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UBERON:0010259

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Name:1st arch mesenchyme from neural crest
Namespace:FANTOM
Xrefs:
links:
EMAPA:16129
Synonyms: "mesenchyme derived from neural crest of mesenchyme of 1st arch" EXACT [EMAPA:16129]

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0010042(1st arch mesenchyme),UBERON:0010258(mesenchyme from rhombencephalic neural crest),UBERON:0010359(pharyngeal arch mesenchyme from neural crest)
develops_from:UBERON:0002342(neural crest),UBERON:0003852(rhombencephalon neural crest)
part_of:UBERON:0010042(1st arch mesenchyme)



Children

is a:UBERON:0010253 (1st arch maxillary mesenchyme from neural crest)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010259 (1st arch mesenchyme from neural crest), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr17:54893192..54893195,-#_ef376105729634ca6f1ed5c3b6da6b3ep14@C17orf67
5.42e-195FFCP PHASE1:Hg19::chr17:54893192..54893195,-#_ef376105729634ca6f1ed5c3b6da6b3ep14@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr17:54893213..54893220,-#_bdbf4964c7f6063047be44e89e9e6ebfp12@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr8:57353655..57353662,-#_bdbf4964c7f6063047be44e89e9e6ebfp@chr8:57353655..57353662, -
9.37e-99FFCP PHASE2:Hg19::chr17:54893292..54893300,-#_bdbf4964c7f6063047be44e89e9e6ebfp13@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr17:54893269..54893278,-#_bdbf4964c7f6063047be44e89e9e6ebfp11@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr17:54893292..54893300,-#_bdbf4964c7f6063047be44e89e9e6ebfp13@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr17:54893213..54893220,-#_bdbf4964c7f6063047be44e89e9e6ebfp12@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr8:57353655..57353662,-#_bdbf4964c7f6063047be44e89e9e6ebfp@chr8:57353655..57353662, -
9.37e-99FFCP PHASE2:Hg19::chr17:54893269..54893278,-#_bdbf4964c7f6063047be44e89e9e6ebfp11@C17orf67
2.39e-66FFCP PHASE1:Hg19::chr4:151503647..151503656,+#_a3209e5daa4d0da189d2a65b225bcc95p14@MAB21L2
2.39e-66FFCP PHASE2:Hg19::chr4:151503647..151503656,+#_a3209e5daa4d0da189d2a65b225bcc95p14@MAB21L2
2.39e-66FFCP PHASE2:Hg19::chr5:75912402..75912418,-#_a3209e5daa4d0da189d2a65b225bcc95p@chr5:75912402..75912418, -
2.39e-66FFCP PHASE1:Hg19::chr5:75912402..75912418,-#_a3209e5daa4d0da189d2a65b225bcc95p@chr5:75912402..75912418, -
4.66e-66FFCP PHASE1:Hg19::chr4:151505582..151505614,+#_fe3aa8c4c1eedb1c8694ebed264e7188p@chr4:151505582..151505614, +
4.66e-66FFCP PHASE2:Hg19::chr4:151505582..151505614,+#_fe3aa8c4c1eedb1c8694ebed264e7188p@chr4:151505582..151505614, +
1.46e-50FFCP PHASE2:Hg19::chr3:157823323..157823328,+#_a8c6c6cf6747d6eb05ebc74c79411ec6p17@RSRC1
1.46e-50FFCP PHASE1:Hg19::chr8:57354278..57354286,+#_a8c6c6cf6747d6eb05ebc74c79411ec6p@chr8:57354278..57354286, +
1.46e-50FFCP PHASE2:Hg19::chr17:54893196..54893207,-#_a8c6c6cf6747d6eb05ebc74c79411ec6p9@C17orf67
