FFCP PHASE1:Hg19::chr19:12902603..12902655,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000766!1.74e-23!76;CL:0000738!1.05e-21!140;CL:0002057!9.06e-21!42;CL:0002009!1.98e-20!65;CL:0000860!9.91e-20!45;CL:0002194!1.16e-19!63;CL:0000576!1.16e-19!63;CL:0000040!1.16e-19!63;CL:0000559!1.16e-19!63;CL:0000557!2.75e-19!71;CL:0000839!6.47e-19!70;CL:0002087!7.41e-18!119;CL:0002031!5.39e-17!124;CL:0000037!1.01e-12!172;CL:0000566!1.01e-12!172;CL:0000988!4.72e-12!182;CL:0002032!8.58e-12!165;CL:0000837!8.58e-12!165;CL:0000763!1.94e-11!112;CL:0000049!1.94e-11!112 | |ontology_enrichment_celltype=CL:0000766!1.74e-23!76;CL:0000738!1.05e-21!140;CL:0002057!9.06e-21!42;CL:0002009!1.98e-20!65;CL:0000860!9.91e-20!45;CL:0002194!1.16e-19!63;CL:0000576!1.16e-19!63;CL:0000040!1.16e-19!63;CL:0000559!1.16e-19!63;CL:0000557!2.75e-19!71;CL:0000839!6.47e-19!70;CL:0002087!7.41e-18!119;CL:0002031!5.39e-17!124;CL:0000037!1.01e-12!172;CL:0000566!1.01e-12!172;CL:0000988!4.72e-12!182;CL:0002032!8.58e-12!165;CL:0000837!8.58e-12!165;CL:0000763!1.94e-11!112;CL:0000049!1.94e-11!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.11e-15;33!CL:0002057;6.11e-15;33!CL:0000473;2.64e-14;39!CL:0000234;2.64e-14;39!CL:0000576;2.61e-11;48!CL:0000766;5.56e-11;69 | |ontology_enrichment_celltype_v019=CL:0000860;6.11e-15;33!CL:0002057;6.11e-15;33!CL:0000473;2.64e-14;39!CL:0000234;2.64e-14;39!CL:0000576;2.61e-11;48!CL:0000766;5.56e-11;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.91e-24,72;CL:0000473,4.41e-23,48;CL:0000234,4.41e-23,48;CL:0000738,9.66e-22,136;CL:0002009,3.41e-21,61;CL:0000860,4.68e-21,42;CL:0002057,4.68e-21,42;CL:0002194,2.07e-20,59;CL:0000576,2.07e-20,59;CL:0000040,2.07e-20,59;CL:0000559,2.07e-20,59;CL:0000557,3.04e-20,67;CL:0000839,1.07e-19,66;CL:0002087,9.83e-18,115;CL:0002031,5.76e-17,120;CL:0000037,1.08e-12,168;CL:0000988,2.65e-12,177;CL:0000763,9.07e-12,108;CL:0000049,9.07e-12,108;CL:0002032,9.35e-12,161;CL:0000837,9.35e-12,161 | |||
|ontology_enrichment_development_v019=CL:0002057;2.23e-15;42 | |ontology_enrichment_development_v019=CL:0002057;2.23e-15;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.65e-22!102;UBERON:0003061!2.65e-22!102;UBERON:0002193!1.85e-19!112;UBERON:0002371!1.13e-17!80;UBERON:0001474!1.73e-15!86;UBERON:0004765!1.82e-12!101;UBERON:0001434!1.82e-12!101;UBERON:0002405!3.75e-12!115;UBERON:0003081!2.97e-07!216;UBERON:0000178!8.35e-07!15;UBERON:0000179!8.35e-07!15;UBERON:0000463!8.35e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!2.65e-22!102;UBERON:0003061!2.65e-22!102;UBERON:0002193!1.85e-19!112;UBERON:0002371!1.13e-17!80;UBERON:0001474!1.73e-15!86;UBERON:0004765!1.82e-12!101;UBERON:0001434!1.82e-12!101;UBERON:0002405!3.75e-12!115;UBERON:0003081!2.97e-07!216;UBERON:0000178!8.35e-07!15;UBERON:0000179!8.35e-07!15;UBERON:0000463!8.35e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.31e-07;15!UBERON:0000179;5.31e-07;15!UBERON:0000463;5.31e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;5.31e-07;15!UBERON:0000179;5.31e-07;15!UBERON:0000463;5.31e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.44e-23,98;UBERON:0003061,6.44e-23,98;UBERON:0002193,3.72e-20,108;UBERON:0002371,1.97e-18,76;UBERON:0001474,8.23e-16,82;UBERON:0004765,2.01e-15,90;UBERON:0002405,6.43e-15,93;UBERON:0001434,1.79e-13,100;UBERON:0003081,1.52e-07,203;UBERON:0000178,6.97e-07,15;UBERON:0000179,6.97e-07,15;UBERON:0000463,6.97e-07,15 | |||
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| ||
|short_description=p@chr19:12902603..12902655,- | |short_description=p@chr19:12902603..12902655,- | ||
}} | }} |
Revision as of 08:36, 21 November 2012
Short description: | p@chr19:12902603..12902655, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:12902603..12902655, - |
Coexpression cluster: | C1809_CD4_Peripheral_normal_Neutrophils_CD8_Natural_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.91e-24 | 72 |
defensive cell | 4.41e-23 | 48 |
phagocyte | 4.41e-23 | 48 |
leukocyte | 9.66e-22 | 136 |
macrophage dendritic cell progenitor | 3.41e-21 | 61 |
classical monocyte | 4.68e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.68e-21 | 42 |
monopoietic cell | 2.07e-20 | 59 |
monocyte | 2.07e-20 | 59 |
monoblast | 2.07e-20 | 59 |
promonocyte | 2.07e-20 | 59 |
granulocyte monocyte progenitor cell | 3.04e-20 | 67 |
myeloid lineage restricted progenitor cell | 1.07e-19 | 66 |
nongranular leukocyte | 9.83e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 5.76e-17 | 120 |
hematopoietic stem cell | 1.08e-12 | 168 |
hematopoietic cell | 2.65e-12 | 177 |
myeloid cell | 9.07e-12 | 108 |
common myeloid progenitor | 9.07e-12 | 108 |
hematopoietic oligopotent progenitor cell | 9.35e-12 | 161 |
hematopoietic multipotent progenitor cell | 9.35e-12 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.44e-23 | 98 |
blood island | 6.44e-23 | 98 |
hemolymphoid system | 3.72e-20 | 108 |
bone marrow | 1.97e-18 | 76 |
bone element | 8.23e-16 | 82 |
skeletal element | 2.01e-15 | 90 |
immune system | 6.43e-15 | 93 |
skeletal system | 1.79e-13 | 100 |
lateral plate mesoderm | 1.52e-07 | 203 |
blood | 6.97e-07 | 15 |
haemolymphatic fluid | 6.97e-07 | 15 |
organism substance | 6.97e-07 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.