FFCP PHASE1:Hg19::chr11:32126413..32126445,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:32126413..32126445,+ | |||
|description=CAGE_peak_at_chr11:32126413..32126445,+ | |||
|id=chr11:32126413..32126445,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.88e-18!180;CL:0000548!2.17e-13!679;CL:0000004!2.17e-13!679;CL:0000255!2.17e-13!679;CL:0000012!1.00e-12!682;CL:0000057!8.60e-12!75;CL:0002321!1.25e-09!248;CL:0000144!2.02e-09!625;CL:0000220!2.41e-09!246;CL:0000222!5.78e-09!119;CL:0000680!1.43e-08!57;CL:0000056!1.43e-08!57;CL:0000355!1.43e-08!57;CL:0000393!1.63e-08!60;CL:0000211!1.63e-08!60;CL:0000187!8.06e-08!54;CL:0002371!2.60e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000723;8.86e-13;61!CL:0000134;1.43e-12;55!CL:0000048;8.16e-12;58!CL:0000034;1.12e-08;69!CL:0002539;1.19e-08;10!CL:0000569;5.34e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,6.85e-13,427;CL:0000723,2.51e-12,433;CL:0000034,1.32e-11,441;CL:0002539,1.03e-08,10;CL:0000057,1.97e-07,76;CL:0000569,3.71e-07,4;CL:0000011,3.71e-07,4;CL:0002570,6.07e-07,8;CL:0000393,8.89e-07,61;CL:0000211,8.89e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000011;5.34e-07;4 | |||
|ontology_enrichment_disease=DOID:2394!2.26e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;8.29e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.80e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!5.14e-09!83;UBERON:0002329!5.14e-09!83;UBERON:0003077!5.14e-09!83;UBERON:0003059!5.14e-09!83;UBERON:0007282!5.14e-09!83;UBERON:0009618!5.14e-09!83;UBERON:0007285!5.14e-09!83;UBERON:0003102!2.65e-08!95;UBERON:0000486!3.22e-08!82;UBERON:0004290!5.42e-08!70;UBERON:0002049!3.93e-07!79;UBERON:0007798!3.93e-07!79;UBERON:0002199!5.69e-07!45;UBERON:0002416!5.69e-07!45;UBERON:0001134!6.85e-07!61;UBERON:0002036!6.85e-07!61;UBERON:0003082!6.85e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;1.19e-08;10!UBERON:0004695;1.19e-08;10!UBERON:0002111;1.19e-08;10!UBERON:0004178;1.19e-08;10!UBERON:0001135;5.88e-08;15!UBERON:0000947;2.72e-07;21!UBERON:0010191;2.72e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,1.03e-08,10;UBERON:0004695,1.03e-08,10;UBERON:0002111,1.03e-08,10;UBERON:0004178,1.03e-08,10;UBERON:0001135,5.41e-08,15;UBERON:0004535,9.64e-08,109;UBERON:0000947,1.83e-07,21;UBERON:0010191,1.83e-07,21;UBERON:0001009,2.71e-07,112;UBERON:0004872,6.16e-07,83;UBERON:0007524,6.93e-07,73;UBERON:0002049,9.00e-07,78;UBERON:0007798,9.00e-07,78 | |||
|phase1_expression=1.81678379270557,1.92690471501885,1.26858963686374,7.00513088471913,0.446961094427288,0.872338524100369,5.06599756336621,0.631719873426831,0.783556884599516,0,0,0.218441372130172,0,0.37129905888014,0.331397375727916,3.36162573225888,4.21886169616784,1.46062018077475,3.41552959153355,0.246242116153576,0.204000691244253,0,0.572471974262113,0.410623275218653,0.376627918784408,0.229240217243854,0.164201178899891,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0.426224750532694,0,0,0.622822248995575,0,0,0,0,0,0.316462387440884,0.422510572623884,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0.534880391567015,0,0,2.01210257911091,0.511450247374121,1.0843174571537,0.50133791063589,2.75208386025565,0,1.94653948121054,1.13441780596881,2.21729397462564,0.966182642624386,0.130979075497713,0.728590576585084,0,0,0,0.132957960518865,0,0,0,0,0.860234595106124,0,0,0.419499436209906,1.10047216776027,0.208994966536811,2.06733407335463,0.71153252537342,0.33472061276467,0,0.760272105718513,1.22031028774085,0.735326160691737,1.62028389576352,0.892997282840798,0.44905874525234,0.450445921933289,1.53316637465883,0,0.549605231791222,0,0,0.436094052142534,0.496971951695318,1.39293562831038,0.264818361626438,1.72101972449288,1.41867352879343,0.560677600142307,2.1349799145941,1.48000529050296,0,1.0776853765575,1.14423332179421,0.151357427644931,1.72852777344,0.70296429550139,0.624320153660641,0.570471821544449,1.49448680551801,0.822041490506354,0.161872944368132,0.140450806702248,1.42907919878425,0.368502951935304,0.516628905878827,1.18800285728205,1.7308685049499,0,0,0.841680569770331,0.375355559615893,0,0.438977620880838,1.83892677479412,0.901428353439581,1.02088964844019,0.538168907066586,2.56268866582281,2.7551147150743,1.20036438433761,0.412210116953756,0,0.930584281657949,0.843881661206331,0.389748020644795,1.51460264546469,1.01