FFCP PHASE1:Hg19::chr21:39705323..39705334,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=8bp_to_ENST00000436845_5end | |association_with_transcript=8bp_to_ENST00000436845_5end | ||
|cluster_id=chr21:39705323..39705334,- | |||
|coexpression_cluster_id=C2632 | |||
|description=CAGE_peak_2_at_ENST00000436845_5end | |description=CAGE_peak_2_at_ENST00000436845_5end | ||
|id=chr21:39705323..39705334,- | |id=chr21:39705323..39705334,- | ||
|ontology_enrichment_celltype=CL:0000135!1.94e-18!3;CL:0000386!1.94e-18!3;CL:0000388!1.94e-18!3;CL:0002564!1.61e-17!3;CL:0000153!6.92e-16!9;CL:0000447!6.92e-16!9;CL:0000188!2.29e-15!9;CL:0000499!1.35e-12!27;CL:0002602!2.35e-12!2;CL:0000327!3.99e-10!14;CL:0002540!1.56e-09!6;CL:0000667!4.64e-09!6;CL:0000058!4.64e-09!6;CL:0000138!4.64e-09!6;CL:0000214!6.94e-09!3;CL:0002582!2.42e-08!3;CL:0002242!2.99e-07!1;CL:0000228!2.99e-07!1;CL:0002372!2.99e-07!1 | |ontology_enrichment_celltype=CL:0000135!1.94e-18!3;CL:0000386!1.94e-18!3;CL:0000388!1.94e-18!3;CL:0002564!1.61e-17!3;CL:0000153!6.92e-16!9;CL:0000447!6.92e-16!9;CL:0000188!2.29e-15!9;CL:0000499!1.35e-12!27;CL:0002602!2.35e-12!2;CL:0000327!3.99e-10!14;CL:0002540!1.56e-09!6;CL:0000667!4.64e-09!6;CL:0000058!4.64e-09!6;CL:0000138!4.64e-09!6;CL:0000214!6.94e-09!3;CL:0002582!2.42e-08!3;CL:0002242!2.99e-07!1;CL:0000228!2.99e-07!1;CL:0002372!2.99e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002540;1.69e-30;6!CL:0000135;1.39e-27;3!CL:0000388;1.39e-27;3!CL:0000214;2.38e-27;3!CL:0000228;5.16e-21;1!CL:0002372;5.16e-21;1!CL:0000153;2.26e-20;9!CL:0000447;2.26e-20;9!CL:0002092;1.28e-18;10!CL:0000499;7.58e-18;28!CL:0000327;1.65e-12;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002540,1.69e-30,6;CL:0000135,1.39e-27,3;CL:0000388,1.39e-27,3;CL:0000214,2.38e-27,3;CL:0000228,5.16e-21,1;CL:0002372,5.16e-21,1;CL:0000153,2.11e-20,9;CL:0000447,2.11e-20,9;CL:0002092,1.28e-18,10;CL:0000499,7.32e-18,28;CL:0000327,1.58e-12,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004905!7.92e-19!5;UBERON:0000982!7.92e-19!5;UBERON:0004770!7.92e-19!5;UBERON:0000043!1.94e-18!3;UBERON:0002242!1.61e-17!3;UBERON:0003068!1.61e-17!3;UBERON:0002328!1.61e-17!3;UBERON:0004880!1.61e-17!3;UBERON:0009568!2.35e-12!2;UBERON:0002216!2.35e-12!2;UBERON:0002209!2.35e-12!2;UBERON:0002213!2.35e-12!2;UBERON:0004267!2.35e-12!2;UBERON:0006444!2.35e-12!2;UBERON:0001995!2.35e-12!2;UBERON:0004715!2.35e-12!2;UBERON:0001468!2.35e-12!2;UBERON:0001130!2.35e-12!2;UBERON:0001066!2.35e-12!2;UBERON:0006915!6.94e-09!3;UBERON:0002018!6.94e-09!3;UBERON:0002217!6.94e-09!3;UBERON:0007616!6.94e-09!3;UBERON:0002418!1.60e-08!3;UBERON:0004755!1.60e-08!3;UBERON:0002204!4.03e-08!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.39e-27;3!UBERON:0000043;1.39e-27;3!UBERON:0007845;1.39e-27;3!UBERON:0006915;2.38e-27;3!UBERON:0007616;2.38e-27;3!UBERON:0002217;2.38e-27;3!UBERON:0002018;2.38e-27;3!UBERON:0002371;1.23e-15;12!UBERON:0001434;5.59e-12;36!UBERON:0004905;6.61e-11;8!UBERON:0000982;6.61e-11;8!UBERON:0004770;6.61e-11;8!UBERON:0002204;9.85e-11;70!UBERON:0001474;1.20e-10;18!UBERON:0004457;8.46e-10;9!UBERON:0000042;8.46e-10;9!UBERON:0000486;1.42e-07;12!UBERON:0004765;1.49e-07;26!UBERON:0002405;2.71e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.39e-27,3;UBERON:0000043,1.39e-27,3;UBERON:0007845,1.39e-27,3;UBERON:0006915,2.38e-27,3;UBERON:0007616,2.38e-27,3;UBERON:0002217,2.38e-27,3;UBERON:0002018,2.38e-27,3;UBERON:0004905,6.61e-11,8;UBERON:0000982,6.61e-11,8;UBERON:0004770,6.61e-11,8;UBERON:0004457,1.42e-07,12;UBERON:0000042,1.42e-07,12;UBERON:0002204,3.30e-07,167 | |||
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|short_description=p2@ENST00000436845 | |short_description=p2@ENST00000436845 | ||
}} | }} |
Latest revision as of 17:52, 28 July 2015
Short description: | p2@ENST00000436845 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000436845_5end |
Coexpression cluster: | C2632_Synoviocyte_mesenchymal_tenocyte_thyroid_Nucleus_Skeletal_Myoblast |
Association with transcript: | 8bp_to_ENST00000436845_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of the bone marrow | 1.69e-30 | 6 |
fibrocyte | 1.39e-27 | 3 |
tendon cell | 1.39e-27 | 3 |
synovial cell | 2.38e-27 | 3 |
multinucleate cell | 5.16e-21 | 1 |
myotube | 5.16e-21 | 1 |
GAG secreting cell | 2.11e-20 | 9 |
carbohydrate secreting cell | 2.11e-20 | 9 |
bone marrow cell | 1.28e-18 | 10 |
stromal cell | 7.32e-18 | 28 |
extracellular matrix secreting cell | 1.58e-12 | 15 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.39e-27 | 3 |
tendon | 1.39e-27 | 3 |
regular connective tissue | 1.39e-27 | 3 |
stratified squamous epithelium | 2.38e-27 | 3 |
layer of synovial tissue | 2.38e-27 | 3 |
synovial joint | 2.38e-27 | 3 |
synovial membrane of synovial joint | 2.38e-27 | 3 |
articulation | 6.61e-11 | 8 |
skeletal joint | 6.61e-11 | 8 |
articular system | 6.61e-11 | 8 |
cavity lining | 1.42e-07 | 12 |
serous membrane | 1.42e-07 | 12 |
musculoskeletal system | 3.30e-07 | 167 |