FFCP PHASE1:Hg19::chr19:6707116..6707130,-: Difference between revisions
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|id=chr19:6707116..6707130,-
|short_description=p@chr19:6707116..6707130,-
|description=CAGE_peak_at_chr19:6707116..6707130,-
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:6707116..6707130,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr19:6707116..6707130,- | |||
|id=chr19:6707116..6707130,- | |||
|ontology_enrichment_celltype=CL:0000181!1.62e-08!12;CL:0000417!1.62e-08!12;CL:0000668!1.62e-08!12;CL:0000414!1.62e-08!12;CL:0000412!1.62e-08!12;CL:0000182!1.62e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000511;6.31e-21;1!CL:0002625;6.31e-21;1!CL:0000216;6.31e-21;1!CL:0000182;9.56e-16;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,4.22e-21,1;CL:0002625,4.22e-21,1;CL:0000216,4.22e-21,1;CL:0000182,9.56e-16,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.14e-08;11!UBERON:0009497;4.26e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.55e-14!115;UBERON:0009497!3.34e-10!25;UBERON:0000015!3.34e-10!25;UBERON:0002423!3.34e-10!25;UBERON:0006235!3.34e-10!25;UBERON:0004161!3.34e-10!25;UBERON:0002107!3.99e-10!19;UBERON:0006925!3.99e-10!19;UBERON:0008836!3.99e-10!19;UBERON:0009854!1.43e-09!23;UBERON:0002368!1.37e-08!35;UBERON:0008835!2.09e-08!22;UBERON:0003894!2.09e-08!22;UBERON:0009856!3.80e-08!26;UBERON:0000949!5.65e-08!45;UBERON:0005057!5.68e-08!26;UBERON:0002365!8.01e-08!31;UBERON:0002330!8.01e-08!31;UBERON:0004111!8.69e-08!241;UBERON:0003929!8.76e-08!54;UBERON:0000477!1.99e-07!286;UBERON:0007499!4.12e-07!25;UBERON:0002530!5.90e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.88e-26;19!UBERON:0006925;1.88e-26;19!UBERON:0001136;6.31e-21;1!UBERON:0001343;6.31e-21;1!UBERON:0004910;6.31e-21;1!UBERON:0004813;6.31e-21;1!UBERON:0002423;3.62e-20;25!UBERON:0002365;2.87e-16;31!UBERON:0002330;2.87e-16;31!UBERON:0002368;4.29e-14;33!UBERON:0006562;3.70e-11;2!UBERON:0004909;3.70e-11;2!UBERON:0000949;2.80e-10;43!UBERON:0005172;1.78e-07;52!UBERON:0005173;1.78e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.88e-26,19;UBERON:0006925,1.88e-26,19;UBERON:0008836,1.88e-26,19;UBERON:0008835,6.97e-23,22;UBERON:0003894,6.97e-23,22;UBERON:0009854,6.71e-22,23;UBERON:0001136,4.22e-21,1;UBERON:0001343,4.22e-21,1;UBERON:0004910,4.22e-21,1;UBERON:0005154,4.22e-21,1;UBERON:0005295,4.22e-21,1;UBERON:0004813,4.22e-21,1;UBERON:0005297,4.22e-21,1;UBERON:0005294,4.22e-21,1;UBERON:0010141,4.22e-21,1;UBERON:0005891,4.22e-21,1;UBERON:0007499,3.62e-20,25;UBERON:0009497,3.62e-20,25;UBERON:0000015,3.62e-20,25;UBERON:0002423,3.62e-20,25;UBERON:0006235,3.62e-20,25;UBERON:0004161,3.62e-20,25;UBERON:0009856,2.11e-19,26;UBERON:0002365,2.63e-16,31;UBERON:0002330,2.63e-16,31;UBERON:0002368,1.83e-14,35;UBERON:0000949,2.79e-11,45;UBERON:0004909,3.02e-11,2;UBERON:0003929,2.04e-09,54;UBERON:0005172,2.04e-09,54;UBERON:0005173,2.04e-09,54;UBERON:0002530,1.26e-08,59;UBERON:0002417,1.76e-08,60;UBERON:0000916,1.76e-08,60 | |||
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| ||
|short_description=p@chr19:6707116..6707130,- | |||
}} | }} |
Latest revision as of 18:15, 27 July 2015
Short description: | p@chr19:6707116..6707130, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:6707116..6707130, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 4.22e-21 | 1 |
seminiferous tubule epithelial cell | 4.22e-21 | 1 |
Sertoli cell | 4.22e-21 | 1 |
hepatocyte | 9.56e-16 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.88e-26 | 19 |
digestive gland | 1.88e-26 | 19 |
liver bud | 1.88e-26 | 19 |
hepatic diverticulum | 6.97e-23 | 22 |
liver primordium | 6.97e-23 | 22 |
digestive tract diverticulum | 6.71e-22 | 23 |
mesothelium | 4.22e-21 | 1 |
seminiferous tubule of testis | 4.22e-21 | 1 |
epithelium of male gonad | 4.22e-21 | 1 |
epithelial cord | 4.22e-21 | 1 |
sex cord | 4.22e-21 | 1 |
seminiferous tubule epithelium | 4.22e-21 | 1 |
testis sex cord | 4.22e-21 | 1 |
genital ridge | 4.22e-21 | 1 |
primitive sex cord of indifferent gonad | 4.22e-21 | 1 |
coelomic epithelium | 4.22e-21 | 1 |
epithelial sac | 3.62e-20 | 25 |
epithelium of foregut-midgut junction | 3.62e-20 | 25 |
anatomical boundary | 3.62e-20 | 25 |
hepatobiliary system | 3.62e-20 | 25 |
foregut-midgut junction | 3.62e-20 | 25 |
septum transversum | 3.62e-20 | 25 |
sac | 2.11e-19 | 26 |
exocrine gland | 2.63e-16 | 31 |
exocrine system | 2.63e-16 | 31 |
endocrine gland | 1.83e-14 | 35 |
endocrine system | 2.79e-11 | 45 |
epithelium of gonad | 3.02e-11 | 2 |
gut epithelium | 2.04e-09 | 54 |
abdomen element | 2.04e-09 | 54 |
abdominal segment element | 2.04e-09 | 54 |
gland | 1.26e-08 | 59 |
abdominal segment of trunk | 1.76e-08 | 60 |
abdomen | 1.76e-08 | 60 |