FFCP PHASE1:Hg19::chr1:203317215..203317230,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C546 | |||
|description=CAGE_peak_at_chr1:203317215..203317230,+ | |||
|id=chr1:203317215..203317230,+ | |||
|ontology_enrichment_celltype=CL:0000136!1.32e-10!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.42e-31;13!CL:0002615;3.43e-14;3!CL:0000327;2.27e-13;15!CL:0000153;3.45e-12;9!CL:0000447;3.45e-12;9!CL:0002617;2.48e-09;2!CL:0000499;1.15e-08;28!CL:0000138;4.31e-07;6!CL:0000214;5.02e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.46e-27,15;CL:0002615,2.53e-14,3;CL:0000327,2.61e-13,15;CL:0000153,3.31e-12,9;CL:0000447,3.31e-12,9;CL:0002617,4.71e-09,2;CL:0000499,1.10e-08,28;CL:0000058,4.41e-07,6;CL:0000138,4.41e-07,6;CL:0000214,4.60e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.97e-15!115;UBERON:0007100!3.09e-07!27;UBERON:0004457!6.08e-07!12;UBERON:0000042!6.08e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.96e-23;9!UBERON:0000042;2.96e-23;9!UBERON:0003688;4.16e-18;6!UBERON:0002358;4.16e-18;6!UBERON:0003684;4.16e-18;6!UBERON:0001178;4.16e-18;6!UBERON:0006915;5.02e-07;3!UBERON:0007616;5.02e-07;3!UBERON:0002217;5.02e-07;3!UBERON:0002018;5.02e-07;3!UBERON:0003978;7.45e-07;3!UBERON:0000946;7.45e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.20e-18,6;UBERON:0002358,5.20e-18,6;UBERON:0003684,5.20e-18,6;UBERON:0001178,5.20e-18,6;UBERON:0004457,3.64e-17,12;UBERON:0000042,3.64e-17,12;UBERON:0004458,3.87e-07,49;UBERON:0006915,4.60e-07,3;UBERON:0007616,4.60e-07,3;UBERON:0002217,4.60e-07,3;UBERON:0002018,4.60e-07,3;UBERON:0003978,8.03e-07,3;UBERON:0009751,8.03e-07,3;UBERON:0000946,8.03e-07,3;UBERON:0002523,8.03e-07,3;UBERON:0005983,8.03e-07,3;UBERON:0002165,8.03e-07,3;UBERON:0002062,8.03e-07,3;UBERON:0007280,8.03e-07,3 | |||
|phase1_expression=1.09007027562334,1.2846031433459,1.69145284915165,3.00219895059391,8.04529969969118,1.74467704820074,2.53299878168311,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.895037932904712,1.44575660953827,0.50133791063589,1.44846518960824,0,22.8718389042239,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.993943903390637,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,1.35214253015937,0.113432183160021,0,0,0.211931901159562,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0,2.29723871668228,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.356857977594324,0.788512075169673,1.17141414992713,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0.767309866440312,0.280660094433074,1.02511319404561,0,1.44768529029247,0,0,0.177561725313127,0,0,0,0,0,0,0.229628896329213,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.38126038784765,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,1.9676842561399,0,0,0,0,0,0,0,3.37772216476263,2.63435914367922,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,6.77443160053637,0,0,0,0,0.622079175323615,0,0,0,0.591860433821602,0,0,0,0,0,0,0.0874599999961957,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,1.00035336054936,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0.265372693510018,0,0,0,0,0,6.42062117839031,0,0,0,0,0.394584402849391,4.83962864194656,0,1.64285107034069,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,2.03382666702479,0,0,0,0,0,3.20179492109029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.26134243307861,1.3749625440701,0.717873024576814,0.199679000498991,0,0.446342914883745,0.268733889946905,1.08089965062721,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.209818352539992,0,0,0,2.85878130549347,0.662091970365432,0,0.542999601753713,0.864221491201268,0,0,0,0,0,0.293104467356165,0,0.129282956361551,0,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0.197611631897944,0,0,1.63205341010842,0,1.83807346058077,1.63936315354902,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.378806010550178,0.251567901752575,0,0.228840068396924,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0.155262956876259,0.414706207840855,0,0,0.751288044986092,0.761610424337591,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0,0,0.245772908753719,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0.994581110581374,0.752103283492572,0.20170506870352,1.56302802246618,0,0,0,0,0,0,0.0634158101939068,0,0.548257766857182,0.992422356778588,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0,0,0.313972371402056,0,0,0.913158720509496,0,0,0.643288897589907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0,0,0,1.96118657403124,0,0.196308467114945,0,0.4226557275834,0.169927114687817,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0.0679914901909147,0,1.5870805215462,0.371995018166751,1.84870251452567,0.432626562123789,0,0,8.61549806877771,0,0,0,0,0.454672189309436,0,0,0,0.213233981900981,0.23806443146374,0,0.124149428591716,0,0.572824424503484,1.61693751166575,0.435433495793923,0.684466602170562,0.26940821205835,0.430333232356058,2.99394320891412,0,0,0,0,2.34640942403454,1.22241444182866,2.03448089157869,1.33151354837103,0.402547587182052,0 | |||
|short_description=p@chr1:203317215..203317230,+ | |||
}} |
Revision as of 23:31, 10 January 2014
Short description: | p@chr1:203317215..203317230, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:203317215..203317230, + |
Coexpression cluster: | C546_Chondrocyte_heart_mature_Adipocyte_teratocarcinoma_aorta_dura |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.46e-27 | 15 |
adipocyte of omentum tissue | 2.53e-14 | 3 |
extracellular matrix secreting cell | 2.61e-13 | 15 |
GAG secreting cell | 3.31e-12 | 9 |
carbohydrate secreting cell | 3.31e-12 | 9 |
adipocyte of breast | 4.71e-09 | 2 |
stromal cell | 1.10e-08 | 28 |
chondroblast | 4.41e-07 | 6 |
chondrocyte | 4.41e-07 | 6 |
synovial cell | 4.60e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.20e-18 | 6 |
peritoneum | 5.20e-18 | 6 |
abdominal cavity | 5.20e-18 | 6 |
visceral peritoneum | 5.20e-18 | 6 |
cavity lining | 3.64e-17 | 12 |
serous membrane | 3.64e-17 | 12 |
body cavity or lining | 3.87e-07 | 49 |
stratified squamous epithelium | 4.60e-07 | 3 |
layer of synovial tissue | 4.60e-07 | 3 |
synovial joint | 4.60e-07 | 3 |
synovial membrane of synovial joint | 4.60e-07 | 3 |
valve | 8.03e-07 | 3 |
cardiac mesenchyme | 8.03e-07 | 3 |
cardial valve | 8.03e-07 | 3 |
tunica intima | 8.03e-07 | 3 |
heart layer | 8.03e-07 | 3 |
endocardium | 8.03e-07 | 3 |
endocardial cushion | 8.03e-07 | 3 |
presumptive endocardium | 8.03e-07 | 3 |