254888506529,1.2931684545505,2.84007674013291,0.302256294682921,0.847802961552438,0.773043412653187,0.272746120590835,0.286804595389004,0.853815942907168,0.397589304964456,0.348581828608555,0.829288440122964,0.756962552626885,0.36497735907583,1.56449532329816,5.78916844373597,0,0.928735856063958,5.0531563716871,0.828147600278907,1.01150814046861,0.723033089650446,0.772057809126758,0.435758888184812,0.474541238222193,0.404493924480493,0,0.38474715694639,0,0,0,0,1.26755034821831,2.94848165003288,0,0,0.245976877086227,1.20097467208968,0,0,0.402115889646523,0.370353780634118,0.325808305310325,0,4.3299402607582,0.231860809950154,0.234817388471643,0.577465791044295,0.925971025153221,1.33177906564219,0,0,0.246217006087397,0,0,0.93733833986777,0.335964256397719,0,0.0895585227028483,0.290633938513962,0,0.492663237895943,0.088048434013226,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0.300343057843917,0.285826432630578,0,0,0.51336800074665,1.42198887333556,3.57656445851882,1.690605505112,1.32969058292435,0,0.257207374262142,0,0.266422179016099,1.42977993658148,2.17048642156577,1.64648067356154,0,1.42156779497018,0,1.50719688529793,0,0.399891964728228,0,0,2.10833939483032,0.958499421966331,0,0,2.02693829334611,0.61642896765115,0.537182889719687,0,0,0,0,0,0,0,0.167516265334349,1.27587750330633,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0.831883446123229,3.92543775353756,1.41932173530541,0.468565659970853,0,0,0,0.664225598535437,0.368738337083406,0.781952530212746,0,0,0,0,0,0,1.66435439510497,0.30239029332968,0.992431231275107,0.306923946576125,1.68396056659844,0.640695746278505,0.511707249066704,1.60853921143608,0,0.462629081407967,2.66342587969691,0.574890092096664,2.59627214591811,0.813472649219715,1.32945394550784,0.200506470303285,0.0920809889358963,2.41110341145674,1.27463817604702,2.22911505431021,0,0.385076685522074,0,1.46139224653261,0.527758144464379,0,0.340187410553031,0.431831832204279,0,0,0,0.254876273045038,0,0.671624264166535,0,0,0.512900250232778,1.31205858279882,0,0.103041011647722,0.183138929636687,0.165018999841176,0,1.30012049207304,0,0.386682873168488,0.924291702687866,0.307007349452259,0.275673144969061,1.39646318328756,1.88521702088497,1.27839941124151,0.801288320820636,0.330569830721956,0.384380134730212,0.127612712494584,0.30347334256665,2.32422774648643,1.88887408098384,1.3940745403212,1.23213432070436,0.532306030317022,0,0.55597265731176,0.286249773483982,1.116475108079,1.2655176988749,2.47819252100972,0.255897791311334,0.42793898803392,0,0.78494864019923,1.79872457583315,1.09814811894422,0.942499218765491,0,0,0.421258456238981,0.48763373908959,2.92456187557541,0,0.545999645631943,1.69686518344455,1.13008116620243,0,1.32687795048244,0,0,0.655894752046633,0.608731130888112,0.30982349809975,0.563391205064483,0.430234056612155,1.17898849215745,0.35667105148125,0.709522128141196,2.74439925886963,1.64647446479951,0.379473173765715,0.349934720244983,0.0962221127255121,0,0,0.094143800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| |||
|short_description=p@chr11:32126413..32126445,+ | |||
}} |
Latest revision as of 21:33, 23 July 2015
Short description: | p@chr11:32126413..32126445, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:32126413..32126445, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 6.85e-13 | 427 |
somatic stem cell | 2.51e-12 | 433 |
stem cell | 1.32e-11 | 441 |
aortic smooth muscle cell | 1.03e-08 | 10 |
fibroblast | 1.97e-07 | 76 |
cardiac mesenchymal cell | 3.71e-07 | 4 |
migratory trunk neural crest cell | 3.71e-07 | 4 |
mesenchymal stem cell of adipose | 6.07e-07 | 8 |
electrically responsive cell | 8.89e-07 | 61 |
electrically active cell | 8.89e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
blood vessel smooth muscle | 1.03e-08 | 10 |
arterial system smooth muscle | 1.03e-08 | 10 |
artery smooth muscle tissue | 1.03e-08 | 10 |
aorta smooth muscle tissue | 1.03e-08 | 10 |
smooth muscle tissue | 5.41e-08 | 15 |
cardiovascular system | 9.64e-08 | 109 |
aorta | 1.83e-07 | 21 |
aortic system | 1.83e-07 | 21 |
circulatory system | 2.71e-07 | 112 |
splanchnic layer of lateral plate mesoderm | 6.16e-07 | 83 |
dense mesenchyme tissue | 6.93e-07 | 73 |
vasculature | 9.00e-07 | 78 |
vascular system | 9.00e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.80e-09 | 14 |