FFCP PHASE2:Hg19::chr19:35739597..35739627,+
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Short description: | p4@LSR |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LSR_5end |
Coexpression cluster: | C1817_Alveolar_smallcell_acantholytic_Hepatocyte_squamous_liver_mesothelioma |
Association with transcript: | 38bp_to_ENST00000354900, ENST00000360798, ENST00000361790, NM_015925, NM_205834, NM_205835, uc002nyl.2, uc002nym.2, uc002nyn.2, uc002nyo.2, uc010xsr.1_5end |
EntrezGene: | LSR |
HGNC: | 29572 |
UniProt: | E9PHD4A6NDW3Q86X29Q9BT33Q9BWS2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@LSR |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelial cell | 6.71e-28 | 253 |
endodermal cell | 1.36e-13 | 58 |
endo-epithelial cell | 4.61e-13 | 42 |
kidney tubule cell | 1.51e-10 | 10 |
nephron tubule epithelial cell | 1.51e-10 | 10 |
kidney cell | 3.62e-09 | 17 |
kidney epithelial cell | 3.62e-09 | 17 |
epithelial cell of nephron | 1.27e-07 | 15 |
epithelial cell of alimentary canal | 7.00e-07 | 20 |
Showing 1 to 9 of 9 entries
Ontology term | p-value | n |
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urinary system structure | 2.38e-13 | 47 |
trunk region element | 2.81e-13 | 101 |
renal system | 7.42e-13 | 48 |
nephron tubule epithelium | 1.51e-10 | 10 |
endoderm-derived structure | 2.22e-10 | 160 |
endoderm | 2.22e-10 | 160 |
presumptive endoderm | 2.22e-10 | 160 |
abdomen element | 3.46e-10 | 54 |
abdominal segment element | 3.46e-10 | 54 |
extraembryonic membrane | 6.12e-10 | 14 |
Showing 1 to 10 of 34 entries
Ontology term | p-value | n |
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carcinoma | 3.66e-14 | 106 |
cell type cancer | 1.10e-10 | 143 |
Showing 1 to 2 of 2 entries