FFCP PHASE1:Mm9::chr9:7872985..7873009,-: Difference between revisions
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|id=chr9:7872985..7873009,- | |id=chr9:7872985..7873009,- | ||
|ontology_enrichment_celltype=CL:0000988!2.51e-07!32;CL:0002032!2.51e-07!32;CL:0000037!2.51e-07!32;CL:0000566!2.51e-07!32;CL:0000837!2.51e-07!32;CL:0000791!6.03e-07!9;CL:0000789!6.03e-07!9;CL:0002420!6.03e-07!9;CL:0002419!6.03e-07!9;CL:0000790!6.03e-07!9 | |ontology_enrichment_celltype=CL:0000988!2.51e-07!32;CL:0002032!2.51e-07!32;CL:0000037!2.51e-07!32;CL:0000566!2.51e-07!32;CL:0000837!2.51e-07!32;CL:0000791!6.03e-07!9;CL:0000789!6.03e-07!9;CL:0002420!6.03e-07!9;CL:0002419!6.03e-07!9;CL:0000790!6.03e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.75e-09,32;CL:0002032,2.75e-09,32;CL:0000037,2.75e-09,32;CL:0000837,2.75e-09,32;CL:0000791,1.68e-08,9;CL:0000789,1.68e-08,9;CL:0002420,1.68e-08,9;CL:0002419,1.68e-08,9;CL:0000790,1.68e-08,9;CL:0000624,9.14e-08,8;CL:0002320,3.93e-07,46;CL:0000134,3.93e-07,46;CL:0000838,4.46e-07,12;CL:0002031,8.41e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!6.03e-13!193;UBERON:0004120!6.03e-13!193;UBERON:0006603!6.03e-13!193;UBERON:0003081!3.69e-12!88;UBERON:0002193!4.06e-11!48;UBERON:0002390!5.47e-11!45;UBERON:0003061!5.47e-11!45;UBERON:0002405!1.27e-10!70;UBERON:0003104!2.03e-10!131;UBERON:0009142!2.03e-10!131;UBERON:0001004!2.24e-08!42;UBERON:0000065!5.79e-08!41;UBERON:0002204!9.79e-08!32;UBERON:0000077!1.07e-07!97;UBERON:0004177!2.68e-07!29;UBERON:0000072!4.02e-07!27;UBERON:0001041!6.80e-07!92;UBERON:0005057!9.29e-07!51 | |ontology_enrichment_uberon=UBERON:0000926!6.03e-13!193;UBERON:0004120!6.03e-13!193;UBERON:0006603!6.03e-13!193;UBERON:0003081!3.69e-12!88;UBERON:0002193!4.06e-11!48;UBERON:0002390!5.47e-11!45;UBERON:0003061!5.47e-11!45;UBERON:0002405!1.27e-10!70;UBERON:0003104!2.03e-10!131;UBERON:0009142!2.03e-10!131;UBERON:0001004!2.24e-08!42;UBERON:0000065!5.79e-08!41;UBERON:0002204!9.79e-08!32;UBERON:0000077!1.07e-07!97;UBERON:0004177!2.68e-07!29;UBERON:0000072!4.02e-07!27;UBERON:0001041!6.80e-07!92;UBERON:0005057!9.29e-07!51 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.45e-12,48;UBERON:0002405,1.45e-12,48;UBERON:0002390,2.52e-12,45;UBERON:0003061,2.52e-12,45;UBERON:0003081,4.77e-11,87;UBERON:0000926,1.51e-10,120;UBERON:0004120,1.51e-10,120;UBERON:0006603,1.51e-10,120;UBERON:0000077,5.95e-10,35;UBERON:0001004,7.62e-10,42;UBERON:0000065,2.53e-09,41;UBERON:0002204,8.55e-09,32;UBERON:0004177,1.22e-08,29;UBERON:0005057,1.22e-08,29;UBERON:0000072,5.53e-08,27;UBERON:0001041,7.65e-08,80;UBERON:0003408,1.09e-07,24;UBERON:0002370,3.75e-07,23;UBERON:0000974,3.75e-07,23;UBERON:0004807,3.75e-07,23;UBERON:0005058,3.75e-07,23;UBERON:0003351,3.75e-07,23;UBERON:0009113,3.75e-07,23;UBERON:0003295,3.75e-07,23;UBERON:0009722,3.75e-07,23;UBERON:0005562,3.75e-07,23;UBERON:0007690,3.75e-07,23;UBERON:0002384,3.93e-07,46;UBERON:0000490,5.97e-07,66 | |||
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|short_description=p4@Birc3 | |short_description=p4@Birc3 | ||
}} | }} |
Revision as of 17:15, 14 November 2012
Short description: | p4@Birc3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Birc3_5end |
Coexpression cluster: | MCL_coexpression_mm9:66 |
Association with transcript: | -2bp_to_ENSMUST00000115672_5end |
EntrezGene: | Birc3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.75e-09 | 32 |
hematopoietic oligopotent progenitor cell | 2.75e-09 | 32 |
hematopoietic stem cell | 2.75e-09 | 32 |
hematopoietic multipotent progenitor cell | 2.75e-09 | 32 |
mature alpha-beta T cell | 1.68e-08 | 9 |
alpha-beta T cell | 1.68e-08 | 9 |
immature T cell | 1.68e-08 | 9 |
mature T cell | 1.68e-08 | 9 |
immature alpha-beta T cell | 1.68e-08 | 9 |
CD4-positive, alpha-beta T cell | 9.14e-08 | 8 |
connective tissue cell | 3.93e-07 | 46 |
mesenchymal cell | 3.93e-07 | 46 |
lymphoid lineage restricted progenitor cell | 4.46e-07 | 12 |
hematopoietic lineage restricted progenitor cell | 8.41e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.45e-12 | 48 |
immune system | 1.45e-12 | 48 |
hematopoietic system | 2.52e-12 | 45 |
blood island | 2.52e-12 | 45 |
lateral plate mesoderm | 4.77e-11 | 87 |
mesoderm | 1.51e-10 | 120 |
mesoderm-derived structure | 1.51e-10 | 120 |
presumptive mesoderm | 1.51e-10 | 120 |
mixed endoderm/mesoderm-derived structure | 5.95e-10 | 35 |
respiratory system | 7.62e-10 | 42 |
respiratory tract | 2.53e-09 | 41 |
musculoskeletal system | 8.55e-09 | 32 |
hemopoietic organ | 1.22e-08 | 29 |
immune organ | 1.22e-08 | 29 |
segment of respiratory tract | 5.53e-08 | 27 |
foregut | 7.65e-08 | 80 |
gland of gut | 1.09e-07 | 24 |
thymus | 3.75e-07 | 23 |
neck | 3.75e-07 | 23 |
respiratory system epithelium | 3.75e-07 | 23 |
hemolymphoid system gland | 3.75e-07 | 23 |
pharyngeal epithelium | 3.75e-07 | 23 |
thymic region | 3.75e-07 | 23 |
pharyngeal gland | 3.75e-07 | 23 |
entire pharyngeal arch endoderm | 3.75e-07 | 23 |
thymus primordium | 3.75e-07 | 23 |
early pharyngeal endoderm | 3.75e-07 | 23 |
connective tissue | 3.93e-07 | 46 |
unilaminar epithelium | 5.97e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.