1.46e-50FFCP PHASE1:Hg19::chr3:157823323..157823328,+#_a8c6c6cf6747d6eb05ebc74c79411ec6p17@RSRC1
1.46e-50FFCP PHASE2:Hg19::chr8:57354278..57354286,+#_a8c6c6cf6747d6eb05ebc74c79411ec6+, p@chr8:57354278..57354286
1.46e-50FFCP PHASE1:Hg19::chr17:54893196..54893207,-#_a8c6c6cf6747d6eb05ebc74c79411ec6p9@C17orf67
2.42e-50FFCP PHASE2:Hg19::chr8:57802672..57802682,-#_804fb6decbaf9e0e8fffdc6307aeebf9p@chr8:57802672..57802682, -
2.42e-50FFCP PHASE1:Hg19::chr8:57802672..57802682,-#_804fb6decbaf9e0e8fffdc6307aeebf9p@chr8:57802672..57802682, -
3.99e-50FFCP PHASE1:Hg19::chr12:85673913..85673919,+#_b5b2b3e34047ed94275435e138a1088cp7@ALX1
3.99e-50FFCP PHASE2:Hg19::chr17:76930661..76930674,+#_b5b2b3e34047ed94275435e138a1088cp1@AK123925
3.99e-50FFCP PHASE2:Hg19::chr5:75913767..75913778,-#_b5b2b3e34047ed94275435e138a1088cp@chr5:75913767..75913778, -
3.99e-50FFCP PHASE1:Hg19::chr5:75913767..75913778,-#_b5b2b3e34047ed94275435e138a1088cp@chr5:75913767..75913778, -
3.99e-50FFCP PHASE1:Hg19::chr17:76930661..76930674,+#_b5b2b3e34047ed94275435e138a1088cp1@AK123925
3.99e-50FFCP PHASE2:Hg19::chr12:85673913..85673919,+#_b5b2b3e34047ed94275435e138a1088cp7@ALX1
6.58e-50FFCP PHASE1:Hg19::chr13:28961248..28961262,-#_0cc762af859aecb4855422156ed041dap23@FLT1
6.58e-50FFCP PHASE1:Hg19::chr2:33519090..33519092,+#_0cc762af859aecb4855422156ed041dap@chr2:33519090..33519092, +
6.58e-50FFCP PHASE2:Hg19::chr2:33519090..33519092,+#_0cc762af859aecb4855422156ed041dap@chr2:33519090..33519092, +
6.58e-50FFCP PHASE2:Hg19::chr13:28961248..28961262,-#_0cc762af859aecb4855422156ed041dap23@FLT1
6.62e-41FFCP PHASE1:Hg19::chr8:57353666..57353675,-#_33f3c3af2119bf843d8df7767bd32e98p@chr8:57353666..57353675, -
6.62e-41FFCP PHASE2:Hg19::chr8:57353666..57353675,-#_33f3c3af2119bf843d8df7767bd32e98p@chr8:57353666..57353675, -
6.62e-41FFCP PHASE1:Hg19::chr8:57354143..57354152,+#_33f3c3af2119bf843d8df7767bd32e98p@chr8:57354143..57354152, +
6.62e-41FFCP PHASE1:Hg19::chr8:57353779..57353790,-#_33f3c3af2119bf843d8df7767bd32e98p@chr8:57353779..57353790, -
6.62e-41FFCP PHASE2:Hg19::chr8:57354143..57354152,+#_33f3c3af2119bf843d8df7767bd32e98p@chr8:57354143..57354152, +
6.62e-41FFCP PHASE2:Hg19::chr8:57353779..57353790,-#_33f3c3af2119bf843d8df7767bd32e98-, p@chr8:57353779..57353790
1.48e-40FFCP PHASE1:Hg19::chr1:6615391..6615401,+#_d75f0bcfa7d92ee8deaab901eaca8b1fp2@TAS1R1
1.48e-40FFCP PHASE2:Hg19::chr20:49253452..49253461,-#_d75f0bcfa7d92ee8deaab901eaca8b1fp12@FAM65C
1.48e-40FFCP PHASE1:Hg19::chr1:75600308..75600316,+#_d75f0bcfa7d92ee8deaab901eaca8b1fp8@LHX8
1.48e-40FFCP PHASE2:Hg19::chr1:6615391..6615401,+#_d75f0bcfa7d92ee8deaab901eaca8b1fp2@TAS1R1
1.48e-40FFCP PHASE1:Hg19::chr20:49253452..49253461,-#_d75f0bcfa7d92ee8deaab901eaca8b1fp12@FAM65C
1.48e-40FFCP PHASE2:Hg19::chr1:75600308..75600316,+#_d75f0bcfa7d92ee8deaab901eaca8b1fp8@LHX8
2.21e-40FFCP PHASE2:Hg19::chr5:75912831..75912842,-#_6b6003cd0a32bad4d8b1ff3ba50cd04cp@chr5:75912831..75912842, -
