FFCP PHASE1:Hg19::chr14:32476072..32476090,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000066!1.22e-11!254;CL:0000453!5.50e-08!5;CL:0000223!6.03e-08!59;CL:0000080!8.59e-07!6 | |ontology_enrichment_celltype=CL:0000066!1.22e-11!254;CL:0000453!5.50e-08!5;CL:0000223!6.03e-08!59;CL:0000080!8.59e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000453;1.34e-20;5!CL:0000990;6.51e-12;8!CL:0000451;6.34e-10;10 | |ontology_enrichment_celltype_v019=CL:0000453;1.34e-20;5!CL:0000990;6.51e-12;8!CL:0000451;6.34e-10;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.34e-20,5;CL:0000990,6.51e-12,8;CL:0000451,6.34e-10,10 | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.24e-08;13!UBERON:0001041;3.69e-08;30 | |ontology_enrichment_development_v019=UBERON:0009497;1.24e-08;13!UBERON:0001041;3.69e-08;30 | ||
|ontology_enrichment_disease=DOID:305!3.44e-19!106;DOID:0050687!9.80e-14!143;DOID:7!2.87e-09!39 | |ontology_enrichment_disease=DOID:305!3.44e-19!106;DOID:0050687!9.80e-14!143;DOID:7!2.87e-09!39 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004921!6.18e-12!129;UBERON:0004185!6.18e-12!129;UBERON:0001007!7.13e-11!155;UBERON:0001555!7.13e-11!155;UBERON:0007026!7.13e-11!155;UBERON:0000077!9.86e-11!130;UBERON:0005911!1.48e-10!82;UBERON:0004119!2.11e-10!169;UBERON:0000925!2.11e-10!169;UBERON:0006595!2.11e-10!169;UBERON:0003929!2.16e-10!54;UBERON:0001041!1.86e-09!98;UBERON:0005172!1.01e-08!55;UBERON:0005173!1.01e-08!55;UBERON:0009497!1.38e-08!25;UBERON:0000015!1.38e-08!25;UBERON:0002423!1.38e-08!25;UBERON:0006235!1.38e-08!25;UBERON:0004161!1.38e-08!25;UBERON:0003104!1.79e-08!238;UBERON:0009142!1.79e-08!238;UBERON:0005177!2.79e-08!107;UBERON:0008835!8.83e-08!22;UBERON:0003894!8.83e-08!22;UBERON:0002417!1.34e-07!61;UBERON:0000916!1.34e-07!61;UBERON:0009854!2.13e-07!23;UBERON:0000481!9.67e-07!347 | |ontology_enrichment_uberon=UBERON:0004921!6.18e-12!129;UBERON:0004185!6.18e-12!129;UBERON:0001007!7.13e-11!155;UBERON:0001555!7.13e-11!155;UBERON:0007026!7.13e-11!155;UBERON:0000077!9.86e-11!130;UBERON:0005911!1.48e-10!82;UBERON:0004119!2.11e-10!169;UBERON:0000925!2.11e-10!169;UBERON:0006595!2.11e-10!169;UBERON:0003929!2.16e-10!54;UBERON:0001041!1.86e-09!98;UBERON:0005172!1.01e-08!55;UBERON:0005173!1.01e-08!55;UBERON:0009497!1.38e-08!25;UBERON:0000015!1.38e-08!25;UBERON:0002423!1.38e-08!25;UBERON:0006235!1.38e-08!25;UBERON:0004161!1.38e-08!25;UBERON:0003104!1.79e-08!238;UBERON:0009142!1.79e-08!238;UBERON:0005177!2.79e-08!107;UBERON:0008835!8.83e-08!22;UBERON:0003894!8.83e-08!22;UBERON:0002417!1.34e-07!61;UBERON:0000916!1.34e-07!61;UBERON:0009854!2.13e-07!23;UBERON:0000481!9.67e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;6.19e-23;10!UBERON:0000178;1.48e-15;15!UBERON:0000179;1.48e-15;15!UBERON:0000463;1.48e-15;15!UBERON:0000478;5.48e-10;24!UBERON:0002390;1.00e-07;32!UBERON:0002394;1.31e-07;4!UBERON:0003928;1.31e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0002331;6.19e-23;10!UBERON:0000178;1.48e-15;15!UBERON:0000179;1.48e-15;15!UBERON:0000463;1.48e-15;15!UBERON:0000478;5.48e-10;24!UBERON:0002390;1.00e-07;32!UBERON:0002394;1.31e-07;4!UBERON:0003928;1.31e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,5.53e-23,10;UBERON:0000358,5.53e-23,10;UBERON:0000307,5.53e-23,10;UBERON:0000091,5.53e-23,10;UBERON:0000087,5.53e-23,10;UBERON:0007010,5.53e-23,10;UBERON:0007806,5.53e-23,10;UBERON:0008780,5.53e-23,10;UBERON:0005728,5.53e-23,10;UBERON:0000178,1.37e-15,15;UBERON:0000179,1.37e-15,15;UBERON:0000463,1.37e-15,15;UBERON:0000478,5.23e-10,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0.38474715694639,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0.0770153371044148,0,0,0.316654886678627,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,19.3342868649658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,3.55825354416746,2.34771483998355,1.98401704060365,0,0,0,0,0,0.971121518136371,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0.288180834308212,0,0,0.432164393964449,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0.26961417541674,1.08270229666224,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0.211200673038813,0.537862017998534,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0.974301544196942,1.72724292407372,1.79921933681429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0.455324382702595,0,0,0,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0.352894871715692,5.61689566824178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0.358611026963382,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0.38474715694639,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0.0770153371044148,0,0,0.316654886678627,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,19.3342868649658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,3.55825354416746,2.34771483998355,1.98401704060365,0,0,0,0,0,0.971121518136371,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0.288180834308212,0,0,0.432164393964449,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0.26961417541674,1.08270229666224,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0.211200673038813,0.537862017998534,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0.974301544196942,1.72724292407372,1.79921933681429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0.455324382702595,0,0,0,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0.352894871715692,5.61689566824178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0.358611026963382,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENST00000556949 | |short_description=p1@ENST00000556949 | ||
}} | }} |
Revision as of 02:18, 16 November 2012
Short description: | p1@ENST00000556949 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000556949_5end |
Coexpression cluster: | C326_bile_choriocarcinoma_giant_lung_mucinous_glassy_malignant |
Association with transcript: | -17bp_to_ENST00000556949_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.34e-20 | 5 |
conventional dendritic cell | 6.51e-12 | 8 |
dendritic cell | 6.34e-10 | 10 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 5.53e-23 | 10 |
blastocyst | 5.53e-23 | 10 |
blastula | 5.53e-23 | 10 |
bilaminar disc | 5.53e-23 | 10 |
inner cell mass | 5.53e-23 | 10 |
cleaving embryo | 5.53e-23 | 10 |
connecting stalk | 5.53e-23 | 10 |
inner cell mass derived epiblast | 5.53e-23 | 10 |
extraembryonic mesoderm | 5.53e-23 | 10 |
blood | 1.37e-15 | 15 |
haemolymphatic fluid | 1.37e-15 | 15 |
organism substance | 1.37e-15 | 15 |
extraembryonic structure | 5.23e-10 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.