FFCP PHASE1:Mm9::chr3:29213647..29213656,+: Difference between revisions
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|id=chr3:29213647..29213656,+ | |id=chr3:29213647..29213656,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!3.56e-15!10;UBERON:0000411!3.56e-15!10;UBERON:0001950!3.56e-15!10;UBERON:0003056!2.78e-14!49;UBERON:0000033!5.49e-13!63;UBERON:0001049!6.93e-12!52;UBERON:0005068!6.93e-12!52;UBERON:0006241!6.93e-12!52;UBERON:0007135!6.93e-12!52;UBERON:0002346!1.11e-11!71;UBERON:0003075!1.11e-11!71;UBERON:0007284!1.11e-11!71;UBERON:0002616!1.21e-11!49;UBERON:0000955!2.91e-11!50;UBERON:0006238!2.91e-11!50;UBERON:0003080!4.77e-11!40;UBERON:0000956!1.02e-10!21;UBERON:0001869!1.02e-10!21;UBERON:0000203!1.02e-10!21;UBERON:0002619!1.33e-10!17;UBERON:0002020!2.26e-10!34;UBERON:0002780!2.89e-10!39;UBERON:0001890!2.89e-10!39;UBERON:0006240!2.89e-10!39;UBERON:0002791!3.41e-10!29;UBERON:0003528!3.41e-10!29;UBERON:0001893!3.41e-10!29;UBERON:0001017!1.81e-08!73;UBERON:0005743!1.81e-08!73;UBERON:0000073!4.95e-08!75;UBERON:0001016!4.95e-08!75;UBERON:0004121!3.13e-07!102;UBERON:0000924!3.13e-07!102;UBERON:0006601!3.13e-07!102;UBERON:0007811!3.37e-07!86;UBERON:0000025!4.82e-07!114 | |ontology_enrichment_uberon=UBERON:0002021!3.56e-15!10;UBERON:0000411!3.56e-15!10;UBERON:0001950!3.56e-15!10;UBERON:0003056!2.78e-14!49;UBERON:0000033!5.49e-13!63;UBERON:0001049!6.93e-12!52;UBERON:0005068!6.93e-12!52;UBERON:0006241!6.93e-12!52;UBERON:0007135!6.93e-12!52;UBERON:0002346!1.11e-11!71;UBERON:0003075!1.11e-11!71;UBERON:0007284!1.11e-11!71;UBERON:0002616!1.21e-11!49;UBERON:0000955!2.91e-11!50;UBERON:0006238!2.91e-11!50;UBERON:0003080!4.77e-11!40;UBERON:0000956!1.02e-10!21;UBERON:0001869!1.02e-10!21;UBERON:0000203!1.02e-10!21;UBERON:0002619!1.33e-10!17;UBERON:0002020!2.26e-10!34;UBERON:0002780!2.89e-10!39;UBERON:0001890!2.89e-10!39;UBERON:0006240!2.89e-10!39;UBERON:0002791!3.41e-10!29;UBERON:0003528!3.41e-10!29;UBERON:0001893!3.41e-10!29;UBERON:0001017!1.81e-08!73;UBERON:0005743!1.81e-08!73;UBERON:0000073!4.95e-08!75;UBERON:0001016!4.95e-08!75;UBERON:0004121!3.13e-07!102;UBERON:0000924!3.13e-07!102;UBERON:0006601!3.13e-07!102;UBERON:0007811!3.37e-07!86;UBERON:0000025!4.82e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.09e-29,10;UBERON:0000411,4.09e-29,10;UBERON:0001950,4.09e-29,10;UBERON:0002619,4.15e-17,17;UBERON:0000956,7.94e-14,21;UBERON:0001869,7.94e-14,21;UBERON:0000203,7.94e-14,21;UBERON:0003528,5.78e-10,29;UBERON:0002791,5.78e-10,29;UBERON:0001893,5.78e-10,29;UBERON:0002048,2.38e-09,14;UBERON:0000117,2.38e-09,14;UBERON:0000171,2.38e-09,14;UBERON:0000170,2.38e-09,14;UBERON:0005597,2.38e-09,14;UBERON:0000118,2.38e-09,14;UBERON:0001851,6.33e-09,1;UBERON:0005889,6.33e-09,1;UBERON:0002020,1.82e-08,34;UBERON:0005153,9.54e-08,17;UBERON:0005178,9.54e-08,17;UBERON:0005181,9.54e-08,17;UBERON:0002224,9.54e-08,17;UBERON:0000915,9.54e-08,17;UBERON:0008947,9.54e-08,17;UBERON:0003258,9.54e-08,17;UBERON:0002780,2.39e-07,39;UBERON:0001890,2.39e-07,39;UBERON:0006240,2.39e-07,39;UBERON:0003080,3.70e-07,40 