FFCP PHASE1:Hg19::chr8:55471706..55471714,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000239!2.23e-09!3;CL:1000615!2.23e-09!3;CL:0002306!2.23e-09!3;CL:0002563!3.38e-07!4 | |ontology_enrichment_celltype=CL:0000239!2.23e-09!3;CL:1000615!2.23e-09!3;CL:0002306!2.23e-09!3;CL:0002563!3.38e-07!4 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.11e-17;29!UBERON:0001041;4.34e-11;30 | |ontology_enrichment_development_v019=UBERON:0008947;2.11e-17;29!UBERON:0001041;4.34e-11;30 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4556;4.52e-08;3 | |ontology_enrichment_disease_v019=DOID:4556;4.52e-08;3 | ||
|ontology_enrichment_disease_v019_2=DOID:4556,4.52e-08,3 | |||
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|short_description=p3@RP1 | |short_description=p3@RP1 | ||
}} | }} |
Revision as of 20:45, 19 November 2012
Short description: | p3@RP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_RP1_5end |
Coexpression cluster: | C2293_large_lung_nonsmall_throat_trachea_bronchioalveolar_thyroid |
Association with transcript: | -14bp_to_ENST00000427058_5end |
EntrezGene: | RP1 |
HGNC: | 10263 |
UniProt: | E7EVW9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 4.49e-40 | 2 |
lower lobe of right lung | 2.30e-21 | 1 |
right lung lobe | 2.30e-21 | 1 |
lower lobe of lung | 2.30e-21 | 1 |
lobe of lung | 2.30e-21 | 1 |
right lung | 2.30e-21 | 1 |
lung | 5.57e-15 | 22 |
respiratory tube | 5.57e-15 | 22 |
respiration organ | 5.57e-15 | 22 |
pair of lungs | 5.57e-15 | 22 |
lung primordium | 5.57e-15 | 22 |
lung bud | 5.57e-15 | 22 |
thoracic cavity element | 6.96e-15 | 34 |
thoracic cavity | 6.96e-15 | 34 |
thoracic segment organ | 1.83e-14 | 35 |
respiratory primordium | 2.47e-13 | 38 |
endoderm of foregut | 2.47e-13 | 38 |
open tracheal system trachea | 2.47e-11 | 2 |
thoracic segment of trunk | 8.93e-10 | 52 |
respiratory tract | 2.04e-09 | 54 |
epithelial bud | 4.71e-09 | 37 |
neck | 7.66e-09 | 10 |
epithelial fold | 3.45e-07 | 47 |
respiratory system | 6.96e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 4.52e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.