FFCP PHASE1:Hg19::chr8:119945325..119945339,-: Difference between revisions
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|id=chr8:119945325..119945339,-
|short_description=p9@TNFRSF11B
|description=CAGE_peak_9_at_TNFRSF11B_5end
|association_with_transcript=167bp_to_AF134187_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4982 | |EntrezGene=4982 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=11909 | |HGNC=11909 | ||
|TSSclassifier=strong | |||
|UniProt=O00300 | |UniProt=O00300 | ||
|association_with_transcript=167bp_to_AF134187_5end | |||
|cluster_id=chr8:119945325..119945339,- | |||
|coexpression_cluster_id=C2915 | |||
|description=CAGE_peak_9_at_TNFRSF11B_5end | |||
|id=chr8:119945325..119945339,- | |||
|ontology_enrichment_celltype=CL:0000057!2.89e-14!75;CL:0000055!8.88e-14!180;CL:0000499!6.59e-11!27;CL:0002556!5.14e-09!6;CL:0002595!4.09e-08!5;CL:0000135!5.91e-08!3;CL:0000386!5.91e-08!3;CL:0000388!5.91e-08!3;CL:0002622!4.93e-07!3;CL:0000048!5.47e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0002595;3.50e-20;5!CL:0000197;1.75e-17;6!CL:0000098;1.75e-17;6!CL:0002167;1.75e-17;6!CL:0000214;1.53e-15;3!CL:0002616;1.25e-12;1!CL:0000499;1.13e-09;28!CL:0000327;3.78e-07;15!CL:0002593;7.83e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,3.62e-20,5;CL:0000197,1.70e-17,6;CL:0000098,1.70e-17,6;CL:0002167,1.70e-17,6;CL:0000214,1.32e-15,3;CL:0002616,1.11e-12,1;CL:0000499,1.08e-09,28;CL:0000327,3.66e-07,15;CL:0002593,8.52e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!6.61e-07!5;DOID:450!6.61e-07!5;DOID:66!6.61e-07!5;DOID:423!6.61e-07!5;DOID:0080000!6.61e-07!5;DOID:11722!6.61e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:3369;1.25e-12;1!DOID:3571;2.08e-12;1!DOID:3307;6.07e-07;2!DOID:3350;7.83e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,1.25e-12,1;DOID:3571,2.20e-12,1;DOID:3307,6.80e-07,2;DOID:3350,8.06e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001637!1.40e-09!42;UBERON:0003509!1.40e-09!42;UBERON:0004572!1.40e-09!42;UBERON:0001758!5.14e-09!6;UBERON:0003672!5.14e-09!6;UBERON:0000914!8.29e-09!83;UBERON:0002329!8.29e-09!83;UBERON:0003077!8.29e-09!83;UBERON:0003059!8.29e-09!83;UBERON:0007282!8.29e-09!83;UBERON:0009618!8.29e-09!83;UBERON:0007285!8.29e-09!83;UBERON:0004573!1.25e-08!33;UBERON:0004571!1.25e-08!33;UBERON:0003834!4.09e-08!5;UBERON:0001533!4.09e-08!5;UBERON:0003102!5.64e-08!95;UBERON:0000043!5.91e-08!3;UBERON:0003513!1.68e-07!8;UBERON:0000075!2.35e-07!13;UBERON:0005944!2.35e-07!13;UBERON:0004288!2.35e-07!13;UBERON:0003089!2.35e-07!13;UBERON:0005256!6.02e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;3.50e-20;5!UBERON:0001533;3.50e-20;5!UBERON:0006915;1.53e-15;3!UBERON:0007616;1.53e-15;3!UBERON:0002217;1.53e-15;3!UBERON:0002018;1.53e-15;3!UBERON:0003513;1.33e-14;7!UBERON:0005406;6.07e-07;2!UBERON:0002456;7.83e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,3.62e-20,5;UBERON:0001533,3.62e-20,5;UBERON:0006915,1.32e-15,3;UBERON:0007616,1.32e-15,3;UBERON:0002217,1.32e-15,3;UBERON:0002018,1.32e-15,3;UBERON:0003513,1.36e-14,7;UBERON:0005406,5.73e-07,2;UBERON:0002456,8.52e-07,2 | |||
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| ||
|short_description=p9@TNFRSF11B | |||
}} | }} |
Latest revision as of 20:54, 15 September 2015
Short description: | p9@TNFRSF11B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TNFRSF11B_5end |
Coexpression cluster: | C2915_Olfactory_Fibroblast_Ewing_Synoviocyte_hepatic_Hair_Prostate |
Association with transcript: | 167bp_to_AF134187_5end |
EntrezGene: | TNFRSF11B |
HGNC: | 11909 |
UniProt: | O00300 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 3.62e-20 | 5 |
receptor cell | 1.70e-17 | 6 |
sensory epithelial cell | 1.70e-17 | 6 |
olfactory epithelial cell | 1.70e-17 | 6 |
synovial cell | 1.32e-15 | 3 |
perirenal adipocyte cell | 1.11e-12 | 1 |
stromal cell | 1.08e-09 | 28 |
extracellular matrix secreting cell | 3.66e-07 | 15 |
smooth muscle cell of the internal thoracic artery | 8.52e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 3.62e-20 | 5 |
subclavian artery | 3.62e-20 | 5 |
stratified squamous epithelium | 1.32e-15 | 3 |
layer of synovial tissue | 1.32e-15 | 3 |
synovial joint | 1.32e-15 | 3 |
synovial membrane of synovial joint | 1.32e-15 | 3 |
trunk blood vessel | 1.36e-14 | 7 |
perirenal fat | 5.73e-07 | 2 |
internal thoracic artery | 8.52e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 1.25e-12 | 1 |
liver cancer | 2.20e-12 | 1 |
teratoma | 6.80e-07 | 2 |
mesenchymal cell neoplasm | 8.06e-07 | 2 |