FFCP PHASE1:Hg19::chr1:186276857..186276868,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:186276857..186276868,+ | |||
|coexpression_cluster_id=C287 | |||
|description=CAGE_peak_at_chr1:186276857..186276868,+ | |description=CAGE_peak_at_chr1:186276857..186276868,+ | ||
|id=chr1:186276857..186276868,+ | |id=chr1:186276857..186276868,+ | ||
|ontology_enrichment_celltype=CL:0000153!1.21e-18!9;CL:0000447!1.21e-18!9;CL:0000327!7.11e-15!14;CL:0000667!7.23e-15!6;CL:0000058!7.23e-15!6;CL:0000138!7.23e-15!6;CL:0000499!7.31e-09!27;CL:0002549!1.90e-07!2 | |ontology_enrichment_celltype=CL:0000153!1.21e-18!9;CL:0000447!1.21e-18!9;CL:0000327!7.11e-15!14;CL:0000667!7.23e-15!6;CL:0000058!7.23e-15!6;CL:0000138!7.23e-15!6;CL:0000499!7.31e-09!27;CL:0002549!1.90e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000153;6.75e-47;9!CL:0000447;6.75e-47;9!CL:0000138;1.18e-36;6!CL:0000327;6.70e-28;15!CL:0000499;6.27e-19;28!CL:0000214;1.68e-12;3!CL:0000151;3.59e-09;36!CL:0000182;3.14e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,8.02e-47,9;CL:0000447,8.02e-47,9;CL:0000058,1.77e-36,6;CL:0000138,1.77e-36,6;CL:0000327,7.41e-28,15;CL:0000499,6.43e-19,28;CL:0000214,1.41e-12,3;CL:0000151,3.40e-11,36;CL:0000182,2.91e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0010227;4.64e-10;1 | |||
|ontology_enrichment_disease=DOID:114!1.37e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003947!1.90e-07!2;UBERON:0005629!1.90e-07!2;UBERON:0005358!1.90e-07!2;UBERON:0001886!1.90e-07!2;UBERON:0004086!1.90e-07!2;UBERON:0005282!1.90e-07!2;UBERON:0005281!1.90e-07!2;UBERON:0001443!2.83e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;1.68e-12;3!UBERON:0007616;1.68e-12;3!UBERON:0002217;1.68e-12;3!UBERON:0002018;1.68e-12;3!UBERON:0002107;1.75e-11;19!UBERON:0006925;1.75e-11;19!UBERON:0001013;3.44e-10;14!UBERON:0002079;4.64e-10;1!UBERON:0002426;8.61e-10;1!UBERON:0003831;8.61e-10;1!UBERON:0003898;8.61e-10;1!UBERON:0004830;8.61e-10;1!UBERON:0003830;8.61e-10;1!UBERON:0005175;8.61e-10;1!UBERON:0001774;8.61e-10;1!UBERON:0001103;8.61e-10;1!UBERON:0002423;1.09e-08;25!UBERON:0002365;5.61e-07;31!UBERON:0002330;5.61e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.41e-12,3;UBERON:0007616,1.41e-12,3;UBERON:0002217,1.41e-12,3;UBERON:0002018,1.41e-12,3;UBERON:0002107,1.69e-11,19;UBERON:0006925,1.69e-11,19;UBERON:0008836,1.69e-11,19;UBERON:0001013,3.24e-10,14;UBERON:0002079,5.79e-10,1;UBERON:0008835,6.57e-10,22;UBERON:0003894,6.57e-10,22;UBERON:0002426,8.99e-10,1;UBERON:0003831,8.99e-10,1;UBERON:0003898,8.99e-10,1;UBERON:0004830,8.99e-10,1;UBERON:0003830,8.99e-10,1;UBERON:0005175,8.99e-10,1;UBERON:0001774,8.99e-10,1;UBERON:0001103,8.99e-10,1;UBERON:0010084,8.99e-10,1;UBERON:0009854,1.80e-09,23;UBERON:0007499,1.07e-08,25;UBERON:0009497,1.07e-08,25;UBERON:0000015,1.07e-08,25;UBERON:0002423,1.07e-08,25;UBERON:0006235,1.07e-08,25;UBERON:0004161,1.07e-08,25;UBERON:0009856,2.34e-08,26;UBERON:0002365,5.62e-07,31;UBERON:0002330,5.62e-07,31 | |||
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|phase1_expression=0,1.92690471501885,0,0,0,0,0,8.2123583545488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.260118695119756,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1686349143074,1.00267582127178,5.93870727739377,7.15757352345989,12.1658717575659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,12.6755034821831,4.91413608338813,2.95394953340702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0.308097234229289,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,1.89996871767898,3.95153871551882,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.798716001995964,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1440859791201,0,0,0,0,0,0,0,0,0,4.39656701034247,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,2.23882204330311,0,2.77402930751307,0,0.251567901752575,3.55924488638614,0,0.151230923763239,2.17612080815893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84870251452567,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p@chr1:186276857..186276868,+ | |short_description=p@chr1:186276857..186276868,+ | ||
}} | }} |
Latest revision as of 01:30, 28 July 2015
Short description: | p@chr1:186276857..186276868, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:186276857..186276868, + |
Coexpression cluster: | C287_Hepatocyte_Chondrocyte_Adipocyte_Synoviocyte_liver_tenocyte_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 8.02e-47 | 9 |
carbohydrate secreting cell | 8.02e-47 | 9 |
chondroblast | 1.77e-36 | 6 |
chondrocyte | 1.77e-36 | 6 |
extracellular matrix secreting cell | 7.41e-28 | 15 |
stromal cell | 6.43e-19 | 28 |
synovial cell | 1.41e-12 | 3 |
secretory cell | 3.40e-11 | 36 |
hepatocyte | 2.91e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 1.41e-12 | 3 |
layer of synovial tissue | 1.41e-12 | 3 |
synovial joint | 1.41e-12 | 3 |
synovial membrane of synovial joint | 1.41e-12 | 3 |
liver | 1.69e-11 | 19 |
digestive gland | 1.69e-11 | 19 |
liver bud | 1.69e-11 | 19 |
adipose tissue | 3.24e-10 | 14 |
left cardiac atrium | 5.79e-10 | 1 |
hepatic diverticulum | 6.57e-10 | 22 |
liver primordium | 6.57e-10 | 22 |
chest muscle | 8.99e-10 | 1 |
respiratory system muscle | 8.99e-10 | 1 |
skeletal muscle of trunk | 8.99e-10 | 1 |
respiratory system skeletal muscle | 8.99e-10 | 1 |
thoracic segment muscle | 8.99e-10 | 1 |
chest organ | 8.99e-10 | 1 |
muscle of trunk | 8.99e-10 | 1 |
diaphragm | 8.99e-10 | 1 |
future diaphragm | 8.99e-10 | 1 |
digestive tract diverticulum | 1.80e-09 | 23 |
epithelial sac | 1.07e-08 | 25 |
epithelium of foregut-midgut junction | 1.07e-08 | 25 |
anatomical boundary | 1.07e-08 | 25 |
hepatobiliary system | 1.07e-08 | 25 |
foregut-midgut junction | 1.07e-08 | 25 |
septum transversum | 1.07e-08 | 25 |
sac | 2.34e-08 | 26 |
exocrine gland | 5.62e-07 | 31 |
exocrine system | 5.62e-07 | 31 |