FFCP PHASE1:Hg19::chr12:12635434..12635452,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000791!9.73e-31!18;CL:0000789!9.73e-31!18;CL:0002420!9.73e-31!18;CL:0002419!9.73e-31!18;CL:0000790!9.73e-31!18;CL:0000084!4.20e-21!25;CL:0000827!4.20e-21!25;CL:0000624!2.48e-18!6;CL:0000625!5.81e-17!11;CL:0000738!4.05e-13!140;CL:0000838!1.02e-12!52;CL:0000542!2.13e-12!53;CL:0000051!2.13e-12!53;CL:0002087!4.63e-11!119;CL:0000898!1.08e-10!3;CL:0000842!1.24e-09!3;CL:0000623!2.65e-09!3;CL:0000825!2.65e-09!3;CL:0000037!3.03e-09!172;CL:0000566!3.03e-09!172;CL:0000988!2.49e-08!182;CL:0000815!1.01e-07!2;CL:0000792!1.01e-07!2;CL:0002677!1.01e-07!2;CL:0002031!1.32e-07!124;CL:0002032!1.52e-07!165;CL:0000837!1.52e-07!165;CL:0000224!2.57e-07!4 | |ontology_enrichment_celltype=CL:0000791!9.73e-31!18;CL:0000789!9.73e-31!18;CL:0002420!9.73e-31!18;CL:0002419!9.73e-31!18;CL:0000790!9.73e-31!18;CL:0000084!4.20e-21!25;CL:0000827!4.20e-21!25;CL:0000624!2.48e-18!6;CL:0000625!5.81e-17!11;CL:0000738!4.05e-13!140;CL:0000838!1.02e-12!52;CL:0000542!2.13e-12!53;CL:0000051!2.13e-12!53;CL:0002087!4.63e-11!119;CL:0000898!1.08e-10!3;CL:0000842!1.24e-09!3;CL:0000623!2.65e-09!3;CL:0000825!2.65e-09!3;CL:0000037!3.03e-09!172;CL:0000566!3.03e-09!172;CL:0000988!2.49e-08!182;CL:0000815!1.01e-07!2;CL:0000792!1.01e-07!2;CL:0002677!1.01e-07!2;CL:0002031!1.32e-07!124;CL:0002032!1.52e-07!165;CL:0000837!1.52e-07!165;CL:0000224!2.57e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.10e-30;18!CL:0000789;1.10e-30;18!CL:0002419;1.10e-30;18!CL:0000898;6.51e-23;3!CL:0000625;1.85e-22;11!CL:0000084;1.01e-21;25!CL:0000815;5.55e-16;2!CL:0000792;5.55e-16;2!CL:0002677;5.55e-16;2!CL:0000624;9.76e-12;6!CL:0000895;1.10e-08;1!CL:0000542;1.11e-07;53 | |ontology_enrichment_celltype_v019=CL:0000791;1.10e-30;18!CL:0000789;1.10e-30;18!CL:0002419;1.10e-30;18!CL:0000898;6.51e-23;3!CL:0000625;1.85e-22;11!CL:0000084;1.01e-21;25!CL:0000815;5.55e-16;2!CL:0000792;5.55e-16;2!CL:0002677;5.55e-16;2!CL:0000624;9.76e-12;6!CL:0000895;1.10e-08;1!CL:0000542;1.11e-07;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.71e-31,18;CL:0000789,6.71e-31,18;CL:0002420,6.71e-31,18;CL:0002419,6.71e-31,18;CL:0000790,6.71e-31,18;CL:0000898,5.63e-23,3;CL:0000625,1.17e-22,11;CL:0000084,7.12e-22,25;CL:0000827,7.12e-22,25;CL:0000815,5.16e-16,2;CL:0000792,5.16e-16,2;CL:0002677,5.16e-16,2;CL:0000838,4.37e-12,52;CL:0000542,7.94e-12,53;CL:0000051,7.94e-12,53;CL:0000624,9.09e-12,6;CL:0000810,1.02e-08,1;CL:0000895,1.02e-08,1;CL:0002436,1.02e-08,1;CL:0002427,1.02e-08,1;CL:0002428,1.02e-08,1;CL:0002429,1.02e-08,1;CL:0002433,1.02e-08,1;CL:0002431,1.02e-08,1;CL:0002432,1.02e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000790;1.10e-30;18!CL:0002427;1.10e-08;1!CL:0000051;1.11e-07;53 | |ontology_enrichment_development_v019=CL:0000790;1.10e-30;18!CL:0002427;1.10e-08;1!CL:0000051;1.11e-07;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.36e-07!4;UBERON:0005058!2.36e-07!4;UBERON:0009113!2.36e-07!4;UBERON:0003295!2.36e-07!4;UBERON:0005562!2.36e-07!4;UBERON:0004177!8.11e-07!7 | |ontology_enrichment_uberon=UBERON:0002370!2.36e-07!4;UBERON:0005058!2.36e-07!4;UBERON:0009113!2.36e-07!4;UBERON:0003295!2.36e-07!4;UBERON:0005562!2.36e-07!4;UBERON:0004177!8.11e-07!7 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr12:12635434..12635452,+ | |short_description=p@chr12:12635434..12635452,+ | ||
}} | }} |
Revision as of 23:54, 19 November 2012
Short description: | p@chr12:12635434..12635452, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:12635434..12635452, + |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.71e-31 | 18 |
alpha-beta T cell | 6.71e-31 | 18 |
immature T cell | 6.71e-31 | 18 |
mature T cell | 6.71e-31 | 18 |
immature alpha-beta T cell | 6.71e-31 | 18 |
naive T cell | 5.63e-23 | 3 |
CD8-positive, alpha-beta T cell | 1.17e-22 | 11 |
T cell | 7.12e-22 | 25 |
pro-T cell | 7.12e-22 | 25 |
regulatory T cell | 5.16e-16 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.16e-16 | 2 |
naive regulatory T cell | 5.16e-16 | 2 |
lymphoid lineage restricted progenitor cell | 4.37e-12 | 52 |
lymphocyte | 7.94e-12 | 53 |
common lymphoid progenitor | 7.94e-12 | 53 |
CD4-positive, alpha-beta T cell | 9.09e-12 | 6 |
CD4-positive, alpha-beta thymocyte | 1.02e-08 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.02e-08 | 1 |
mature CD4 single-positive thymocyte | 1.02e-08 | 1 |
resting double-positive thymocyte | 1.02e-08 | 1 |
double-positive blast | 1.02e-08 | 1 |
CD69-positive double-positive thymocyte | 1.02e-08 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 1.02e-08 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.02e-08 | 1 |
CD24-positive, CD4 single-positive thymocyte | 1.02e-08 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.