FFCP PHASE1:Hg19::chr3:196325454..196325461,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000037!8.54e-18!172;CL:0000566!8.54e-18!172;CL:0000988!5.57e-17!182;CL:0002032!5.22e-16!165;CL:0000837!5.22e-16!165;CL:0000738!1.17e-10!140;CL:0000084!8.10e-10!25;CL:0000827!8.10e-10!25;CL:0000763!3.03e-09!112;CL:0000049!3.03e-09!112;CL:0002031!5.76e-09!124;CL:0000838!1.55e-07!52;CL:0002087!2.30e-07!119;CL:0000542!2.57e-07!53;CL:0000051!2.57e-07!53 | |ontology_enrichment_celltype=CL:0000037!8.54e-18!172;CL:0000566!8.54e-18!172;CL:0000988!5.57e-17!182;CL:0002032!5.22e-16!165;CL:0000837!5.22e-16!165;CL:0000738!1.17e-10!140;CL:0000084!8.10e-10!25;CL:0000827!8.10e-10!25;CL:0000763!3.03e-09!112;CL:0000049!3.03e-09!112;CL:0002031!5.76e-09!124;CL:0000838!1.55e-07!52;CL:0002087!2.30e-07!119;CL:0000542!2.57e-07!53;CL:0000051!2.57e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0002127;1.25e-11;1!CL:0000911;1.25e-11;1!CL:0000814;1.25e-11;1!CL:0000084;2.37e-10;25 | |ontology_enrichment_celltype_v019=CL:0002127;1.25e-11;1!CL:0000911;1.25e-11;1!CL:0000814;1.25e-11;1!CL:0000084;2.37e-10;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002127,8.64e-12,1;CL:0000914,8.64e-12,1;CL:0000911,8.64e-12,1;CL:0000814,8.64e-12,1;CL:0002042,8.64e-12,1;CL:0002039,8.64e-12,1;CL:0002040,8.64e-12,1;CL:0002041,8.64e-12,1;CL:0000084,2.33e-10,25;CL:0000827,2.33e-10,25;CL:0000037,4.26e-10,168;CL:0000988,1.77e-09,177;CL:0002032,5.46e-09,161;CL:0000837,5.46e-09,161 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1240!2.67e-14!39;DOID:2531!8.85e-14!51;DOID:0060083!8.85e-14!51;DOID:8692!2.91e-09!31 | |ontology_enrichment_disease=DOID:1240!2.67e-14!39;DOID:2531!8.85e-14!51;DOID:0060083!8.85e-14!51;DOID:8692!2.91e-09!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;3.53e-26;39!DOID:2531;1.39e-19;51!DOID:0060083;1.39e-19;51!DOID:8692;2.85e-15;31!DOID:8552;1.25e-11;1 | |ontology_enrichment_disease_v019=DOID:1240;3.53e-26;39!DOID:2531;1.39e-19;51!DOID:0060083;1.39e-19;51!DOID:8692;2.85e-15;31!DOID:8552;1.25e-11;1 | ||
|ontology_enrichment_disease_v019_2=DOID:1240,6.79e-37,39;DOID:2531,7.14e-33,51;DOID:0060083,7.14e-33,51;DOID:8692,4.86e-16,31;DOID:8552,1.07e-11,1;DOID:0050686,5.91e-11,137 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.73e-11,4;UBERON:0005058,1.73e-11,4;UBERON:0009113,1.73e-11,4;UBERON:0003295,1.73e-11,4;UBERON:0005562,1.73e-11,4;UBERON:0003351,5.95e-08,6;UBERON:0004177,6.20e-07,7;UBERON:0005057,6.20e-07,7 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0.236482229888585,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.786021525498329,0.616804496998528,0,0.32592226663359,1.4203434172042,0,0,0,0.221533894583621,0,0.128091319725675,0,0.164437904603676,0,0,0,0.267540828089713,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0.953962497221368,0.571994910780128,0,0,0,0.347140501607594,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.62194649121976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0.829312462163088,0.432359860250884,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90544744788996,0,0.431255149719035,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70740424036194,6.21762463642407,0.59873811429845,2.10655907145603,1.48171507906718,0,0,2.73881614839831,0,0,5.58662866745291,0,0.403599414382095,5.53600108997424,0,0,0,0.333698283423817,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0.197286811273867,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0,0,0,0,2.04386596391473,0,1.66211681900156,0,0,0,0,15.5757847400771,0,0.163232808159148,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,18.4897805879826,0.103688191397247,0,0,0,0,0.853828638089378,0,0,0.195984794828755,0,0,0,0.290268993867255,0.0730893170861856,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0.629063767423586,0.54604819096007,0,0.425149840203366,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0.158013611732727,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.594600453887843,0,0,0.603851374266694,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0,0,0,0,0,0,0.252332849670158,0.437062287854782,0.126698501011437,0,0,0,4.76344324655513,0.757786982182394,1.07185652062471,0,0,0,0,0.129177819672012,4.15900585782248,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr3:196325454..196325461,- | |short_description=p@chr3:196325454..196325461,- | ||
}} | }} |
Revision as of 16:40, 20 November 2012
Short description: | p@chr3:196325454..196325461, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:196325454..196325461, - |
Coexpression cluster: | C793_chronic_embryonic_spinal_medulla_pons_locus_corpus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 8.64e-12 | 1 |
immature NK T cell | 8.64e-12 | 1 |
effector T cell | 8.64e-12 | 1 |
mature NK T cell | 8.64e-12 | 1 |
immature NK T cell stage IV | 8.64e-12 | 1 |
immature NK T cell stage I | 8.64e-12 | 1 |
immature NK T cell stage II | 8.64e-12 | 1 |
immature NK T cell stage III | 8.64e-12 | 1 |
T cell | 2.33e-10 | 25 |
pro-T cell | 2.33e-10 | 25 |
hematopoietic stem cell | 4.26e-10 | 168 |
hematopoietic cell | 1.77e-09 | 177 |
hematopoietic oligopotent progenitor cell | 5.46e-09 | 161 |
hematopoietic multipotent progenitor cell | 5.46e-09 | 161 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.73e-11 | 4 |
hemolymphoid system gland | 1.73e-11 | 4 |
thymic region | 1.73e-11 | 4 |
pharyngeal gland | 1.73e-11 | 4 |
thymus primordium | 1.73e-11 | 4 |
pharyngeal epithelium | 5.95e-08 | 6 |
hemopoietic organ | 6.20e-07 | 7 |
immune organ | 6.20e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
leukemia | 6.79e-37 | 39 |
hematologic cancer | 7.14e-33 | 51 |
immune system cancer | 7.14e-33 | 51 |
myeloid leukemia | 4.86e-16 | 31 |
chronic myeloid leukemia | 1.07e-11 | 1 |
organ system cancer | 5.91e-11 | 137 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.