FFCP PHASE1:Hg19::chr16:28303360..28303393,-: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002321;6.84e-18;15!CL:0000333;3.10e-15;5!CL:0002322;1.99e-14;5!CL:0000540;2.28e-08;6!CL:0000404;2.28e-08;6!CL:0002319;1.58e-07;25!CL:0000123;2.78e-07;2!CL:0000242;2.78e-07;2 | |ontology_enrichment_celltype_v019=CL:0002321;6.84e-18;15!CL:0000333;3.10e-15;5!CL:0002322;1.99e-14;5!CL:0000540;2.28e-08;6!CL:0000404;2.28e-08;6!CL:0002319;1.58e-07;25!CL:0000123;2.78e-07;2!CL:0000242;2.78e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.21e-14,5;CL:0000133,5.69e-10,59;CL:0000333,8.39e-09,41;CL:0000540,2.40e-08,6;CL:0000031,2.40e-08,6;CL:0000404,2.40e-08,6;CL:0000221,1.63e-07,72;CL:0002319,1.72e-07,25;CL:0000242,2.70e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000031;2.28e-08;6 | |ontology_enrichment_development_v019=CL:0000031;2.28e-08;6 | ||
|ontology_enrichment_disease=DOID:162!1.92e-22!235;DOID:14566!3.25e-21!239;DOID:0050687!1.59e-20!143;DOID:305!1.24e-13!106;DOID:171!1.04e-10!10;DOID:0050686!3.73e-10!137;DOID:3095!6.71e-10!22;DOID:2994!6.71e-10!22;DOID:3119!4.94e-08!14;DOID:1325!1.37e-07!7;DOID:3904!1.37e-07!7;DOID:169!1.60e-07!6;DOID:3905!9.63e-07!9 | |ontology_enrichment_disease=DOID:162!1.92e-22!235;DOID:14566!3.25e-21!239;DOID:0050687!1.59e-20!143;DOID:305!1.24e-13!106;DOID:171!1.04e-10!10;DOID:0050686!3.73e-10!137;DOID:3095!6.71e-10!22;DOID:2994!6.71e-10!22;DOID:3119!4.94e-08!14;DOID:1325!1.37e-07!7;DOID:3904!1.37e-07!7;DOID:169!1.60e-07!6;DOID:3905!9.63e-07!9 | ||
|ontology_enrichment_disease_v019=DOID:171;2.33e-18;10!DOID:169;5.02e-18;6!DOID:1325;7.46e-11;7!DOID:3904;7.46e-11;7!DOID:3095;2.08e-09;22!DOID:2994;2.08e-09;22!DOID:3905;2.39e-08;9!DOID:5409;7.94e-08;4!DOID:3119;1.80e-07;14!DOID:1324;8.71e-07;15 | |ontology_enrichment_disease_v019=DOID:171;2.33e-18;10!DOID:169;5.02e-18;6!DOID:1325;7.46e-11;7!DOID:3904;7.46e-11;7!DOID:3095;2.08e-09;22!DOID:2994;2.08e-09;22!DOID:3905;2.39e-08;9!DOID:5409;7.94e-08;4!DOID:3119;1.80e-07;14!DOID:1324;8.71e-07;15 | ||
|ontology_enrichment_disease_v019_2=DOID:171,1.60e-18,10;DOID:169,4.57e-18,6;DOID:162,3.54e-12,235;DOID:0050687,9.82e-12,143;DOID:14566,1.04e-11,239;DOID:1325,6.36e-11,7;DOID:3904,6.36e-11,7;DOID:3095,1.95e-09,22;DOID:2994,1.95e-09,22;DOID:3905,2.12e-08,9;DOID:5409,7.87e-08,4;DOID:305,1.07e-07,106;DOID:3119,1.88e-07,14;DOID:0050686,5.80e-07,137;DOID:3910,8.16e-07,2;DOID:1324,8.19e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.87e-14!94;UBERON:0001016!4.87e-14!94;UBERON:0005743!2.99e-12!86;UBERON:0001017!3.95e-12!82;UBERON:0000955!2.67e-11!69;UBERON:0006238!2.67e-11!69;UBERON:0001049!6.57e-11!57;UBERON:0005068!6.57e-11!57;UBERON:0006241!6.57e-11!57;UBERON:0007135!6.57e-11!57;UBERON:0002346!8.54e-11!90;UBERON:0001869!2.12e-09!32;UBERON:0002020!2.72e-09!34;UBERON:0003528!2.72e-09!34;UBERON:0000924!3.01e-09!173;UBERON:0006601!3.01e-09!173;UBERON:0001893!3.05e-09!34;UBERON:0000153!5.38e-09!129;UBERON:0007811!5.38e-09!129;UBERON:0003075!7.27e-09!86;UBERON:0007284!7.27e-09!86;UBERON:0002616!7.96e-09!59;UBERON:0002791!8.48e-09!33;UBERON:0002780!3.03e-08!41;UBERON:0001890!3.03e-08!41;UBERON:0006240!3.03e-08!41;UBERON:0003056!3.42e-08!61;UBERON:0000033!5.68e-08!123;UBERON:0003080!7.13e-08!42;UBERON:0004121!8.49e-08!169;UBERON:0000956!1.64e-07!25;UBERON:0000203!1.64e-07!25 | |ontology_enrichment_uberon=UBERON:0000073!4.87e-14!94;UBERON:0001016!4.87e-14!94;UBERON:0005743!2.99e-12!86;UBERON:0001017!3.95e-12!82;UBERON:0000955!2.67e-11!69;UBERON:0006238!2.67e-11!69;UBERON:0001049!6.57e-11!57;UBERON:0005068!6.57e-11!57;UBERON:0006241!6.57e-11!57;UBERON:0007135!6.57e-11!57;UBERON:0002346!8.54e-11!90;UBERON:0001869!2.12e-09!32;UBERON:0002020!2.72e-09!34;UBERON:0003528!2.72e-09!34;UBERON:0000924!3.01e-09!173;UBERON:0006601!3.01e-09!173;UBERON:0001893!3.05e-09!34;UBERON:0000153!5.38e-09!129;UBERON:0007811!5.38e-09!129;UBERON:0003075!7.27e-09!86;UBERON:0007284!7.27e-09!86;UBERON:0002616!7.96e-09!59;UBERON:0002791!8.48e-09!33;UBERON:0002780!3.03e-08!41;UBERON:0001890!3.03e-08!41;UBERON:0006240!3.03e-08!41;UBERON:0003056!3.42e-08!61;UBERON:0000033!5.68e-08!123;UBERON:0003080!7.13e-08!42;UBERON:0004121!8.49e-08!169;UBERON:0000956!1.64e-07!25;UBERON:0000203!1.64e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;3.10e-15;5!UBERON:0002410;3.10e-15;5!UBERON:0000922;3.21e-09;49!UBERON:0000010;2.78e-08;8 | |ontology_enrichment_uberon_v019=UBERON:0000013;3.10e-15;5!UBERON:0002410;3.10e-15;5!UBERON:0000922;3.21e-09;49!UBERON:0000010;2.78e-08;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.74e-15,5;UBERON:0002410,2.74e-15,5;UBERON:0000010,2.60e-08,8;UBERON:0004903,8.16e-07,2;UBERON:0002173,8.16e-07,2;UBERON:0002186,8.16e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0.246242116153576,0,0,1.14494394852423,0.684372125364421,0.376627918784408,0,0,0,0,0,0,0,0,0,2.71135202031056,1.56386155736164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.334372990781356,0.32592226663359,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0,0,0,0.296573126324121,0,1.04535523804977,0,0,0,0,0.637130828648193,0,0,0.301150238155546,0.255973222308837,1.24930726552346,0.236777252044017,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0.283604451492204,0.443458794925128,0.263504357079378,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.23486899728753,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5614478287215,2.12047629314376,2.09149097165133,2.17688215532278,1.51392510525377,3.6497735907583,0,0,0,0,0,0,0.168584690078102,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,2.6487785964879,0.245976877086227,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0.253991577168676,0,0,0,0.308482478109971,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,3.92298003977345,0,0,0,0,0,0,1.34013012267479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0.0920809889358963,0,0,0,0,0.15403067420883,0.784349769176855,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0,1.46511143709349,3.4653989966647,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0.534120355637366,0,0,0.185803175125719,1.298422916788,0.355709216742071,0.159426272728822,0,0,0,0,0,0.456469358066384,0,0,0,0.321176150207399,0,0.425846237690326,0,0,0,0,1.36771666781428,0,0,0,0,0,0.748562161632879,0,0,0.445773537109913,1.70481688083848,0,0,0,0,0.281338832821026,0,3.13127361030843,6.3337622438398,0,0,0.251932747854276,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.278304294485554,0,0,1.04951999995435,0,0.910347586283997,3.0510438035132,0.236387681767936,7.92909758455369,5.24888304089858,0.868124974666461,0.885741385813839,0.241192877250816,1.52581736317083,0.552896299656123,0,0,0.21787692703798,0.278847488557207,0,0.113942055847001,0.922255617552241,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.282706142867882,6.92443647174692,0,0.0884575645033392,0,0.889563386041866,2.34771483998355,1.8795950910982,0.202203398942031,0,0,0.182454789215666,0.978323094660449,0,0,0,2.75465485467441,0,1.80388103297391,1.24425829676697,0,0.992975867626496,0.627865836814451,0,0.569219092059585,0,0.347119476670262,0.0979923974143777,0.522355239482415,0,0.171986032471617,1.64485763191445,1.68105429298227,1.72442