FFCP PHASE1:Mm9::chr11:59953459..59953527,+
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p5@Rai1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_5_at_Rai1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:22 |
| Association with transcript: | -56bp_to_ENSMUST00000171108, NM_001037764, uc007jfl.1, uc007jfm.1_5end |
| EntrezGene: | Rai1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@Rai1 |
|---|
0
5
10
15
20
25
30
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 8.92e-12 | 23 |
| neuroblast (sensu Vertebrata) | 8.92e-12 | 23 |
| neuron | 3.73e-11 | 33 |
| neuronal stem cell | 3.73e-11 | 33 |
| neuroblast | 3.73e-11 | 33 |
| electrically signaling cell | 3.73e-11 | 33 |
| ectodermal cell | 4.09e-10 | 44 |
| neurectodermal cell | 4.09e-10 | 44 |
| neural cell | 4.67e-10 | 43 |
| electrically responsive cell | 7.86e-08 | 39 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| central nervous system | 5.46e-26 | 73 |
| neurectoderm | 4.13e-25 | 64 |
| neural plate | 4.13e-25 | 64 |
| presumptive neural plate | 4.13e-25 | 64 |
| nervous system | 2.38e-24 | 75 |
| neural tube | 2.30e-22 | 52 |
| neural rod | 2.30e-22 | 52 |
| future spinal cord | 2.30e-22 | 52 |
| neural keel | 2.30e-22 | 52 |
| regional part of nervous system | 5.41e-22 | 54 |
Showing 1 to 10 of 31 entries
