FFCP PHASE1:Hg19::chr18:9914210..9914254,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000037!4.97e-17!172;CL:0000566!4.97e-17!172;CL:0000738!6.74e-17!140;CL:0002032!4.22e-15!165;CL:0000837!4.22e-15!165;CL:0000988!9.28e-15!182;CL:0000763!3.65e-11!112;CL:0000049!3.65e-11!112;CL:0002031!8.19e-11!124;CL:0000766!6.37e-10!76;CL:0002320!7.72e-10!365;CL:0002087!1.00e-09!119;CL:0000134!2.50e-09!358;CL:0000791!9.08e-09!18;CL:0000789!9.08e-09!18;CL:0002420!9.08e-09!18;CL:0002419!9.08e-09!18;CL:0000790!9.08e-09!18;CL:0000557!2.66e-07!71;CL:0000084!6.20e-07!25;CL:0000827!6.20e-07!25 | |ontology_enrichment_celltype=CL:0000037!4.97e-17!172;CL:0000566!4.97e-17!172;CL:0000738!6.74e-17!140;CL:0002032!4.22e-15!165;CL:0000837!4.22e-15!165;CL:0000988!9.28e-15!182;CL:0000763!3.65e-11!112;CL:0000049!3.65e-11!112;CL:0002031!8.19e-11!124;CL:0000766!6.37e-10!76;CL:0002320!7.72e-10!365;CL:0002087!1.00e-09!119;CL:0000134!2.50e-09!358;CL:0000791!9.08e-09!18;CL:0000789!9.08e-09!18;CL:0002420!9.08e-09!18;CL:0002419!9.08e-09!18;CL:0000790!9.08e-09!18;CL:0000557!2.66e-07!71;CL:0000084!6.20e-07!25;CL:0000827!6.20e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000791;9.47e-09;18!CL:0000789;9.47e-09;18!CL:0002419;9.47e-09;18!CL:0000084;6.46e-07;25 | |ontology_enrichment_celltype_v019=CL:0000791;9.47e-09;18!CL:0000789;9.47e-09;18!CL:0002419;9.47e-09;18!CL:0000084;6.46e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.85e-17,168;CL:0000738,2.00e-17,136;CL:0000988,1.30e-15,177;CL:0002032,1.67e-15,161;CL:0000837,1.67e-15,161;CL:0000763,1.31e-11,108;CL:0000049,1.31e-11,108;CL:0002031,3.33e-11,120;CL:0000766,1.69e-10,72;CL:0002320,3.25e-10,361;CL:0002087,4.31e-10,115;CL:0000134,1.07e-09,354;CL:0000791,9.08e-09,18;CL:0000789,9.08e-09,18;CL:0002420,9.08e-09,18;CL:0002419,9.08e-09,18;CL:0000790,9.08e-09,18;CL:0000557,9.47e-08,67;CL:0000084,6.20e-07,25;CL:0000827,6.20e-07,25;CL:0002009,8.05e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000790;9.47e-09;18 | |ontology_enrichment_development_v019=CL:0000790;9.47e-09;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.11e-08!375;UBERON:0002390!2.42e-08!102;UBERON:0003061!2.42e-08!102;UBERON:0002193!7.33e-07!112 | |ontology_enrichment_uberon=UBERON:0002384!1.11e-08!375;UBERON:0002390!2.42e-08!102;UBERON:0003061!2.42e-08!102;UBERON:0002193!7.33e-07!112 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.02e-09,371;UBERON:0002390,1.04e-08,98;UBERON:0003061,1.04e-08,98;UBERON:0002193,3.88e-07,108 | |||
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| ||
|short_description=p2@VAPA | |short_description=p2@VAPA | ||
}} | }} |
Revision as of 17:55, 20 November 2012
Short description: | p2@VAPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_VAPA_5end |
Coexpression cluster: | NA |
Association with transcript: | 211bp_to_ENST00000340541, ENST00000400000_5end |
EntrezGene: | VAPA |
HGNC: | 12648 |
UniProt: | Q9P0L0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.85e-17 | 168 |
leukocyte | 2.00e-17 | 136 |
hematopoietic cell | 1.30e-15 | 177 |
hematopoietic oligopotent progenitor cell | 1.67e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.67e-15 | 161 |
myeloid cell | 1.31e-11 | 108 |
common myeloid progenitor | 1.31e-11 | 108 |
hematopoietic lineage restricted progenitor cell | 3.33e-11 | 120 |
myeloid leukocyte | 1.69e-10 | 72 |
connective tissue cell | 3.25e-10 | 361 |
nongranular leukocyte | 4.31e-10 | 115 |
mesenchymal cell | 1.07e-09 | 354 |
mature alpha-beta T cell | 9.08e-09 | 18 |
alpha-beta T cell | 9.08e-09 | 18 |
immature T cell | 9.08e-09 | 18 |
mature T cell | 9.08e-09 | 18 |
immature alpha-beta T cell | 9.08e-09 | 18 |
granulocyte monocyte progenitor cell | 9.47e-08 | 67 |
T cell | 6.20e-07 | 25 |
pro-T cell | 6.20e-07 | 25 |
macrophage dendritic cell progenitor | 8.05e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.02e-09 | 371 |
hematopoietic system | 1.04e-08 | 98 |
blood island | 1.04e-08 | 98 |
hemolymphoid system | 3.88e-07 | 108 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.