FFCP PHASE1:Mm9::chr13:14155535..14155545,-: Difference between revisions
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|id=chr13:14155535..14155545,- | |id=chr13:14155535..14155545,- | ||
|ontology_enrichment_celltype=CL:0000144!2.02e-17!121;CL:0000012!2.02e-17!121;CL:0002371!5.69e-17!118;CL:0000548!3.99e-16!115;CL:0000004!3.99e-16!115;CL:0000255!3.99e-16!115;CL:0002321!4.43e-12!70;CL:0000220!4.43e-12!70;CL:0000034!1.46e-10!97;CL:0000055!3.54e-10!50;CL:0000723!1.96e-09!91;CL:0000048!1.96e-09!91;CL:0000393!1.82e-08!39;CL:0000211!1.82e-08!39;CL:0000239!9.44e-08!6;CL:0000677!9.44e-08!6;CL:0000212!9.44e-08!6;CL:0000584!9.44e-08!6;CL:0000355!3.29e-07!9;CL:0000680!3.35e-07!6;CL:0000183!3.35e-07!6;CL:0000187!3.35e-07!6;CL:0000056!3.35e-07!6 | |ontology_enrichment_celltype=CL:0000144!2.02e-17!121;CL:0000012!2.02e-17!121;CL:0002371!5.69e-17!118;CL:0000548!3.99e-16!115;CL:0000004!3.99e-16!115;CL:0000255!3.99e-16!115;CL:0002321!4.43e-12!70;CL:0000220!4.43e-12!70;CL:0000034!1.46e-10!97;CL:0000055!3.54e-10!50;CL:0000723!1.96e-09!91;CL:0000048!1.96e-09!91;CL:0000393!1.82e-08!39;CL:0000211!1.82e-08!39;CL:0000239!9.44e-08!6;CL:0000677!9.44e-08!6;CL:0000212!9.44e-08!6;CL:0000584!9.44e-08!6;CL:0000355!3.29e-07!9;CL:0000680!3.35e-07!6;CL:0000183!3.35e-07!6;CL:0000187!3.35e-07!6;CL:0000056!3.35e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.70e-17,6;CL:0000677,4.70e-17,6;CL:0000584,4.70e-17,6;CL:0000680,1.11e-15,6;CL:0000187,1.11e-15,6;CL:0000056,1.11e-15,6;CL:0000075,1.65e-14,7;CL:0000222,2.40e-13,7;CL:0000066,2.45e-11,25;CL:0002563,4.12e-11,9;CL:0002251,4.12e-11,9;CL:0000355,3.16e-10,9;CL:0000682,6.51e-09,3;CL:0000192,8.29e-09,3;CL:0000359,8.29e-09,3;CL:0002539,8.29e-09,3;CL:0000514,8.29e-09,3;CL:0002494,1.70e-08,3;CL:0000737,1.70e-08,3;CL:0000746,1.70e-08,3;CL:0000513,1.70e-08,3;CL:0002076,1.96e-08,15;CL:0000223,1.05e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!8.00e-11!15;UBERON:0004923!3.91e-09!24;UBERON:0001242!7.15e-09!13;UBERON:0000060!7.15e-09!13;UBERON:0001262!7.15e-09!13;UBERON:0004786!7.15e-09!13;UBERON:0000383!1.39e-07!10;UBERON:0001134!3.29e-07!9;UBERON:0002036!3.29e-07!9;UBERON:0002385!3.29e-07!9;UBERON:0000486!3.29e-07!9;UBERON:0001015!3.29e-07!9;UBERON:0004290!3.29e-07!9;UBERON:0003082!3.29e-07!9;UBERON:0000010!4.66e-07!11 | |ontology_enrichment_uberon=UBERON:0000344!8.00e-11!15;UBERON:0004923!3.91e-09!24;UBERON:0001242!7.15e-09!13;UBERON:0000060!7.15e-09!13;UBERON:0001262!7.15e-09!13;UBERON:0004786!7.15e-09!13;UBERON:0000383!1.39e-07!10;UBERON:0001134!3.29e-07!9;UBERON:0002036!3.29e-07!9;UBERON:0002385!3.29e-07!9;UBERON:0000486!3.29e-07!9;UBERON:0001015!3.29e-07!9;UBERON:0004290!3.29e-07!9;UBERON:0003082!3.29e-07!9;UBERON:0000010!4.66e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.98e-20,15;UBERON:0001242,8.69e-16,13;UBERON:0001262,8.69e-16,13;UBERON:0004786,8.69e-16,13;UBERON:0004923,5.32e-14,24;UBERON:0003350,4.12e-11,9;UBERON:0004808,4.12e-11,9;UBERON:0001277,4.12e-11,9;UBERON:0001134,3.16e-10,9;UBERON:0002036,3.16e-10,9;UBERON:0002385,3.16e-10,9;UBERON:0000486,3.16e-10,9;UBERON:0007503,3.16e-10,9;UBERON:0001015,3.16e-10,9;UBERON:0002329,3.16e-10,9;UBERON:0003082,3.16e-10,9;UBERON:0003059,3.16e-10,9;UBERON:0007282,3.16e-10,9;UBERON:0004290,3.16e-10,9;UBERON:0009618,3.16e-10,9;UBERON:0000383,3.92e-09,10;UBERON:0000485,6.00e-09,11;UBERON:0001135,8.29e-09,3;UBERON:0004237,8.29e-09,3;UBERON:0004695,8.29e-09,3;UBERON:0002111,8.29e-09,3;UBERON:0004178,8.29e-09,3;UBERON:0007524,3.07e-08,11;UBERON:0003077,3.07e-08,11;UBERON:0007285,3.07e-08,11;UBERON:0000331,4.07e-08,3;UBERON:0002116,4.07e-08,3;UBERON:0001204,4.07e-08,3;UBERON:0001168,4.07e-08,3;UBERON:0000490,4.19e-08,66;UBERON:0000160,5.65e-07,31 | |||
|phase1_expression=0.160148847104794,4.18770489167233,3.18499467572675,4.83942738090928,7.01254021924886,3.86122325397347,2.80335168714631,2.45334314538995,0.422366166455,7.72412936862578,0,1.03703806693937,0,1.39872643870396,0,0.202475267389826,0,0.157731082679119,0,0,0.680346321208558,0,0,3.67982572424835,3.21172993494038,2.8711598205751,2.58457197695445,3.66301095566011,2.66032787238923,1.26015064879965,1.55211357458713,0.635030673459631,0,0,0,0,0.204169356262369,0.837063261473815,0,0.523523743973798,0,0,0,2.39203954153597,2.83855407414641,3.67093504323363,0,0,0.219686182734472,0.58328969722285,0.139986421625363,0,0.335565212115473,0,0,5.14518872071894,1.14613375975503,2.57836046138721,0,0,0,0,0.889294796111139,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0.311068836925433,0.270011876663381,0.420649922702764,0,0.441737081903227,0.61245399607477,0.191690942036473,0,0,0.127687338085188,0.153606533256243,0.395658863190582,0.0914876436024097,0,0,0,0,0,0.284743361598206,0,1.21161909333094,1.51143120213571,0,0,1.3599426674155,0,0,0,0.842666520790511,1.36344258062446,1.29893002301434,0.35333957451034,0,0,2.54805239706646,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0.660837565967596,1.85115396664481,0.213288250535234,0,0,0,0,0,0,0.164698954724011,0,0,0.38992817423824,0,0,0.398282546508734,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,1.63934945376675,0.252470927204373,0.631016438832513,0.780877488593277,0.861693590931196,0.716906393857656,0.222798674082394,0,0.404810701674894,0.876767573733936,0.790575555893047,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,1.0591603543191,0,0,0,0,0.119372344003136,0.328281799490123,0,0,0,0.412773735926445,0,0,0.136694227721025,0,0.169978429993855,0.139951452323658,0,0,0,0,0,0.209088296014469,0,0,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,0,0,0.897138566094757,1.17519231454855,0,0.93841237725591,0.549454872801795,0,0,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0.160148847104794,4.18770489167233,3.18499467572675,4.83942738090928,7.01254021924886,3.86122325397347,2.80335168714631,2.45334314538995,0.422366166455,7.72412936862578,0,1.03703806693937,0,1.39872643870396,0,0.202475267389826,0,0.157731082679119,0,0,0.680