2.21e-40FFCP PHASE1:Hg19::chr5:75912831..75912842,-#_6b6003cd0a32bad4d8b1ff3ba50cd04cp@chr5:75912831..75912842, -
2.21e-40FFCP PHASE2:Hg19::chr16:67687543..67687559,-#_6b6003cd0a32bad4d8b1ff3ba50cd04cp@chr16:67687543..67687559, -
2.21e-40FFCP PHASE1:Hg19::chr16:67687543..67687559,-#_6b6003cd0a32bad4d8b1ff3ba50cd04cp@chr16:67687543..67687559, -
3.3e-40FFCP PHASE1:Hg19::chr6:46190219..46190230,-#_a6485e2e079fc79bad3004dc23c76445p@chr6:46190219..46190230, -
3.3e-40FFCP PHASE1:Hg19::chr9:125165007..125165016,+#_a6485e2e079fc79bad3004dc23c76445p@chr9:125165007..125165016, +
3.3e-40FFCP PHASE2:Hg19::chr6:46190219..46190230,-#_a6485e2e079fc79bad3004dc23c76445p@chr6:46190219..46190230, -
3.3e-40FFCP PHASE2:Hg19::chr9:125165007..125165016,+#_a6485e2e079fc79bad3004dc23c76445p@chr9:125165007..125165016, +
1.84e-34FFCP PHASE1:Hg19::chr4:8594472..8594473,+#_7dd13ab4ba55e4f44c846864b5f82c77p4@CPZ
1.84e-34FFCP PHASE1:Hg19::chr10:15760985..15760992,-#_7dd13ab4ba55e4f44c846864b5f82c77p@chr10:15760985..15760992, -
1.84e-34FFCP PHASE1:Hg19::chr8:57359557..57359570,-#_7dd13ab4ba55e4f44c846864b5f82c77p5@PENK
1.84e-34FFCP PHASE2:Hg19::chr8:57359557..57359570,-#_7dd13ab4ba55e4f44c846864b5f82c77p5@PENK
1.84e-34FFCP PHASE2:Hg19::chr4:8594472..8594473,+#_7dd13ab4ba55e4f44c846864b5f82c77p4@CPZ
1.84e-34FFCP PHASE2:Hg19::chr10:15760985..15760992,-#_7dd13ab4ba55e4f44c846864b5f82c77p@chr10:15760985..15760992, -
2.58e-34FFCP PHASE1:Hg19::chr14:61125018..61125037,-#_19efaa242011a718a0e7bd61b050ff14p9@SIX1
2.58e-34FFCP PHASE2:Hg19::chr14:61125018..61125037,-#_19efaa242011a718a0e7bd61b050ff14p9@SIX1
5.05e-34FFCP PHASE1:Hg19::chr6:134327986..134327991,-#_d69a7051e590b5f3fd6230e059d20678p@chr6:134327986..134327991, -
5.05e-34FFCP PHASE2:Hg19::chr6:134327986..134327991,-#_d69a7051e590b5f3fd6230e059d20678p@chr6:134327986..134327991, -
7.06e-34FFCP PHASE1:Hg19::chr13:58291223..58291226,+#_e3064a25d82b32b8f9690eb302420e6ep@chr13:58291223..58291226, +
7.06e-34FFCP PHASE2:Hg19::chr13:58291223..58291226,+#_e3064a25d82b32b8f9690eb302420e6ep@chr13:58291223..58291226, +
7.06e-34FFCP PHASE1:Hg19::chr8:57353676..57353688,-#_e3064a25d82b32b8f9690eb302420e6e-, p@chr8:57353676..57353688
7.06e-34FFCP PHASE2:Hg19::chr8:57353676..57353688,-#_e3064a25d82b32b8f9690eb302420e6ep@chr8:57353676..57353688, -
9.85e-34FFCP PHASE1:Hg19::chrX:133792540..133792551,-#_deb6d05bc958c63474676ec77611b60fp4@PLAC1
9.85e-34FFCP PHASE1:Hg19::chr5:127873659..127873667,-#_deb6d05bc958c63474676ec77611b60fp12@FBN2
9.85e-34FFCP PHASE1:Hg19::chr5:19721484..19721507,-#_deb6d05bc958c63474676ec77611b60fp@chr5:19721484..19721507, -
9.85e-34FFCP PHASE2:Hg19::chr5:127873659..127873667,-#_deb6d05bc958c63474676ec77611b60fp12@FBN2
9.85e-34FFCP PHASE2:Hg19::chrX:133792540..133792551,-#_deb6d05bc958c63474676ec77611b60fp4@PLAC1
9.85e-34FFCP PHASE2:Hg19::chr5:19721484..19721507,-#_deb6d05bc958c63474676ec77611b60f-, p@chr5:19721484..19721507