459811739,0,0.0882561266915003,0,0.137041924646751,0.19871461170299,0.253243183823515,0.586654148204409,0.0801588202515337,0,0.19980960958213,0.432271251462318,0.343609788497747,0,0.14405479798815,0.745515213392595,0.235694034616795,0.407712618220842,0.523014231561666,0.101998217636322,0.577901179803038,0,0.136905378891993,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0.13480708770837,0,0.76205998859206,0.795229689809303,0,3.3758161177654,6.46435352006999,6.23160507043778,0,0,0.182248669974074,1.0063040627978,0,0,0.105600336519406,0,0.383830394638891,0,0,0.5085370753095,0,0,0,0,0,0,0.113312091520126,0,0,0.646414781807753,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0.785270481251171,0,0,0.625954653532499,1.14681839138014,0.221858103073705,0.124192805882767,24.3493597487766,0.124980407962107,0.151649117541648,0,0,2.34167452903441,8.11557760220621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0.97894681802587,0,0,0.438568099157414,0,0,0,0.256241518587947,0,0,0.553033744606923,0,0,0,0.655219697692825,0,0,0,0.106691729694141,1.03328987796489,0,0.368211900503681,0,0,7.16208479300449,4.52864207866064,2.04445724412665,5.89732046236875,0.509197589862076,8.07784696386395,1.85903646388503,1.67593475391973,0,0.47317047000752,4.00285374142735,0,0,0.0642292250964595,0,0.319267718114302,0.205116364240755,2.26864526599546,0.484100767249525,0,0,1.86480665151949,1.06172751012966,0,0.346576998451015,0,0,0.795664888465099,0,0,0,0,0.163771917510097,0.295712172434091,0.337687923091973,0,0.413373593002368,0.19024743058172,2.18789923607288,0,0,0.703484977438482,0,0,0,1.21393120847326,0.682986574053893,0,0.921871900446234,0,0.475788130837822,0.328863867814245,0.472775363535873,0,0,0.314231179832004,0.280272163313789,0,0,0,0.142953088353313,4.7404083519818,0.348724276104376,0.347716544605159,0,0,0,0,0.430227358820278,0,0,0,0.68732060563215,0,0,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| ||
|short_description=p1@ENST00000501520,p1@uc002dpc.1 | |short_description=p1@ENST00000501520,p1@uc002dpc.1 | ||
}} | }} |
Revision as of 17:58, 19 November 2012
Short description: | p1@ENST00000501520, p1@uc002dpc.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000501520_5end, CAGE_peak_1_at_uc002dpc.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000501520, uc002dpc.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.21e-14 | 5 |
neurectodermal cell | 5.69e-10 | 59 |
migratory neural crest cell | 8.39e-09 | 41 |
neuron | 2.40e-08 | 6 |
neuroblast | 2.40e-08 | 6 |
electrically signaling cell | 2.40e-08 | 6 |
ectodermal cell | 1.63e-07 | 72 |
neural cell | 1.72e-07 | 25 |
Merkel cell | 2.70e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.74e-15 | 5 |
autonomic nervous system | 2.74e-15 | 5 |
peripheral nervous system | 2.60e-08 | 8 |
bronchoalveolar duct junction | 8.16e-07 | 2 |
alveolar duct | 8.16e-07 | 2 |
bronchiole | 8.16e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.60e-18 | 10 |
neuroendocrine tumor | 4.57e-18 | 6 |
cancer | 3.54e-12 | 235 |
cell type cancer | 9.82e-12 | 143 |
disease of cellular proliferation | 1.04e-11 | 239 |
bronchus cancer | 6.36e-11 | 7 |
bronchogenic carcinoma | 6.36e-11 | 7 |
germ cell and embryonal cancer | 1.95e-09 | 22 |
germ cell cancer | 1.95e-09 | 22 |
lung carcinoma | 2.12e-08 | 9 |
lung small cell carcinoma | 7.87e-08 | 4 |
carcinoma | 1.07e-07 | 106 |
gastrointestinal system cancer | 1.88e-07 | 14 |
organ system cancer | 5.80e-07 | 137 |
lung adenocarcinoma | 8.16e-07 | 2 |
lung cancer | 8.19e-07 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.