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.153606533256243,0,0.0914876436024097,0.52091337055676,0,0,0.30559649555362,0,0.427115042397309,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0.484875253135222,0,0,0,0,0,0,0,0.299581278809645,0,0,0.347648640384553,1.02286182932132,0,0,0,0,0,0.210441855886474,0.650602214813519,0,0.180062129805349,0.30140963567143,0.0680364991513279,0.2562274405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0.31399745568275,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339490171550376,1.87752198630802,0.167506257441816,0,0.195133647857799,1.7339865851681,2.87904096543407,1.75400245523236,0,0,0.144649058581512,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,2.30162618253588,2.29158205375759,3.60891682921744,0.685082519770642,0.755393897389701,0.675022500231806,0.900642406448441,1.81256963593682,3.62432218226274,0.103787347584177,0.399024873401031,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.0574354689556133,0.476293691283074,0,0,0.412085900803307,0.294397840268795,0,0.177475806159338,0.238436189947321,0.436039249896986,0.0941093804153306,0,0.182927972872773,0.263069711437843,0,0.561142271657738,0.355905054372522,0,0,0,0,0,0,0,0.382576664137687,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.153606533256243,0,0.0914876436024097,0.52091337055676,0,0,0.30559649555362,0,0.427115042397309,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0.484875253135222,0,0,0,0,0,0,0,0.299581278809645,0,0,0.347648640384553,1.02286182932132,0,0,0,0,0,0.210441855886474,0.650602214813519,0,0.180062129805349,0.30140963567143,0.0680364991513279,0.2562274405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0.31399745568275,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339490171550376,1.87752198630802,0.167506257441816,0,0.195133647857799,1.7339865851681,2.87904096543407,1.75400245523236,0,0,0.144649058581512,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,2.30162618253588,2.29158205375759,3.60891682921744,0.685082519770642,0.755393897389701,0.675022500231806,0.900642406448441,1.81256963593682,3.62432218226274,0.103787347584177,0.399024873401031,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.0574354689556133,0.476293691283074,0,0,0.412085900803307,0.294397840268795,0,0.177475806159338,0.238436189947321,0.436039249896986,0.0941093804153306,0,0.182927972872773,0.263069711437843,0,0.561142271657738,0.355905054372522,0,0,0,0,0,0,0,0.382576664137687,0,0 | ||
|short_description=p@chr3:29213647..29213656,+ | |short_description=p@chr3:29213647..29213656,+ | ||
}} | }} |
Revision as of 22:55, 13 November 2012
Short description: | p@chr3:29213647..29213656, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:29213647..29213656, + |
Coexpression cluster: | MCL_coexpression_mm9:3405 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 4.09e-29 | 10 |
visual cortex | 4.09e-29 | 10 |
neocortex | 4.09e-29 | 10 |
regional part of cerebral cortex | 4.15e-17 | 17 |
cerebral cortex | 7.94e-14 | 21 |
cerebral hemisphere | 7.94e-14 | 21 |
pallium | 7.94e-14 | 21 |
brain grey matter | 5.78e-10 | 29 |
regional part of telencephalon | 5.78e-10 | 29 |
telencephalon | 5.78e-10 | 29 |
lung | 2.38e-09 | 14 |
respiratory tube | 2.38e-09 | 14 |
respiration organ | 2.38e-09 | 14 |
pair of lungs | 2.38e-09 | 14 |
lung primordium | 2.38e-09 | 14 |
lung bud | 2.38e-09 | 14 |
cortex | 6.33e-09 | 1 |
zygote cortex | 6.33e-09 | 1 |
gray matter | 1.82e-08 | 34 |
epithelial bud | 9.54e-08 | 17 |
thoracic cavity element | 9.54e-08 | 17 |
thoracic segment organ | 9.54e-08 | 17 |
thoracic cavity | 9.54e-08 | 17 |
thoracic segment of trunk | 9.54e-08 | 17 |
respiratory primordium | 9.54e-08 | 17 |
endoderm of foregut | 9.54e-08 | 17 |
regional part of forebrain | 2.39e-07 | 39 |
forebrain | 2.39e-07 | 39 |
future forebrain | 2.39e-07 | 39 |
anterior neural tube | 3.70e-07 | 40 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.