7.48e-30FFCP PHASE1:Hg19::chr8:57353804..57353821,-#_8208bcb4b4ffb8899759925754e7b2c6p@chr8:57353804..57353821, -
7.48e-30FFCP PHASE1:Hg19::chr8:57354360..57354367,+#_8208bcb4b4ffb8899759925754e7b2c6p@chr8:57354360..57354367, +
7.48e-30FFCP PHASE2:Hg19::chr8:57353804..57353821,-#_8208bcb4b4ffb8899759925754e7b2c6p@chr8:57353804..57353821, -
7.48e-30FFCP PHASE2:Hg19::chr8:57354360..57354367,+#_8208bcb4b4ffb8899759925754e7b2c6+, p@chr8:57354360..57354367
7.48e-30FFCP PHASE1:Hg19::chr8:57353982..57353991,-#_8208bcb4b4ffb8899759925754e7b2c6-, p@chr8:57353982..57353991
7.48e-30FFCP PHASE2:Hg19::chr8:57353982..57353991,-#_8208bcb4b4ffb8899759925754e7b2c6p@chr8:57353982..57353991, -
9.99e-30FFCP PHASE1:Hg19::chr3:157824322..157824334,-#_5d1689a4459f2fed4858d241ede781bfp7@SHOX2
9.99e-30FFCP PHASE2:Hg19::chr3:157824322..157824334,-#_5d1689a4459f2fed4858d241ede781bfp7@SHOX2
9.99e-30FFCP PHASE2:Hg19::chr10:15762107..15762114,-#_5d1689a4459f2fed4858d241ede781bfp10@ITGA8
9.99e-30FFCP PHASE1:Hg19::chr10:15762107..15762114,-#_5d1689a4459f2fed4858d241ede781bfp10@ITGA8
1.33e-29FFCP PHASE1:Hg19::chrX:132670143..132670152,-#_d0d5a05670a49a37c220472e05bd21afp@chrX:132670143..132670152, -
1.33e-29FFCP PHASE2:Hg19::chrX:132670143..132670152,-#_d0d5a05670a49a37c220472e05bd21afp@chrX:132670143..132670152, -
1.33e-29FFCP PHASE2:Hg19::chr17:79071218..79071221,-#_d0d5a05670a49a37c220472e05bd21afp@chr17:79071218..79071221, -
1.33e-29FFCP PHASE1:Hg19::chr17:79071218..79071221,-#_d0d5a05670a49a37c220472e05bd21afp@chr17:79071218..79071221, -
1.33e-29FFCP PHASE1:Hg19::chr22:28193943..28193956,-#_d0d5a05670a49a37c220472e05bd21afp@chr22:28193943..28193956, -
1.33e-29FFCP PHASE2:Hg19::chr22:28193943..28193956,-#_d0d5a05670a49a37c220472e05bd21afp@chr22:28193943..28193956, -
1.78e-29FFCP PHASE2:Hg19::chr1:21904551..21904569,-#_1e651e95c48328ed03228d5eabbef92ep@chr1:21904551..21904569, -
1.78e-29FFCP PHASE1:Hg19::chr1:21904551..21904569,-#_1e651e95c48328ed03228d5eabbef92ep@chr1:21904551..21904569, -
3.16e-29FFCP PHASE2:Hg19::chr1:156470861..156470868,-#_20c06c85e5b828fb360116261e2e9ac6p18@MEF2D
3.16e-29FFCP PHASE2:Hg19::chr14:89044406..89044416,+#_20c06c85e5b828fb360116261e2e9ac6p@chr14:89044406..89044416, +
3.16e-29FFCP PHASE1:Hg19::chr1:156470861..156470868,-#_20c06c85e5b828fb360116261e2e9ac6p18@MEF2D
3.16e-29FFCP PHASE1:Hg19::chr8:57359975..57359992,-#_20c06c85e5b828fb360116261e2e9ac6p@chr8:57359975..57359992, -
3.16e-29FFCP PHASE1:Hg19::chr14:89044406..89044416,+#_20c06c85e5b828fb360116261e2e9ac6p@chr14:89044406..89044416, +
3.16e-29FFCP PHASE2:Hg19::chr8:57359975..57359992,-#_20c06c85e5b828fb360116261e2e9ac6-, p@chr8:57359975..57359992
4.2e-29FFCP PHASE2:Hg19::chr13:36046127..36046134,+#_3503481c68358f87a1dedefedfa30ce3p@chr13:36046127..36046134, +
4.2e-29FFCP PHASE1:Hg19::chr15:52606315..52606320,-#_3503481c68358f87a1dedefedfa30ce3p@chr15:52606315..52606320, -