611..72857619, -
5.11e-66FFCP PHASE2:Hg19::chr3:147125238..147125275,+#_a441d8eedf5a6701a552659d8bd53cc4p@chr3:147125238..147125275, +
5.11e-66FFCP PHASE2:Hg19::chr14:52168958..52169000,+#_a441d8eedf5a6701a552659d8bd53cc4p27@FRMD6
5.11e-66FFCP PHASE2:Hg19::chr14:60031159..60031181,-#_a441d8eedf5a6701a552659d8bd53cc4p1@ENST00000556936
5.11e-66FFCP PHASE2:Hg19::chr14:60049016..60049032,-#_a441d8eedf5a6701a552659d8bd53cc4p@chr14:60049016..60049032, -
5.11e-66FFCP PHASE2:Hg19::chr14:77582905..77582916,+#_a441d8eedf5a6701a552659d8bd53cc4p5@TMEM63C
5.11e-66FFCP PHASE1:Hg19::chr9:135538143..135538152,-#_a441d8eedf5a6701a552659d8bd53cc4p2@CU680380
1.63e-65FFCP PHASE1:Hg19::chr10:62149532..62149539,-#_35868b1c3bdee1baa0bb3307e28f96c8p38@ANK3
1.63e-65FFCP PHASE2:Hg19::chr10:62149532..62149539,-#_35868b1c3bdee1baa0bb3307e28f96c8p38@ANK3
2.29e-65FFCP PHASE1:Hg19::chrX:106692537..106692551,+#_909d1e3ce28b993e0b49b4f950266aeap@chrX:106692537..106692551, +
2.29e-65FFCP PHASE2:Hg19::chrX:106692537..106692551,+#_909d1e3ce28b993e0b49b4f950266aeap@chrX:106692537..106692551, +
8.77e-62FFCP PHASE1:Hg19::chr7:153445213..153445251,+#_9ac8f1ecc516e57b75f09616f474f555+, p@chr7:153445213..153445251
8.77e-62FFCP PHASE2:Hg19::chr7:153445213..153445251,+#_9ac8f1ecc516e57b75f09616f474f555p@chr7:153445213..153445251, +
9.7e-62FFCP PHASE2:Hg19::chr9:8779377..8779397,-#_10388c442398d05618e552008602f7dfp@chr9:8779377..8779397, -
9.7e-62FFCP PHASE1:Hg19::chr9:8779377..8779397,-#_10388c442398d05618e552008602f7dfp@chr9:8779377..8779397, -
2.04e-59FFCP PHASE1:Hg19::chr12:72332618..72332632,+#_d88a45b4a137dac98448fa44366eb19dp1@TPH2
2.04e-59FFCP PHASE2:Hg19::chr12:72332618..72332632,+#_d88a45b4a137dac98448fa44366eb19dp1@TPH2