346321208558,0,0,3.67982572424835,3.21172993494038,2.8711598205751,2.58457197695445,3.66301095566011,2.66032787238923,1.26015064879965,1.55211357458713,0.635030673459631,0,0,0,0,0.204169356262369,0.837063261473815,0,0.523523743973798,0,0,0,2.39203954153597,2.83855407414641,3.67093504323363,0,0,0.219686182734472,0.58328969722285,0.139986421625363,0,0.335565212115473,0,0,5.14518872071894,1.14613375975503,2.57836046138721,0,0,0,0,0.889294796111139,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0.311068836925433,0.270011876663381,0.420649922702764,0,0.441737081903227,0.61245399607477,0.191690942036473,0,0,0.127687338085188,0.153606533256243,0.395658863190582,0.0914876436024097,0,0,0,0,0,0.284743361598206,0,1.21161909333094,1.51143120213571,0,0,1.3599426674155,0,0,0,0.842666520790511,1.36344258062446,1.29893002301434,0.35333957451034,0,0,2.54805239706646,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0.660837565967596,1.85115396664481,0.213288250535234,0,0,0,0,0,0,0.164698954724011,0,0,0.38992817423824,0,0,0.398282546508734,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,1.63934945376675,0.252470927204373,0.631016438832513,0.780877488593277,0.861693590931196,0.716906393857656,0.222798674082394,0,0.404810701674894,0.876767573733936,0.790575555893047,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,1.0591603543191,0,0,0,0,0.119372344003136,0.328281799490123,0,0,0,0.412773735926445,0,0,0.136694227721025,0,0.169978429993855,0.139951452323658,0,0,0,0,0,0.209088296014469,0,0,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,0,0,0.897138566094757,1.17519231454855,0,0.93841237725591,0.549454872801795,0,0,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p4@Ggps1 | |short_description=p4@Ggps1 | ||
}} | }} |
Revision as of 17:46, 14 November 2012
Short description: | p4@Ggps1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ggps1_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 115bp_to_ENSMUST00000021733_5end |
EntrezGene: | Ggps1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.70e-17 | 6 |
gut absorptive cell | 4.70e-17 | 6 |
enterocyte | 4.70e-17 | 6 |
muscle precursor cell | 1.11e-15 | 6 |
muscle cell | 1.11e-15 | 6 |
myoblast | 1.11e-15 | 6 |
columnar/cuboidal epithelial cell | 1.65e-14 | 7 |
mesodermal cell | 2.40e-13 | 7 |
epithelial cell | 2.45e-11 | 25 |
intestinal epithelial cell | 4.12e-11 | 9 |
epithelial cell of alimentary canal | 4.12e-11 | 9 |
multi-potent skeletal muscle stem cell | 3.16e-10 | 9 |
M cell of gut | 6.51e-09 | 3 |
smooth muscle cell | 8.29e-09 | 3 |
vascular associated smooth muscle cell | 8.29e-09 | 3 |
aortic smooth muscle cell | 8.29e-09 | 3 |
smooth muscle myoblast | 8.29e-09 | 3 |
cardiocyte | 1.70e-08 | 3 |
striated muscle cell | 1.70e-08 | 3 |
cardiac muscle cell | 1.70e-08 | 3 |
cardiac muscle myoblast | 1.70e-08 | 3 |
endo-epithelial cell | 1.96e-08 | 15 |
endodermal cell | 1.05e-07 | 20 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.